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***  Apo AMPK  ***

<R2> analysis for 260711175133601569

---  normal mode 7  ---

This page gives a visualization of the normalized mean square displacement <R2> of all C-alpha atoms in the protein that are associated to this mode (black bars). The three components of the corresponding eigenvector are shown on the left (colored bars). Here is the raw data for <R2> and for the eigenvector (shift-click on the links for download).

XYZresidue<R2><R2>max = 0.2154
ARG 100.0093
VAL 110.0091
LYS 120.0092
ILE 130.0089
GLY 140.0096
HIS 150.0098
TYR 160.0088
ILE 170.0089
LEU 180.0079
GLY 190.0076
ASP 200.0067
THR 210.0059
LEU 220.0051
GLY 230.0046
VAL 240.0040
GLY 250.0041
THR 260.0037
PHE 270.0046
GLY 280.0053
LYS 290.0054
VAL 300.0054
LYS 310.0062
VAL 320.0066
GLY 330.0075
LYS 340.0084
HIS 350.0092
GLU 360.0100
LEU 370.0106
THR 380.0101
GLY 390.0093
HIS 400.0086
LYS 410.0076
VAL 420.0069
ALA 430.0061
VAL 440.0062
LYS 450.0056
ILE 460.0063
LEU 470.0063
ASN 480.0072
ARG 490.0076
GLN 500.0079
LYS 510.0069
ILE 520.0064
ARG 530.0072
SER 540.0073
LEU 550.0064
ASP 560.0061
VAL 570.0053
VAL 580.0058
GLY 590.0051
LYS 600.0043
ILE 610.0046
ARG 620.0049
ARG 630.0039
GLU 640.0037
ILE 650.0045
GLN 660.0042
ASN 670.0034
LEU 680.0039
LYS 690.0047
LEU 700.0044
PHE 710.0040
ARG 720.0046
HIS 730.0044
PRO 740.0048
HIS 750.0041
ILE 760.0039
ILE 770.0044
LYS 780.0050
LEU 790.0053
TYR 800.0063
GLN 810.0067
VAL 820.0067
ILE 830.0076
SER 840.0079
THR 850.0088
PRO 860.0092
SER 870.0087
ASP 880.0078
ILE 890.0071
PHE 900.0069
MET 910.0060
VAL 920.0064
MET 930.0058
GLU 940.0059
TYR 950.0059
VAL 960.0056
SER 970.0056
GLY 980.0049
GLY 990.0041
GLU 1000.0033
LEU 1010.0033
PHE 1020.0026
ASP 1030.0032
TYR 1040.0038
ILE 1050.0033
CYS 1060.0031
LYS 1070.0039
ASN 1080.0045
GLY 1090.0044
ARG 1100.0040
LEU 1110.0045
ASP 1120.0052
GLU 1130.0053
LYS 1140.0057
GLU 1150.0051
SER 1160.0043
ARG 1170.0045
ARG 1180.0048
LEU 1190.0041
PHE 1200.0036
GLN 1210.0040
GLN 1220.0040
ILE 1230.0032
LEU 1240.0029
SER 1250.0033
GLY 1260.0030
VAL 1270.0021
ASP 1280.0024
TYR 1290.0027
CYS 1300.0021
HIS 1310.0014
ARG 1320.0019
HIS 1330.0021
MET 1340.0014
VAL 1350.0017
VAL 1360.0013
HIS 1370.0014
ARG 1380.0012
ASP 1390.0012
LEU 1400.0013
LYS 1410.0014
PRO 1420.0021
GLU 1430.0022
ASN 1440.0024
VAL 1450.0029
LEU 1460.0037
LEU 1470.0045
ASP 1480.0054
ALA 1490.0061
HIS 1500.0062
MET 1510.0053
ASN 1520.0050
ALA 1530.0041
LYS 1540.0039
ILE 1550.0031
ALA 1560.0033
ASP 1570.0029
PHE 1580.0028
GLY 1590.0030
