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***  Apo AMPK  ***

<R2> analysis for 260711175133601569

---  normal mode 69  ---

This page gives a visualization of the normalized mean square displacement <R2> of all C-alpha atoms in the protein that are associated to this mode (black bars). The three components of the corresponding eigenvector are shown on the left (colored bars). Here is the raw data for <R2> and for the eigenvector (shift-click on the links for download).

XYZresidue<R2><R2>max = 0.0880
ARG 100.0156
VAL 110.0142
LYS 120.0113
ILE 130.0175
GLY 140.0182
HIS 150.0136
TYR 160.0121
ILE 170.0092
LEU 180.0157
GLY 190.0174
ASP 200.0241
THR 210.0239
LEU 220.0248
GLY 230.0258
VAL 240.0312
GLY 250.0159
THR 260.0131
PHE 270.0107
GLY 280.0174
LYS 290.0186
VAL 300.0186
LYS 310.0178
VAL 320.0170
GLY 330.0146
LYS 340.0114
HIS 350.0115
GLU 360.0087
LEU 370.0226
THR 380.0162
GLY 390.0056
HIS 400.0141
LYS 410.0150
VAL 420.0159
ALA 430.0132
VAL 440.0130
LYS 450.0117
ILE 460.0115
LEU 470.0093
ASN 480.0091
ARG 490.0048
GLN 500.0095
LYS 510.0114
ILE 520.0102
ARG 530.0078
SER 540.0111
LEU 550.0136
ASP 560.0151
VAL 570.0161
VAL 580.0183
GLY 590.0189
LYS 600.0134
ILE 610.0107
ARG 620.0142
ARG 630.0117
GLU 640.0071
ILE 650.0084
GLN 660.0077
ASN 670.0077
LEU 680.0073
LYS 690.0076
LEU 700.0096
PHE 710.0111
ARG 720.0126
HIS 730.0157
PRO 740.0137
HIS 750.0148
ILE 760.0133
ILE 770.0111
LYS 780.0093
LEU 790.0013
TYR 800.0059
GLN 810.0094
VAL 820.0099
ILE 830.0057
SER 840.0048
THR 850.0167
PRO 860.0280
SER 870.0216
ASP 880.0082
ILE 890.0021
PHE 900.0088
MET 910.0098
VAL 920.0099
MET 930.0076
GLU 940.0079
TYR 950.0070
VAL 960.0100
SER 970.0385
GLY 980.0425
GLY 990.0297
GLU 1000.0207
LEU 1010.0122
PHE 1020.0201
ASP 1030.0198
TYR 1040.0130
ILE 1050.0229
CYS 1060.0458
LYS 1070.0422
ASN 1080.0408
GLY 1090.0258
ARG 1100.0177
LEU 1110.0118
ASP 1120.0121
GLU 1130.0058
LYS 1140.0111
GLU 1150.0106
SER 1160.0087
ARG 1170.0056
ARG 1180.0061
LEU 1190.0054
PHE 1200.0052
GLN 1210.0048
GLN 1220.0065
ILE 1230.0083
LEU 1240.0058
SER 1250.0070
GLY 1260.0097
VAL 1270.0087
ASP 1280.0095
TYR 1290.0103
CYS 1300.0092
HIS 1310.0113
ARG 1320.0122
HIS 1330.0094
MET 1340.0074
VAL 1350.0069
VAL 1360.0039
HIS 1370.0038
ARG 1380.0033
ASP 1390.0035
LEU 1400.0032
LYS 1410.0039
PRO 1420.0094
GLU 1430.0151
ASN 1440.0148
VAL 1450.0118
LEU 1460.0186
LEU 1470.0233
ASP 1480.0434
ALA 1490.0880
HIS 1500.0825
MET 1510.0289
ASN 1520.0244
ALA 1530.0135
LYS 1540.0173
ILE 1550.0130
ALA 1560.0118
ASP 1570.0076
PHE 1580.0055
GLY 1590.0057
LEU 1600.0057
