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***  Apo AMPK  ***

<R2> analysis for 260711175133601569

---  normal mode 72  ---

This page gives a visualization of the normalized mean square displacement <R2> of all C-alpha atoms in the protein that are associated to this mode (black bars). The three components of the corresponding eigenvector are shown on the left (colored bars). Here is the raw data for <R2> and for the eigenvector (shift-click on the links for download).

XYZresidue<R2><R2>max = 0.0889
ARG 100.0053
VAL 110.0052
LYS 120.0046
ILE 130.0049
GLY 140.0052
HIS 150.0035
TYR 160.0032
ILE 170.0029
LEU 180.0032
GLY 190.0089
ASP 200.0108
THR 210.0090
LEU 220.0067
GLY 230.0073
VAL 240.0143
GLY 250.0111
THR 260.0085
PHE 270.0078
GLY 280.0128
LYS 290.0109
VAL 300.0084
LYS 310.0040
VAL 320.0035
GLY 330.0035
LYS 340.0009
HIS 350.0032
GLU 360.0048
LEU 370.0110
THR 380.0084
GLY 390.0036
HIS 400.0024
LYS 410.0032
VAL 420.0031
ALA 430.0027
VAL 440.0034
LYS 450.0056
ILE 460.0096
LEU 470.0090
ASN 480.0091
ARG 490.0100
GLN 500.0105
LYS 510.0136
ILE 520.0143
ARG 530.0114
SER 540.0257
LEU 550.0200
ASP 560.0096
VAL 570.0128
VAL 580.0073
GLY 590.0087
LYS 600.0104
ILE 610.0093
ARG 620.0104
ARG 630.0070
GLU 640.0046
ILE 650.0055
GLN 660.0062
ASN 670.0024
LEU 680.0019
LYS 690.0030
LEU 700.0011
PHE 710.0023
ARG 720.0040
HIS 730.0036
PRO 740.0038
HIS 750.0040
ILE 760.0062
ILE 770.0057
LYS 780.0039
LEU 790.0031
TYR 800.0056
GLN 810.0077
VAL 820.0087
ILE 830.0096
SER 840.0103
THR 850.0157
PRO 860.0197
SER 870.0155
ASP 880.0090
ILE 890.0085
PHE 900.0091
MET 910.0062
VAL 920.0039
MET 930.0026
GLU 940.0046
TYR 950.0075
VAL 960.0136
SER 970.0230
GLY 980.0201
GLY 990.0166
GLU 1000.0118
LEU 1010.0045
PHE 1020.0129
ASP 1030.0154
TYR 1040.0140
ILE 1050.0251
CYS 1060.0667
LYS 1070.0678
ASN 1080.0619
GLY 1090.0208
ARG 1100.0134
LEU 1110.0069
ASP 1120.0139
GLU 1130.0118
LYS 1140.0107
GLU 1150.0127
SER 1160.0132
ARG 1170.0109
ARG 1180.0131
LEU 1190.0122
PHE 1200.0108
GLN 1210.0108
GLN 1220.0099
ILE 1230.0097
LEU 1240.0086
SER 1250.0063
GLY 1260.0061
VAL 1270.0070
ASP 1280.0070
TYR 1290.0061
CYS 1300.0064
HIS 1310.0058
ARG 1320.0063
HIS 1330.0056
MET 1340.0053
VAL 1350.0054
VAL 1360.0060
HIS 1370.0067
ARG 1380.0066
ASP 1390.0077
LEU 1400.0071
LYS 1410.0075
PRO 1420.0092
GLU 1430.0126
ASN 1440.0136
VAL 1450.0105
LEU 1460.0132
LEU 1470.0143
ASP 1480.0222
ALA 1490.0280
HIS 1500.0293
MET 1510.0169
ASN 1520.0166
ALA 1530.0104
LYS 1540.0090
ILE 1550.0085
ALA 1560.0095
ASP 1570.0073
PHE 1580.0044
GLY 1590.0045
LEU 1600.0059
