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***  Apo AMPK  ***

<R2> analysis for 260711175133601569

---  normal mode 71  ---

This page gives a visualization of the normalized mean square displacement <R2> of all C-alpha atoms in the protein that are associated to this mode (black bars). The three components of the corresponding eigenvector are shown on the left (colored bars). Here is the raw data for <R2> and for the eigenvector (shift-click on the links for download).

XYZresidue<R2><R2>max = 0.0713
ARG 100.0143
VAL 110.0126
LYS 120.0129
ILE 130.0120
GLY 140.0217
HIS 150.0176
TYR 160.0095
ILE 170.0099
LEU 180.0064
GLY 190.0190
ASP 200.0172
THR 210.0147
LEU 220.0118
GLY 230.0154
VAL 240.0249
GLY 250.0153
THR 260.0158
PHE 270.0148
GLY 280.0186
LYS 290.0155
VAL 300.0110
LYS 310.0072
VAL 320.0061
GLY 330.0063
LYS 340.0090
HIS 350.0090
GLU 360.0179
LEU 370.0234
THR 380.0096
GLY 390.0147
HIS 400.0129
LYS 410.0125
VAL 420.0101
ALA 430.0054
VAL 440.0040
LYS 450.0078
ILE 460.0089
LEU 470.0125
ASN 480.0098
ARG 490.0185
GLN 500.0094
LYS 510.0199
ILE 520.0188
ARG 530.0125
SER 540.0238
LEU 550.0356
ASP 560.0427
VAL 570.0197
VAL 580.0218
GLY 590.0218
LYS 600.0071
ILE 610.0150
ARG 620.0169
ARG 630.0105
GLU 640.0120
ILE 650.0124
GLN 660.0128
ASN 670.0106
LEU 680.0092
LYS 690.0095
LEU 700.0102
PHE 710.0075
ARG 720.0045
HIS 730.0082
PRO 740.0046
HIS 750.0047
ILE 760.0042
ILE 770.0044
LYS 780.0051
LEU 790.0065
TYR 800.0080
GLN 810.0110
VAL 820.0130
ILE 830.0163
SER 840.0232
THR 850.0434
PRO 860.0600
SER 870.0346
ASP 880.0106
ILE 890.0113
PHE 900.0065
MET 910.0087
VAL 920.0049
MET 930.0025
GLU 940.0065
TYR 950.0074
VAL 960.0096
SER 970.0224
GLY 980.0259
GLY 990.0247
GLU 1000.0149
LEU 1010.0114
PHE 1020.0086
ASP 1030.0115
TYR 1040.0135
ILE 1050.0077
CYS 1060.0107
LYS 1070.0200
ASN 1080.0255
GLY 1090.0187
ARG 1100.0145
LEU 1110.0170
ASP 1120.0155
GLU 1130.0147
LYS 1140.0168
GLU 1150.0118
SER 1160.0095
ARG 1170.0084
ARG 1180.0074
LEU 1190.0073
PHE 1200.0053
GLN 1210.0052
GLN 1220.0039
ILE 1230.0055
LEU 1240.0092
SER 1250.0102
GLY 1260.0107
VAL 1270.0108
ASP 1280.0141
TYR 1290.0115
CYS 1300.0111
HIS 1310.0160
ARG 1320.0166
HIS 1330.0118
MET 1340.0135
VAL 1350.0130
VAL 1360.0094
HIS 1370.0077
ARG 1380.0055
ASP 1390.0063
LEU 1400.0056
LYS 1410.0050
PRO 1420.0066
GLU 1430.0085
ASN 1440.0084
VAL 1450.0092
LEU 1460.0114
LEU 1470.0120
ASP 1480.0184
ALA 1490.0306
HIS 1500.0258
MET 1510.0117
ASN 1520.0096
ALA 1530.0045
LYS 1540.0034
ILE 1550.0054
ALA 1560.0071
ASP 1570.0050
PHE 1580.0069
GLY 1590.0069
LEU 1600.0044