SER 1610.0045
ASN 1620.0043
MET 1630.0049
MET 1640.0026
SER 1650.0041
ASP 1660.0050
GLY 1670.0059
GLU 1680.0052
PHE 1690.0061
LEU 1700.0059
ARG 1710.0066
SER 1730.0054
CYS 1740.0039
GLY 1750.0046
SER 1760.0069
PRO 1770.0077
ASN 1780.0101
TYR 1790.0077
ALA 1800.0086
ALA 1810.0100
PRO 1820.0114
GLU 1830.0110
VAL 1840.0098
ILE 1850.0105
SER 1860.0097
GLY 1870.0093
ARG 1880.0078
LEU 1890.0076
TYR 1900.0080
ALA 1910.0070
GLY 1920.0054
PRO 1930.0055
GLU 1940.0084
VAL 1950.0063
ASP 1960.0034
ILE 1970.0074
TRP 1980.0077
SER 1990.0063
SER 2000.0066
GLY 2010.0074
VAL 2020.0070
ILE 2030.0074
LEU 2040.0059
TYR 2050.0058
ALA 2060.0080
LEU 2070.0076
LEU 2080.0073
CYS 2090.0103
GLY 2100.0094
THR 2110.0102
LEU 2120.0107
PRO 2130.0113
PHE 2140.0115
ASP 2150.0195
ASP 2160.0192
ASP 2170.0227
HIS 2180.0249
VAL 2190.0230
PRO 2200.0192
THR 2210.0135
LEU 2220.0149
PHE 2230.0117
LYS 2240.0122
LYS 2250.0137
ILE 2260.0137
CYS 2270.0137
ASP 2280.0143
GLY 2290.0137
ILE 2300.0129
PHE 2310.0114
TYR 2320.0143
THR 2330.0167
PRO 2340.0410
GLN 2350.0570
TYR 2360.0227
LEU 2370.0188
ASN 2380.0190
PRO 2390.0195
SER 2400.0153
VAL 2410.0090
ILE 2420.0123
SER 2430.0108
LEU 2440.0051
LEU 2450.0024
LYS 2460.0020
HIS 2470.0022
MET 2480.0061
LEU 2490.0076
GLN 2500.0095
VAL 2510.0135
ASP 2520.0145
PRO 2530.0135
MET 2540.0136
LYS 2550.0113
ARG 2560.0090
ALA 2570.0036
THR 2580.0033
ILE 2590.0043
LYS 2600.0042
ASP 2610.0049
ILE 2620.0041
ARG 2630.0093
GLU 2640.0099
HIS 2650.0070
GLU 2660.0096
TRP 2670.0047
PHE 2680.0046
LYS 2690.0109
GLN 2700.0096
ASP 2710.0149
LEU 2720.0149
PRO 2730.0243
LYS 2740.0326
TYR 2750.0242
LEU 2760.0168
PHE 2770.0220
PRO 2780.0357
GLU 2790.0424
ASP 2800.0450
ALA 3210.0131
VAL 3220.0138
ALA 3230.0245
TYR 3240.0179
HIS 3250.0207
LEU 3260.0113
ILE 3270.0084
ILE 3280.0163
ASP 3290.0168
ASN 3300.0220
ARG 3310.0194
ARG 3320.0123
ILE 3330.0103
MET 3340.0088
ASN 3350.0264
GLU 3360.0299
ALA 3370.0227
LYS 3380.0259
ASP 3390.0090
PHE 3400.0048
TYR 3410.0168
LEU 3420.0158
ALA 3430.0058
THR 3440.0106
SER 3450.0254
PRO 3460.0228
PRO 3470.0263
ASP 3480.0135
SER 3490.0116
PHE 3500.0289
LEU 3510.0182
ASP 3520.0173
ASP 3530.0160
HIS 3540.0427
HIS 3550.0434
LEU 3560.0156
THR 3570.0148
ARG 3580.0144
PRO 3590.0094
HIS 3600.0093
PRO 3610.0136
GLU 3620.0139
ARG 3630.0114
VAL 3640.0113
PRO 3650.0089
PHE 3660.0073
LEU 3670.0088
VAL 3680.0137
ALA 3690.0185
GLU 3700.0142
THR 3710.0133
PRO 3720.0264
ARG 3730.0057
ALA 3740.0137
ALA 3940.0197
LYS 3950.0152
TRP 3960.0108
HIS 3970.0043
LEU 3980.0029
GLY 3990.0030
ILE 4000.0074
ARG 4010.0076
SER 4020.0081
