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***  Apo AMPK  ***

<R2> analysis for 260711175133601569

---  normal mode 61  ---

This page gives a visualization of the normalized mean square displacement <R2> of all C-alpha atoms in the protein that are associated to this mode (black bars). The three components of the corresponding eigenvector are shown on the left (colored bars). Here is the raw data for <R2> and for the eigenvector (shift-click on the links for download).

XYZresidue<R2><R2>max = 0.0753
ARG 100.0177
VAL 110.0163
LYS 120.0124
ILE 130.0134
GLY 140.0136
HIS 150.0074
TYR 160.0062
ILE 170.0055
LEU 180.0062
GLY 190.0087
ASP 200.0127
THR 210.0126
LEU 220.0132
GLY 230.0132
VAL 240.0159
GLY 250.0089
THR 260.0159
PHE 270.0113
GLY 280.0133
LYS 290.0104
VAL 300.0084
LYS 310.0082
VAL 320.0079
GLY 330.0060
LYS 340.0039
HIS 350.0101
GLU 360.0091
LEU 370.0226
THR 380.0256
GLY 390.0144
HIS 400.0100
LYS 410.0084
VAL 420.0104
ALA 430.0078
VAL 440.0071
LYS 450.0100
ILE 460.0113
LEU 470.0146
ASN 480.0160
ARG 490.0106
GLN 500.0119
LYS 510.0179
ILE 520.0138
ARG 530.0314
SER 540.0480
LEU 550.0350
ASP 560.0229
VAL 570.0168
VAL 580.0147
GLY 590.0183
LYS 600.0167
ILE 610.0145
ARG 620.0152
ARG 630.0155
GLU 640.0126
ILE 650.0122
GLN 660.0142
ASN 670.0112
LEU 680.0078
LYS 690.0115
LEU 700.0135
PHE 710.0091
ARG 720.0105
HIS 730.0073
PRO 740.0088
HIS 750.0065
ILE 760.0032
ILE 770.0038
LYS 780.0030
LEU 790.0027
TYR 800.0029
GLN 810.0040
VAL 820.0075
ILE 830.0080
SER 840.0103
THR 850.0167
PRO 860.0181
SER 870.0189
ASP 880.0161
ILE 890.0129
PHE 900.0106
MET 910.0072
VAL 920.0044
MET 930.0060
GLU 940.0090
TYR 950.0109
VAL 960.0109
SER 970.0126
GLY 980.0131
GLY 990.0118
GLU 1000.0072
LEU 1010.0059
PHE 1020.0061
ASP 1030.0047
TYR 1040.0060
ILE 1050.0044
CYS 1060.0131
LYS 1070.0158
ASN 1080.0166
GLY 1090.0128
ARG 1100.0083
LEU 1110.0076
ASP 1120.0092
GLU 1130.0088
LYS 1140.0120
GLU 1150.0103
SER 1160.0082
ARG 1170.0086
ARG 1180.0067
LEU 1190.0066
PHE 1200.0065
GLN 1210.0055
GLN 1220.0051
ILE 1230.0050
LEU 1240.0045
SER 1250.0039
GLY 1260.0042
VAL 1270.0033
ASP 1280.0043
TYR 1290.0062
CYS 1300.0054
HIS 1310.0053
ARG 1320.0066
HIS 1330.0087
MET 1340.0084
VAL 1350.0072
VAL 1360.0061
HIS 1370.0055
ARG 1380.0068
ASP 1390.0066
LEU 1400.0047
LYS 1410.0054
PRO 1420.0050
GLU 1430.0052
ASN 1440.0045
VAL 1450.0058
LEU 1460.0066
LEU 1470.0070
ASP 1480.0130
ALA 1490.0232
HIS 1500.0205
MET 1510.0102
ASN 1520.0068
ALA 1530.0064
LYS 1540.0047
ILE 1550.0028
ALA 1560.0036
ASP 1570.0058
PHE 1580.0074
GLY 1590.0106
LEU 1600.0099