LEU 1600.0023
SER 1610.0021
ASN 1620.0021
MET 1630.0020
MET 1640.0014
SER 1650.0016
ASP 1660.0018
GLY 1670.0019
GLU 1680.0019
PHE 1690.0020
LEU 1700.0020
ARG 1710.0022
SER 1730.0022
CYS 1740.0020
GLY 1750.0014
SER 1760.0012
PRO 1770.0014
ASN 1780.0011
TYR 1790.0009
ALA 1800.0011
ALA 1810.0015
PRO 1820.0022
GLU 1830.0022
VAL 1840.0020
ILE 1850.0024
SER 1860.0028
GLY 1870.0028
ARG 1880.0025
LEU 1890.0022
TYR 1900.0017
ALA 1910.0015
GLY 1920.0010
PRO 1930.0008
GLU 1940.0011
VAL 1950.0010
ASP 1960.0008
ILE 1970.0014
TRP 1980.0015
SER 1990.0011
SER 2000.0018
GLY 2010.0022
VAL 2020.0019
ILE 2030.0021
LEU 2040.0029
TYR 2050.0029
ALA 2060.0026
LEU 2070.0033
LEU 2080.0038
CYS 2090.0035
GLY 2100.0030
THR 2110.0024
LEU 2120.0019
PRO 2130.0024
PHE 2140.0021
ASP 2150.0019
ASP 2160.0023
ASP 2170.0022
HIS 2180.0029
VAL 2190.0027
PRO 2200.0034
THR 2210.0034
LEU 2220.0026
PHE 2230.0027
LYS 2240.0034
LYS 2250.0031
ILE 2260.0026
CYS 2270.0031
ASP 2280.0037
GLY 2290.0035
ILE 2300.0038
PHE 2310.0036
TYR 2320.0040
THR 2330.0043
PRO 2340.0047
GLN 2350.0055
TYR 2360.0056
LEU 2370.0051
ASN 2380.0055
PRO 2390.0056
SER 2400.0054
VAL 2410.0046
ILE 2420.0045
SER 2430.0046
LEU 2440.0039
LEU 2450.0033
LYS 2460.0036
HIS 2470.0033
MET 2480.0026
LEU 2490.0025
GLN 2500.0029
VAL 2510.0028
ASP 2520.0029
PRO 2530.0020
MET 2540.0022
LYS 2550.0028
ARG 2560.0023
ALA 2570.0026
THR 2580.0023
ILE 2590.0024
LYS 2600.0029
ASP 2610.0033
ILE 2620.0034
ARG 2630.0038
GLU 2640.0043
HIS 2650.0045
GLU 2660.0054
TRP 2670.0051
PHE 2680.0046
LYS 2690.0052
GLN 2700.0058
ASP 2710.0061
LEU 2720.0056
PRO 2730.0057
LYS 2740.0054
TYR 2750.0052
LEU 2760.0044
PHE 2770.0037
PRO 2780.0027
GLU 2790.0035
ASP 2800.0042
ALA 3210.2154
VAL 3220.1854
ALA 3230.1553
TYR 3240.1337
HIS 3250.1226
LEU 3260.1141
ILE 3270.0974
ILE 3280.0764
ASP 3290.0728
ASN 3300.0608
ARG 3310.0430
ARG 3320.0303
ILE 3330.0328
MET 3340.0191
ASN 3350.0088
GLU 3360.0186
ALA 3370.0166
LYS 3380.0087
ASP 3390.0067
PHE 3400.0062
TYR 3410.0061
LEU 3420.0040
ALA 3430.0030
THR 3440.0054
SER 3450.0066
PRO 3460.0081
PRO 3470.0112
ASP 3480.0137
SER 3490.0180
PHE 3500.0191
LEU 3510.0238
ASP 3520.0235
ASP 3530.0264
HIS 3540.0229
HIS 3550.0182
LEU 3560.0163
THR 3570.0115
ARG 3580.0090
PRO 3590.0079
HIS 3600.0053
PRO 3610.0068
GLU 3620.0074
ARG 3630.0083
VAL 3640.0110
PRO 3650.0139
PHE 3660.0133
LEU 3670.0129
VAL 3680.0157
ALA 3690.0181
GLU 3700.0174
THR 3710.0173
PRO 3720.0201
ARG 3730.0234
ALA 3740.0214
ALA 3940.0023
LYS 3950.0020
TRP 3960.0017
HIS 3970.0014
LEU 3980.0014
GLY 3990.0016
ILE 4000.0016