SER 1610.0061
ASN 1620.0062
MET 1630.0115
MET 1640.0104
SER 1650.0093
ASP 1660.0059
GLY 1670.0051
GLU 1680.0056
PHE 1690.0076
LEU 1700.0069
ARG 1710.0044
SER 1730.0057
CYS 1740.0030
GLY 1750.0035
SER 1760.0094
PRO 1770.0119
ASN 1780.0125
TYR 1790.0052
ALA 1800.0048
ALA 1810.0062
PRO 1820.0096
GLU 1830.0072
VAL 1840.0062
ILE 1850.0149
SER 1860.0154
GLY 1870.0115
ARG 1880.0039
LEU 1890.0022
TYR 1900.0048
ALA 1910.0086
GLY 1920.0083
PRO 1930.0088
GLU 1940.0069
VAL 1950.0037
ASP 1960.0058
ILE 1970.0060
TRP 1980.0048
SER 1990.0030
SER 2000.0037
GLY 2010.0045
VAL 2020.0034
ILE 2030.0030
LEU 2040.0034
TYR 2050.0022
ALA 2060.0039
LEU 2070.0071
LEU 2080.0094
CYS 2090.0090
GLY 2100.0065
THR 2110.0062
LEU 2120.0104
PRO 2130.0093
PHE 2140.0118
ASP 2150.0281
ASP 2160.0400
ASP 2170.0713
HIS 2180.0261
VAL 2190.0280
PRO 2200.0460
THR 2210.0377
LEU 2220.0255
PHE 2230.0268
LYS 2240.0375
LYS 2250.0322
ILE 2260.0201
CYS 2270.0164
ASP 2280.0195
GLY 2290.0206
ILE 2300.0218
PHE 2310.0119
TYR 2320.0084
THR 2330.0111
PRO 2340.0258
GLN 2350.0378
TYR 2360.0297
LEU 2370.0220
ASN 2380.0220
PRO 2390.0154
SER 2400.0146
VAL 2410.0106
ILE 2420.0072
SER 2430.0061
LEU 2440.0052
LEU 2450.0010
LYS 2460.0036
HIS 2470.0043
MET 2480.0056
LEU 2490.0055
GLN 2500.0082
VAL 2510.0102
ASP 2520.0109
PRO 2530.0083
MET 2540.0099
LYS 2550.0108
ARG 2560.0083
ALA 2570.0029
THR 2580.0043
ILE 2590.0075
LYS 2600.0050
ASP 2610.0047
ILE 2620.0050
ARG 2630.0092
GLU 2640.0076
HIS 2650.0066
GLU 2660.0080
TRP 2670.0076
PHE 2680.0084
LYS 2690.0078
GLN 2700.0073
ASP 2710.0114
LEU 2720.0155
PRO 2730.0226
LYS 2740.0331
TYR 2750.0293
LEU 2760.0218
PHE 2770.0295
PRO 2780.0450
GLU 2790.0438
ASP 2800.0495
ALA 3210.0299
VAL 3220.0282
ALA 3230.0229
TYR 3240.0143
HIS 3250.0253
LEU 3260.0259
ILE 3270.0057
ILE 3280.0129
ASP 3290.0106
ASN 3300.0168
ARG 3310.0302
ARG 3320.0258
ILE 3330.0251
MET 3340.0286
ASN 3350.0333
GLU 3360.0208
ALA 3370.0080
LYS 3380.0165
ASP 3390.0228
PHE 3400.0219
TYR 3410.0231
LEU 3420.0037
ALA 3430.0051
THR 3440.0119
SER 3450.0086
PRO 3460.0053
PRO 3470.0057
ASP 3480.0097
SER 3490.0091
PHE 3500.0085
LEU 3510.0123
ASP 3520.0119
ASP 3530.0058
HIS 3540.0119
HIS 3550.0079
LEU 3560.0040
THR 3570.0171
ARG 3580.0404
PRO 3590.0134
HIS 3600.0091
PRO 3610.0146
GLU 3620.0178
ARG 3630.0165
VAL 3640.0181
PRO 3650.0156
PHE 3660.0116
LEU 3670.0201
VAL 3680.0316
ALA 3690.0349
GLU 3700.0227
THR 3710.0244
PRO 3720.0455
ARG 3730.0121
ALA 3740.0226
ALA 3940.0179
LYS 3950.0129
TRP 3960.0069
HIS 3970.0033
LEU 3980.0014
GLY 3990.0017
ILE 4000.0009
ARG 4010.0005
SER 4020.0005