SER 1610.0092
ASN 1620.0104
MET 1630.0106
MET 1640.0073
SER 1650.0067
ASP 1660.0043
GLY 1670.0036
GLU 1680.0040
PHE 1690.0053
LEU 1700.0053
ARG 1710.0049
SER 1730.0064
CYS 1740.0074
GLY 1750.0068
SER 1760.0071
PRO 1770.0064
ASN 1780.0044
TYR 1790.0033
ALA 1800.0036
ALA 1810.0032
PRO 1820.0019
GLU 1830.0026
VAL 1840.0032
ILE 1850.0022
SER 1860.0029
GLY 1870.0032
ARG 1880.0038
LEU 1890.0041
TYR 1900.0042
ALA 1910.0048
GLY 1920.0046
PRO 1930.0041
GLU 1940.0032
VAL 1950.0030
ASP 1960.0028
ILE 1970.0025
TRP 1980.0016
SER 1990.0023
SER 2000.0025
GLY 2010.0009
VAL 2020.0013
ILE 2030.0028
LEU 2040.0018
TYR 2050.0023
ALA 2060.0034
LEU 2070.0040
LEU 2080.0023
CYS 2090.0053
GLY 2100.0063
THR 2110.0070
LEU 2120.0063
PRO 2130.0056
PHE 2140.0046
ASP 2150.0056
ASP 2160.0026
ASP 2170.0027
HIS 2180.0094
VAL 2190.0085
PRO 2200.0121
THR 2210.0093
LEU 2220.0044
PHE 2230.0045
LYS 2240.0072
LYS 2250.0062
ILE 2260.0034
CYS 2270.0051
ASP 2280.0051
GLY 2290.0071
ILE 2300.0109
PHE 2310.0102
TYR 2320.0161
THR 2330.0123
PRO 2340.0189
GLN 2350.0226
TYR 2360.0075
LEU 2370.0053
ASN 2380.0062
PRO 2390.0097
SER 2400.0102
VAL 2410.0058
ILE 2420.0068
SER 2430.0094
LEU 2440.0066
LEU 2450.0040
LYS 2460.0059
HIS 2470.0061
MET 2480.0031
LEU 2490.0023
GLN 2500.0038
VAL 2510.0024
ASP 2520.0031
PRO 2530.0037
MET 2540.0053
LYS 2550.0059
ARG 2560.0046
ALA 2570.0033
THR 2580.0037
ILE 2590.0043
LYS 2600.0049
ASP 2610.0052
ILE 2620.0054
ARG 2630.0062
GLU 2640.0089
HIS 2650.0094
GLU 2660.0136
TRP 2670.0108
PHE 2680.0095
LYS 2690.0142
GLN 2700.0148
ASP 2710.0169
LEU 2720.0168
PRO 2730.0066
LYS 2740.0089
TYR 2750.0128
LEU 2760.0085
PHE 2770.0086
PRO 2780.0249
GLU 2790.0412
ASP 2800.0500
ALA 3210.0430
VAL 3220.0475
ALA 3230.0753
TYR 3240.0497
HIS 3250.0573
LEU 3260.0417
ILE 3270.0247
ILE 3280.0349
ASP 3290.0373
ASN 3300.0668
ARG 3310.0625
ARG 3320.0446
ILE 3330.0338
MET 3340.0300
ASN 3350.0355
GLU 3360.0324
ALA 3370.0398
LYS 3380.0430
ASP 3390.0333
PHE 3400.0188
TYR 3410.0180
LEU 3420.0241
ALA 3430.0224
THR 3440.0266
SER 3450.0335
PRO 3460.0168
PRO 3470.0086
ASP 3480.0141
SER 3490.0187
PHE 3500.0220
LEU 3510.0320
ASP 3520.0185
ASP 3530.0337
HIS 3540.0095
HIS 3550.0297
LEU 3560.0400
THR 3570.0186
ARG 3580.0243
PRO 3590.0129
HIS 3600.0112
PRO 3610.0194
GLU 3620.0191
ARG 3630.0121
VAL 3640.0135
PRO 3650.0094
PHE 3660.0081
LEU 3670.0095
VAL 3680.0213
ALA 3690.0384
GLU 3700.0363
THR 3710.0260
PRO 3720.0278
ARG 3730.0187
ALA 3740.0399
ALA 3940.0326
LYS 3950.0246
TRP 3960.0142
HIS 3970.0097
LEU 3980.0053
GLY 3990.0100
ILE 4000.0077
ARG 4010.0048
SER 4020.0045
