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***  Apo AMPK  ***

<R2> analysis for 260711175133601569

---  normal mode 63  ---

This page gives a visualization of the normalized mean square displacement <R2> of all C-alpha atoms in the protein that are associated to this mode (black bars). The three components of the corresponding eigenvector are shown on the left (colored bars). Here is the raw data for <R2> and for the eigenvector (shift-click on the links for download).

XYZresidue<R2><R2>max = 0.0978
ARG 100.0108
VAL 110.0111
LYS 120.0089
ILE 130.0098
GLY 140.0094
HIS 150.0056
TYR 160.0052
ILE 170.0047
LEU 180.0064
GLY 190.0058
ASP 200.0082
THR 210.0090
LEU 220.0089
GLY 230.0094
VAL 240.0112
GLY 250.0050
THR 260.0059
PHE 270.0047
GLY 280.0081
LYS 290.0079
VAL 300.0068
LYS 310.0068
VAL 320.0061
GLY 330.0048
LYS 340.0030
HIS 350.0054
GLU 360.0035
LEU 370.0114
THR 380.0132
GLY 390.0063
HIS 400.0059
LYS 410.0056
VAL 420.0071
ALA 430.0051
VAL 440.0048
LYS 450.0051
ILE 460.0071
LEU 470.0071
ASN 480.0075
ARG 490.0021
GLN 500.0024
LYS 510.0066
ILE 520.0070
ARG 530.0151
SER 540.0241
LEU 550.0160
ASP 560.0122
VAL 570.0162
VAL 580.0169
GLY 590.0198
LYS 600.0159
ILE 610.0127
ARG 620.0143
ARG 630.0122
GLU 640.0078
ILE 650.0091
GLN 660.0087
ASN 670.0051
LEU 680.0051
LYS 690.0089
LEU 700.0089
PHE 710.0083
ARG 720.0102
HIS 730.0123
PRO 740.0106
HIS 750.0078
ILE 760.0058
ILE 770.0049
LYS 780.0047
LEU 790.0011
TYR 800.0023
GLN 810.0034
VAL 820.0037
ILE 830.0025
SER 840.0043
THR 850.0129
PRO 860.0179
SER 870.0145
ASP 880.0084
ILE 890.0050
PHE 900.0058
MET 910.0031
VAL 920.0024
MET 930.0031
GLU 940.0070
TYR 950.0072
VAL 960.0070
SER 970.0038
GLY 980.0045
GLY 990.0066
GLU 1000.0057
LEU 1010.0056
PHE 1020.0064
ASP 1030.0067
TYR 1040.0048
ILE 1050.0053
CYS 1060.0120
LYS 1070.0123
ASN 1080.0092
GLY 1090.0057
ARG 1100.0056
LEU 1110.0062
ASP 1120.0134
GLU 1130.0148
LYS 1140.0146
GLU 1150.0093
SER 1160.0064
ARG 1170.0092
ARG 1180.0051
LEU 1190.0029
PHE 1200.0058
GLN 1210.0039
GLN 1220.0039
ILE 1230.0058
LEU 1240.0077
SER 1250.0085
GLY 1260.0110
VAL 1270.0085
ASP 1280.0129
TYR 1290.0127
CYS 1300.0078
HIS 1310.0108
ARG 1320.0158
HIS 1330.0080
MET 1340.0058
VAL 1350.0032
VAL 1360.0023
HIS 1370.0014
ARG 1380.0038
ASP 1390.0051
LEU 1400.0048
LYS 1410.0065
PRO 1420.0068
GLU 1430.0070
ASN 1440.0055
VAL 1450.0055
LEU 1460.0042
LEU 1470.0027
ASP 1480.0069
ALA 1490.0163
HIS 1500.0187
MET 1510.0079
ASN 1520.0055
ALA 1530.0033
LYS 1540.0039
ILE 1550.0040
ALA 1560.0042
ASP 1570.0027
PHE 1580.0032
GLY 1590.0064
LEU 1600.0075