GLN 4030.0015
SER 4040.0017
ARG 4050.0019
PRO 4060.0015
ASN 4070.0020
ASP 4080.0024
ILE 4090.0012
MET 4100.0011
ALA 4110.0011
GLU 4120.0008
VAL 4130.0005
CYS 4140.0009
ARG 4150.0013
ALA 4160.0010
ILE 4170.0012
LYS 4180.0021
GLN 4190.0024
LEU 4200.0023
ASP 4210.0021
TYR 4220.0013
GLU 4230.0008
TRP 4240.0007
LYS 4250.0007
VAL 4260.0014
VAL 4270.0018
ASN 4280.0025
PRO 4290.0031
TYR 4300.0012
TYR 4310.0007
LEU 4320.0006
ARG 4330.0005
VAL 4340.0005
ARG 4350.0010
ARG 4360.0019
LYS 4370.0013
ASN 4380.0025
PRO 4390.0072
VAL 4400.0079
THR 4410.0043
SER 4420.0031
THR 4430.0010
PHE 4440.0020
SER 4450.0031
LYS 4460.0022
MET 4470.0015
SER 4480.0011
LEU 4490.0008
GLN 4500.0008
LEU 4510.0013
TYR 4520.0011
GLN 4530.0009
VAL 4540.0012
ASP 4550.0012
SER 4560.0010
ARG 4570.0008
THR 4580.0008
TYR 4590.0008
LEU 4600.0006
LEU 4610.0007
ASP 4620.0009
PHE 4630.0008
ARG 4640.0014
SER 4650.0019
ILE 4660.0037
ASP 4670.0064
ASP 4680.0083
GLU 4690.0170
ILE 4700.0044
LYS 2030.0112
SER 2040.0057
PRO 2050.0021
PRO 2060.0012
ILE 2070.0006
LEU 2080.0019
PRO 2090.0045
PRO 2100.0058
HIS 2110.0068
LEU 2120.0048
LEU 2130.0055
GLN 2140.0063
VAL 2150.0067
ILE 2160.0062
LEU 2170.0072
ASN 2180.0099
LYS 2190.0077
ASP 2200.0071
THR 2210.0071
ASN 2220.0088
ILE 2230.0103
SER 2240.0065
CYS 2250.0073
ASP 2260.0093
PRO 2270.0067
ALA 2280.0073
LEU 2290.0066
LEU 2300.0040
PRO 2310.0046
GLU 2320.0054
PRO 2330.0063
ASN 2340.0064
HIS 2350.0046
VAL 2360.0063
MET 2370.0047
LEU 2380.0028
ASN 2390.0009
HIS 2400.0011
LEU 2410.0012
TYR 2420.0028
ALA 2430.0054
LEU 2440.0082
SER 2450.0217
ILE 2460.0123
LYS 2470.0206
ASP 2480.0149
SER 2490.0185
VAL 2500.0115
MET 2510.0030
VAL 2520.0029
LEU 2530.0043
SER 2540.0034
ALA 2550.0023
THR 2560.0027
HIS 2570.0029
ARG 2580.0054
TYR 2590.0121
LYS 2600.0141
LYS 2610.0157
LYS 2620.0130
TYR 2630.0073
VAL 2640.0084
THR 2650.0073
THR 2660.0047
LEU 2670.0045
LEU 2680.0041
TYR 2690.0026
LYS 2700.0035
PRO 2710.0053
PRO 5280.0062
GLY 5290.0020
SER 5300.0054
HIS 5310.0047
THR 5320.0034
ILE 5330.0043
GLU 5340.0031
PHE 5350.0019
PHE 5360.0022
GLU 5370.0011
MET 5380.0010
CYS 5390.0009
ALA 5400.0008
ASN 5410.0006
LEU 5420.0009
ILE 5430.0020
LYS 5440.0032
ILE 5450.0030
LEU 5460.0046
ALA 5470.0079
GLN 5480.0135

If you find results from this site helpful for your research, please cite one of our papers:

elNémo is maintained by Yves-Henri Sanejouand.
It was developed by Karsten Suhre.
Between 2003 and 2014, it was hosted by IGS (Marseille).
Between 2015 and 2025, it was hosted by US2B (Nantes).
Last modification: april 24th, 2026.