GLN 4030.0120
SER 4040.0048
ARG 4050.0105
PRO 4060.0084
ASN 4070.0090
ASP 4080.0083
ILE 4090.0051
MET 4100.0045
ALA 4110.0053
GLU 4120.0037
VAL 4130.0011
CYS 4140.0023
ARG 4150.0049
ALA 4160.0041
ILE 4170.0045
LYS 4180.0066
GLN 4190.0083
LEU 4200.0089
ASP 4210.0086
TYR 4220.0070
GLU 4230.0063
TRP 4240.0043
LYS 4250.0044
VAL 4260.0045
VAL 4270.0072
ASN 4280.0083
PRO 4290.0080
TYR 4300.0061
TYR 4310.0054
LEU 4320.0036
ARG 4330.0054
VAL 4340.0052
ARG 4350.0075
ARG 4360.0099
LYS 4370.0075
ASN 4380.0087
PRO 4390.0200
VAL 4400.0219
THR 4410.0134
SER 4420.0093
THR 4430.0054
PHE 4440.0075
SER 4450.0083
LYS 4460.0068
MET 4470.0051
SER 4480.0038
LEU 4490.0025
GLN 4500.0039
LEU 4510.0043
TYR 4520.0037
GLN 4530.0050
VAL 4540.0087
ASP 4550.0145
SER 4560.0173
ARG 4570.0146
THR 4580.0119
TYR 4590.0074
LEU 4600.0034
LEU 4610.0032
ASP 4620.0033
PHE 4630.0020
ARG 4640.0021
SER 4650.0019
ILE 4660.0070
ASP 4670.0100
ASP 4680.0118
GLU 4690.0174
ILE 4700.0031
LYS 2030.0144
SER 2040.0091
PRO 2050.0056
PRO 2060.0033
ILE 2070.0018
LEU 2080.0028
PRO 2090.0075
PRO 2100.0093
HIS 2110.0096
LEU 2120.0078
LEU 2130.0093
GLN 2140.0122
VAL 2150.0134
ILE 2160.0141
LEU 2170.0158
ASN 2180.0192
LYS 2190.0203
ASP 2200.0238
THR 2210.0099
ASN 2220.0060
ILE 2230.0037
SER 2240.0029
CYS 2250.0029
ASP 2260.0093
PRO 2270.0129
ALA 2280.0181
LEU 2290.0123
LEU 2300.0065
PRO 2310.0033
GLU 2320.0021
PRO 2330.0076
ASN 2340.0067
HIS 2350.0061
VAL 2360.0064
MET 2370.0071
LEU 2380.0068
ASN 2390.0034
HIS 2400.0033
LEU 2410.0031
TYR 2420.0068
ALA 2430.0078
LEU 2440.0096
SER 2450.0199
ILE 2460.0098
LYS 2470.0204
ASP 2480.0214
SER 2490.0211
VAL 2500.0127
MET 2510.0042
VAL 2520.0053
LEU 2530.0071
SER 2540.0074
ALA 2550.0070
THR 2560.0083
HIS 2570.0080
ARG 2580.0068
TYR 2590.0106
LYS 2600.0118
LYS 2610.0052
LYS 2620.0079
TYR 2630.0084
VAL 2640.0114
THR 2650.0128
THR 2660.0102
LEU 2670.0093
LEU 2680.0081
TYR 2690.0079
LYS 2700.0087
PRO 2710.0130
PRO 5280.0052
GLY 5290.0052
SER 5300.0081
HIS 5310.0055
THR 5320.0039
ILE 5330.0052
GLU 5340.0047
PHE 5350.0033
PHE 5360.0031
GLU 5370.0016
MET 5380.0034
CYS 5390.0033
ALA 5400.0035
ASN 5410.0037
LEU 5420.0039
ILE 5430.0060
LYS 5440.0091
ILE 5450.0078
LEU 5460.0096
ALA 5470.0178
GLN 5480.0291

If you find results from this site helpful for your research, please cite one of our papers:

elNémo is maintained by Yves-Henri Sanejouand.
It was developed by Karsten Suhre.
Between 2003 and 2014, it was hosted by IGS (Marseille).
Between 2015 and 2025, it was hosted by US2B (Nantes).
Last modification: april 24th, 2026.