SER 1610.0056
ASN 1620.0064
MET 1630.0039
MET 1640.0045
SER 1650.0038
ASP 1660.0026
GLY 1670.0036
GLU 1680.0048
PHE 1690.0102
LEU 1700.0128
ARG 1710.0195
SER 1730.0174
CYS 1740.0152
GLY 1750.0081
SER 1760.0155
PRO 1770.0137
ASN 1780.0096
TYR 1790.0067
ALA 1800.0073
ALA 1810.0061
PRO 1820.0124
GLU 1830.0148
VAL 1840.0146
ILE 1850.0210
SER 1860.0266
GLY 1870.0289
ARG 1880.0265
LEU 1890.0195
TYR 1900.0137
ALA 1910.0091
GLY 1920.0045
PRO 1930.0045
GLU 1940.0030
VAL 1950.0018
ASP 1960.0010
ILE 1970.0057
TRP 1980.0037
SER 1990.0067
SER 2000.0082
GLY 2010.0081
VAL 2020.0084
ILE 2030.0097
LEU 2040.0097
TYR 2050.0097
ALA 2060.0096
LEU 2070.0076
LEU 2080.0091
CYS 2090.0091
GLY 2100.0092
THR 2110.0122
LEU 2120.0138
PRO 2130.0117
PHE 2140.0083
ASP 2150.0177
ASP 2160.0221
ASP 2170.0338
HIS 2180.0032
VAL 2190.0181
PRO 2200.0339
THR 2210.0235
LEU 2220.0103
PHE 2230.0183
LYS 2240.0276
LYS 2250.0209
ILE 2260.0114
CYS 2270.0146
ASP 2280.0161
GLY 2290.0112
ILE 2300.0096
PHE 2310.0090
TYR 2320.0160
THR 2330.0099
PRO 2340.0109
GLN 2350.0107
TYR 2360.0132
LEU 2370.0127
ASN 2380.0186
PRO 2390.0238
SER 2400.0236
VAL 2410.0171
ILE 2420.0150
SER 2430.0178
LEU 2440.0153
LEU 2450.0111
LYS 2460.0101
HIS 2470.0107
MET 2480.0077
LEU 2490.0047
GLN 2500.0021
VAL 2510.0057
ASP 2520.0067
PRO 2530.0052
MET 2540.0036
LYS 2550.0042
ARG 2560.0025
ALA 2570.0130
THR 2580.0150
ILE 2590.0132
LYS 2600.0240
ASP 2610.0230
ILE 2620.0167
ARG 2630.0140
GLU 2640.0197
HIS 2650.0218
GLU 2660.0263
TRP 2670.0218
PHE 2680.0142
LYS 2690.0126
GLN 2700.0217
ASP 2710.0234
LEU 2720.0213
PRO 2730.0278
LYS 2740.0324
TYR 2750.0345
LEU 2760.0222
PHE 2770.0250
PRO 2780.0420
GLU 2790.0384
ASP 2800.0510
ALA 3210.0094
VAL 3220.0046
ALA 3230.0052
TYR 3240.0044
HIS 3250.0029
LEU 3260.0065
ILE 3270.0036
ILE 3280.0035
ASP 3290.0058
ASN 3300.0040
ARG 3310.0028
ARG 3320.0027
ILE 3330.0087
MET 3340.0065
ASN 3350.0073
GLU 3360.0123
ALA 3370.0142
LYS 3380.0154
ASP 3390.0087
PHE 3400.0169
TYR 3410.0192
LEU 3420.0104
ALA 3430.0019
THR 3440.0055
SER 3450.0063
PRO 3460.0078
PRO 3470.0082
ASP 3480.0132
SER 3490.0093
PHE 3500.0074
LEU 3510.0208
ASP 3520.0042
ASP 3530.0230
HIS 3540.0023
HIS 3550.0104
LEU 3560.0114
THR 3570.0119
ARG 3580.0200
PRO 3590.0081
HIS 3600.0096
PRO 3610.0079
GLU 3620.0056
ARG 3630.0046
VAL 3640.0034
PRO 3650.0014
PHE 3660.0059
LEU 3670.0066
VAL 3680.0069
ALA 3690.0090
GLU 3700.0096
THR 3710.0092
PRO 3720.0130
ARG 3730.0075
ALA 3740.0153
ALA 3940.0055
LYS 3950.0056
TRP 3960.0059
HIS 3970.0019
LEU 3980.0031
GLY 3990.0035
ILE 4000.0171
ARG 4010.0142
SER 4020.0134