GLN 4030.0064
SER 4040.0073
ARG 4050.0050
PRO 4060.0018
ASN 4070.0039
ASP 4080.0062
ILE 4090.0055
MET 4100.0049
ALA 4110.0079
GLU 4120.0104
VAL 4130.0092
CYS 4140.0097
ARG 4150.0132
ALA 4160.0132
ILE 4170.0105
LYS 4180.0128
GLN 4190.0153
LEU 4200.0127
ASP 4210.0091
TYR 4220.0064
GLU 4230.0048
TRP 4240.0044
LYS 4250.0036
VAL 4260.0038
VAL 4270.0036
ASN 4280.0032
PRO 4290.0038
TYR 4300.0037
TYR 4310.0043
LEU 4320.0041
ARG 4330.0039
VAL 4340.0045
ARG 4350.0041
ARG 4360.0073
LYS 4370.0048
ASN 4380.0040
PRO 4390.0128
VAL 4400.0123
THR 4410.0103
SER 4420.0084
THR 4430.0044
PHE 4440.0038
SER 4450.0064
LYS 4460.0059
MET 4470.0063
SER 4480.0071
LEU 4490.0064
GLN 4500.0059
LEU 4510.0045
TYR 4520.0028
GLN 4530.0016
VAL 4540.0018
ASP 4550.0052
SER 4560.0082
ARG 4570.0072
THR 4580.0041
TYR 4590.0017
LEU 4600.0045
LEU 4610.0058
ASP 4620.0061
PHE 4630.0061
ARG 4640.0062
SER 4650.0067
ILE 4660.0073
ASP 4670.0083
ASP 4680.0082
GLU 4690.0097
ILE 4700.0094
LYS 2030.0095
SER 2040.0060
PRO 2050.0035
PRO 2060.0038
ILE 2070.0032
LEU 2080.0027
PRO 2090.0038
PRO 2100.0037
HIS 2110.0045
LEU 2120.0030
LEU 2130.0034
GLN 2140.0066
VAL 2150.0112
ILE 2160.0136
LEU 2170.0153
ASN 2180.0189
LYS 2190.0207
ASP 2200.0250
THR 2210.0233
ASN 2220.0145
ILE 2230.0081
SER 2240.0088
CYS 2250.0076
ASP 2260.0071
PRO 2270.0147
ALA 2280.0190
LEU 2290.0189
LEU 2300.0226
PRO 2310.0242
GLU 2320.0214
PRO 2330.0093
ASN 2340.0065
HIS 2350.0038
VAL 2360.0039
MET 2370.0017
LEU 2380.0009
ASN 2390.0036
HIS 2400.0032
LEU 2410.0034
TYR 2420.0041
ALA 2430.0096
LEU 2440.0161
SER 2450.0350
ILE 2460.0191
LYS 2470.0283
ASP 2480.0168
SER 2490.0173
VAL 2500.0152
MET 2510.0014
VAL 2520.0028
LEU 2530.0015
SER 2540.0020
ALA 2550.0011
THR 2560.0006
HIS 2570.0028
ARG 2580.0066
TYR 2590.0149
LYS 2600.0225
LYS 2610.0209
LYS 2620.0180
TYR 2630.0061
VAL 2640.0070
THR 2650.0052
THR 2660.0016
LEU 2670.0022
LEU 2680.0017
TYR 2690.0096
LYS 2700.0099
PRO 2710.0113
PRO 5280.0098
GLY 5290.0043
SER 5300.0098
HIS 5310.0073
THR 5320.0069
ILE 5330.0076
GLU 5340.0063
PHE 5350.0054
PHE 5360.0057
GLU 5370.0072
MET 5380.0065
CYS 5390.0070
ALA 5400.0102
ASN 5410.0095
LEU 5420.0095
ILE 5430.0110
LYS 5440.0146
ILE 5450.0138
LEU 5460.0124
ALA 5470.0162
GLN 5480.0210

If you find results from this site helpful for your research, please cite one of our papers:

elNémo is maintained by Yves-Henri Sanejouand.
It was developed by Karsten Suhre.
Between 2003 and 2014, it was hosted by IGS (Marseille).
Between 2015 and 2025, it was hosted by US2B (Nantes).
Last modification: april 24th, 2026.