SER 1610.0055
ASN 1620.0053
MET 1630.0055
MET 1640.0049
SER 1650.0049
ASP 1660.0037
GLY 1670.0036
GLU 1680.0038
PHE 1690.0042
LEU 1700.0051
ARG 1710.0058
SER 1730.0065
CYS 1740.0075
GLY 1750.0064
SER 1760.0059
PRO 1770.0066
ASN 1780.0063
TYR 1790.0056
ALA 1800.0045
ALA 1810.0032
PRO 1820.0057
GLU 1830.0045
VAL 1840.0050
ILE 1850.0051
SER 1860.0059
GLY 1870.0075
ARG 1880.0063
LEU 1890.0045
TYR 1900.0027
ALA 1910.0031
GLY 1920.0043
PRO 1930.0042
GLU 1940.0026
VAL 1950.0033
ASP 1960.0044
ILE 1970.0031
TRP 1980.0024
SER 1990.0044
SER 2000.0041
GLY 2010.0012
VAL 2020.0046
ILE 2030.0058
LEU 2040.0038
TYR 2050.0035
ALA 2060.0052
LEU 2070.0055
LEU 2080.0047
CYS 2090.0028
GLY 2100.0019
THR 2110.0026
LEU 2120.0147
PRO 2130.0138
PHE 2140.0120
ASP 2150.0142
ASP 2160.0048
ASP 2170.0157
HIS 2180.0251
VAL 2190.0225
PRO 2200.0247
THR 2210.0145
LEU 2220.0039
PHE 2230.0040
LYS 2240.0107
LYS 2250.0105
ILE 2260.0081
CYS 2270.0108
ASP 2280.0130
GLY 2290.0193
ILE 2300.0305
PHE 2310.0265
TYR 2320.0369
THR 2330.0165
PRO 2340.0200
GLN 2350.0182
TYR 2360.0102
LEU 2370.0063
ASN 2380.0066
PRO 2390.0063
SER 2400.0089
VAL 2410.0064
ILE 2420.0058
SER 2430.0091
LEU 2440.0067
LEU 2450.0069
LYS 2460.0111
HIS 2470.0107
MET 2480.0060
LEU 2490.0072
GLN 2500.0101
VAL 2510.0088
ASP 2520.0093
PRO 2530.0071
MET 2540.0085
LYS 2550.0119
ARG 2560.0092
ALA 2570.0076
THR 2580.0078
ILE 2590.0084
LYS 2600.0108
ASP 2610.0093
ILE 2620.0083
ARG 2630.0098
GLU 2640.0103
HIS 2650.0097
GLU 2660.0118
TRP 2670.0112
PHE 2680.0117
LYS 2690.0146
GLN 2700.0138
ASP 2710.0169
LEU 2720.0253
PRO 2730.0055
LYS 2740.0298
TYR 2750.0201
LEU 2760.0090
PHE 2770.0125
PRO 2780.0179
GLU 2790.0598
ASP 2800.0889
ALA 3210.0557
VAL 3220.0209
ALA 3230.0372
TYR 3240.0245
HIS 3250.0243
LEU 3260.0381
ILE 3270.0086
ILE 3280.0274
ASP 3290.0379
ASN 3300.0387
ARG 3310.0284
ARG 3320.0189
ILE 3330.0315
MET 3340.0180
ASN 3350.0300
GLU 3360.0383
ALA 3370.0349
LYS 3380.0339
ASP 3390.0207
PHE 3400.0054
TYR 3410.0143
LEU 3420.0194
ALA 3430.0105
THR 3440.0159
SER 3450.0244
PRO 3460.0305
PRO 3470.0425
ASP 3480.0278
SER 3490.0211
PHE 3500.0495
LEU 3510.0206
ASP 3520.0191
ASP 3530.0311
HIS 3540.0525
HIS 3550.0535
LEU 3560.0199
THR 3570.0181
ARG 3580.0160
PRO 3590.0158
HIS 3600.0148
PRO 3610.0169
GLU 3620.0133
ARG 3630.0087
VAL 3640.0082
PRO 3650.0048
PHE 3660.0062
LEU 3670.0066
VAL 3680.0025
ALA 3690.0122
GLU 3700.0172
THR 3710.0135
PRO 3720.0183
ARG 3730.0095
ALA 3740.0301
ALA 3940.0137
LYS 3950.0112
TRP 3960.0066
HIS 3970.0049
LEU 3980.0030
GLY 3990.0036
ILE 4000.0057
ARG 4010.0053
SER 4020.0059