ARG 4010.0015
SER 4020.0016
GLN 4030.0016
SER 4040.0019
ARG 4050.0022
PRO 4060.0024
ASN 4070.0028
ASP 4080.0026
ILE 4090.0024
MET 4100.0027
ALA 4110.0030
GLU 4120.0028
VAL 4130.0027
CYS 4140.0031
ARG 4150.0032
ALA 4160.0030
ILE 4170.0032
LYS 4180.0036
GLN 4190.0036
LEU 4200.0035
ASP 4210.0038
TYR 4220.0036
GLU 4230.0038
TRP 4240.0035
LYS 4250.0037
VAL 4260.0036
VAL 4270.0036
ASN 4280.0035
PRO 4290.0033
TYR 4300.0029
TYR 4310.0029
LEU 4320.0031
ARG 4330.0032
VAL 4340.0031
ARG 4350.0033
ARG 4360.0034
LYS 4370.0037
ASN 4380.0035
PRO 4390.0039
VAL 4400.0039
THR 4410.0037
SER 4420.0039
THR 4430.0035
PHE 4440.0035
SER 4450.0030
LYS 4460.0029
MET 4470.0026
SER 4480.0026
LEU 4490.0024
GLN 4500.0024
LEU 4510.0023
TYR 4520.0022
GLN 4530.0021
VAL 4540.0018
ASP 4550.0018
SER 4560.0021
ARG 4570.0018
THR 4580.0017
TYR 4590.0018
LEU 4600.0017
LEU 4610.0019
ASP 4620.0019
PHE 4630.0019
ARG 4640.0020
SER 4650.0021
ILE 4660.0025
ASP 4670.0026
ASP 4680.0031
GLU 4690.0034
ILE 4700.0040
LYS 2030.0035
SER 2040.0030
PRO 2050.0027
PRO 2060.0027
ILE 2070.0025
LEU 2080.0022
PRO 2090.0022
PRO 2100.0021
HIS 2110.0017
LEU 2120.0017
LEU 2130.0017
GLN 2140.0016
VAL 2150.0017
ILE 2160.0018
LEU 2170.0018
ASN 2180.0024
LYS 2190.0028
ASP 2200.0040
THR 2210.0045
ASN 2220.0059
ILE 2230.0068
SER 2240.0053
CYS 2250.0028
ASP 2260.0020
PRO 2270.0042
ALA 2280.0039
LEU 2290.0016
LEU 2300.0017
PRO 2310.0024
GLU 2320.0029
PRO 2330.0021
ASN 2340.0018
HIS 2350.0017
VAL 2360.0017
MET 2370.0016
LEU 2380.0016
ASN 2390.0016
HIS 2400.0016
LEU 2410.0015
TYR 2420.0015
ALA 2430.0016
LEU 2440.0018
SER 2450.0020
ILE 2460.0022
LYS 2470.0025
ASP 2480.0028
SER 2490.0027
VAL 2500.0025
MET 2510.0022
VAL 2520.0019
LEU 2530.0017
SER 2540.0015
ALA 2550.0014
THR 2560.0015
HIS 2570.0017
ARG 2580.0021
TYR 2590.0027
LYS 2600.0032
LYS 2610.0033
LYS 2620.0037
TYR 2630.0022
VAL 2640.0017
THR 2650.0015
THR 2660.0015
LEU 2670.0016
LEU 2680.0019
TYR 2690.0022
LYS 2700.0024
PRO 2710.0028
PRO 5280.0032
GLY 5290.0028
SER 5300.0024
HIS 5310.0024
THR 5320.0020
ILE 5330.0021
GLU 5340.0025
PHE 5350.0022
PHE 5360.0020
GLU 5370.0025
MET 5380.0026
CYS 5390.0022
ALA 5400.0023
ASN 5410.0027
LEU 5420.0025
ILE 5430.0022
LYS 5440.0025
ILE 5450.0026
LEU 5460.0023
ALA 5470.0020
GLN 5480.0022

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elNémo is maintained by Yves-Henri Sanejouand.
It was developed by Karsten Suhre.
Between 2003 and 2014, it was hosted by IGS (Marseille).
Between 2015 and 2025, it was hosted by US2B (Nantes).
Last modification: april 24th, 2026.