GLN 4030.0168
SER 4040.0283
ARG 4050.0311
PRO 4060.0164
ASN 4070.0171
ASP 4080.0211
ILE 4090.0107
MET 4100.0051
ALA 4110.0059
GLU 4120.0121
VAL 4130.0116
CYS 4140.0125
ARG 4150.0110
ALA 4160.0107
ILE 4170.0108
LYS 4180.0110
GLN 4190.0104
LEU 4200.0103
ASP 4210.0109
TYR 4220.0108
GLU 4230.0122
TRP 4240.0151
LYS 4250.0155
VAL 4260.0127
VAL 4270.0064
ASN 4280.0038
PRO 4290.0101
TYR 4300.0077
TYR 4310.0014
LEU 4320.0077
ARG 4330.0127
VAL 4340.0118
ARG 4350.0127
ARG 4360.0099
LYS 4370.0069
ASN 4380.0102
PRO 4390.0265
VAL 4400.0306
THR 4410.0255
SER 4420.0165
THR 4430.0098
PHE 4440.0033
SER 4450.0073
LYS 4460.0102
MET 4470.0101
SER 4480.0081
LEU 4490.0063
GLN 4500.0041
LEU 4510.0048
TYR 4520.0087
GLN 4530.0096
VAL 4540.0165
ASP 4550.0157
SER 4560.0119
ARG 4570.0043
THR 4580.0085
TYR 4590.0043
LEU 4600.0083
LEU 4610.0065
ASP 4620.0065
PHE 4630.0042
ARG 4640.0051
SER 4650.0068
ILE 4660.0155
ASP 4670.0208
ASP 4680.0266
GLU 4690.0373
ILE 4700.0131
LYS 2030.0845
SER 2040.0471
PRO 2050.0218
PRO 2060.0207
ILE 2070.0210
LEU 2080.0206
PRO 2090.0150
PRO 2100.0158
HIS 2110.0121
LEU 2120.0076
LEU 2130.0116
GLN 2140.0105
VAL 2150.0068
ILE 2160.0063
LEU 2170.0057
ASN 2180.0044
LYS 2190.0037
ASP 2200.0027
THR 2210.0076
ASN 2220.0079
ILE 2230.0095
SER 2240.0109
CYS 2250.0101
ASP 2260.0101
PRO 2270.0099
ALA 2280.0080
LEU 2290.0046
LEU 2300.0052
PRO 2310.0092
GLU 2320.0132
PRO 2330.0110
ASN 2340.0088
HIS 2350.0062
VAL 2360.0053
MET 2370.0059
LEU 2380.0048
ASN 2390.0044
HIS 2400.0027
LEU 2410.0029
TYR 2420.0044
ALA 2430.0046
LEU 2440.0050
SER 2450.0177
ILE 2460.0122
LYS 2470.0187
ASP 2480.0187
SER 2490.0112
VAL 2500.0114
MET 2510.0055
VAL 2520.0069
LEU 2530.0062
SER 2540.0069
ALA 2550.0069
THR 2560.0071
HIS 2570.0108
ARG 2580.0104
TYR 2590.0119
LYS 2600.0164
LYS 2610.0153
LYS 2620.0103
TYR 2630.0093
VAL 2640.0091
THR 2650.0087
THR 2660.0085
LEU 2670.0082
LEU 2680.0074
TYR 2690.0081
LYS 2700.0071
PRO 2710.0091
PRO 5280.0608
GLY 5290.0298
SER 5300.0178
HIS 5310.0144
THR 5320.0156
ILE 5330.0142
GLU 5340.0097
PHE 5350.0071
PHE 5360.0063
GLU 5370.0064
MET 5380.0023
CYS 5390.0028
ALA 5400.0060
ASN 5410.0085
LEU 5420.0073
ILE 5430.0170
LYS 5440.0261
ILE 5450.0267
LEU 5460.0353
ALA 5470.0634
GLN 5480.0978

If you find results from this site helpful for your research, please cite one of our papers:

elNémo is maintained by Yves-Henri Sanejouand.
It was developed by Karsten Suhre.
Between 2003 and 2014, it was hosted by IGS (Marseille).
Between 2015 and 2025, it was hosted by US2B (Nantes).
Last modification: april 24th, 2026.