GLN 4030.0101
SER 4040.0043
ARG 4050.0085
PRO 4060.0045
ASN 4070.0046
ASP 4080.0066
ILE 4090.0024
MET 4100.0018
ALA 4110.0033
GLU 4120.0029
VAL 4130.0027
CYS 4140.0014
ARG 4150.0034
ALA 4160.0041
ILE 4170.0028
LYS 4180.0029
GLN 4190.0043
LEU 4200.0041
ASP 4210.0032
TYR 4220.0032
GLU 4230.0026
TRP 4240.0018
LYS 4250.0025
VAL 4260.0029
VAL 4270.0037
ASN 4280.0050
PRO 4290.0059
TYR 4300.0011
TYR 4310.0019
LEU 4320.0021
ARG 4330.0037
VAL 4340.0038
ARG 4350.0044
ARG 4360.0077
LYS 4370.0056
ASN 4380.0048
PRO 4390.0118
VAL 4400.0125
THR 4410.0087
SER 4420.0049
THR 4430.0017
PHE 4440.0050
SER 4450.0059
LYS 4460.0047
MET 4470.0037
SER 4480.0030
LEU 4490.0026
GLN 4500.0019
LEU 4510.0012
TYR 4520.0021
GLN 4530.0033
VAL 4540.0081
ASP 4550.0126
SER 4560.0148
ARG 4570.0119
THR 4580.0089
TYR 4590.0043
LEU 4600.0033
LEU 4610.0029
ASP 4620.0026
PHE 4630.0020
ARG 4640.0019
SER 4650.0027
ILE 4660.0051
ASP 4670.0074
ASP 4680.0081
GLU 4690.0136
ILE 4700.0050
LYS 2030.0612
SER 2040.0312
PRO 2050.0100
PRO 2060.0033
ILE 2070.0044
LEU 2080.0042
PRO 2090.0032
PRO 2100.0030
HIS 2110.0033
LEU 2120.0039
LEU 2130.0044
GLN 2140.0048
VAL 2150.0083
ILE 2160.0079
LEU 2170.0082
ASN 2180.0090
LYS 2190.0122
ASP 2200.0183
THR 2210.0135
ASN 2220.0112
ILE 2230.0106
SER 2240.0089
CYS 2250.0061
ASP 2260.0062
PRO 2270.0090
ALA 2280.0107
LEU 2290.0071
LEU 2300.0076
PRO 2310.0066
GLU 2320.0077
PRO 2330.0058
ASN 2340.0046
HIS 2350.0044
VAL 2360.0036
MET 2370.0039
LEU 2380.0033
ASN 2390.0014
HIS 2400.0015
LEU 2410.0011
TYR 2420.0031
ALA 2430.0037
LEU 2440.0057
SER 2450.0133
ILE 2460.0090
LYS 2470.0159
ASP 2480.0054
SER 2490.0146
VAL 2500.0112
MET 2510.0037
VAL 2520.0029
LEU 2530.0027
SER 2540.0035
ALA 2550.0037
THR 2560.0042
HIS 2570.0038
ARG 2580.0035
TYR 2590.0049
LYS 2600.0054
LYS 2610.0098
LYS 2620.0113
TYR 2630.0051
VAL 2640.0057
THR 2650.0057
THR 2660.0040
LEU 2670.0031
LEU 2680.0021
TYR 2690.0056
LYS 2700.0062
PRO 2710.0076
PRO 5280.0059
GLY 5290.0035
SER 5300.0069
HIS 5310.0055
THR 5320.0039
ILE 5330.0041
GLU 5340.0037
PHE 5350.0023
PHE 5360.0018
GLU 5370.0034
MET 5380.0032
CYS 5390.0024
ALA 5400.0033
ASN 5410.0031
LEU 5420.0034
ILE 5430.0052
LYS 5440.0046
ILE 5450.0054
LEU 5460.0084
ALA 5470.0157
GLN 5480.0251

If you find results from this site helpful for your research, please cite one of our papers:

elNémo is maintained by Yves-Henri Sanejouand.
It was developed by Karsten Suhre.
Between 2003 and 2014, it was hosted by IGS (Marseille).
Between 2015 and 2025, it was hosted by US2B (Nantes).
Last modification: april 24th, 2026.