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***  Apo AMPK  ***

<R2> analysis for 260711175133601569

---  normal mode 76  ---

This page gives a visualization of the normalized mean square displacement <R2> of all C-alpha atoms in the protein that are associated to this mode (black bars). The three components of the corresponding eigenvector are shown on the left (colored bars). Here is the raw data for <R2> and for the eigenvector (shift-click on the links for download).

XYZresidue<R2><R2>max = 0.0656
ARG 100.0083
VAL 110.0090
LYS 120.0113
ILE 130.0101
GLY 140.0207
HIS 150.0191
TYR 160.0083
ILE 170.0064
LEU 180.0054
GLY 190.0167
ASP 200.0185
THR 210.0210
LEU 220.0244
GLY 230.0244
VAL 240.0320
GLY 250.0168
THR 260.0180
PHE 270.0114
GLY 280.0122
LYS 290.0135
VAL 300.0121
LYS 310.0091
VAL 320.0064
GLY 330.0062
LYS 340.0042
HIS 350.0069
GLU 360.0141
LEU 370.0236
THR 380.0051
GLY 390.0088
HIS 400.0145
LYS 410.0123
VAL 420.0099
ALA 430.0004
VAL 440.0020
LYS 450.0050
ILE 460.0042
LEU 470.0060
ASN 480.0045
ARG 490.0061
GLN 500.0046
LYS 510.0041
ILE 520.0050
ARG 530.0094
SER 540.0093
LEU 550.0033
ASP 560.0034
VAL 570.0051
VAL 580.0039
GLY 590.0051
LYS 600.0086
ILE 610.0067
ARG 620.0040
ARG 630.0070
GLU 640.0081
ILE 650.0091
GLN 660.0111
ASN 670.0139
LEU 680.0142
LYS 690.0155
LEU 700.0238
PHE 710.0196
ARG 720.0181
HIS 730.0154
PRO 740.0113
HIS 750.0089
ILE 760.0137
ILE 770.0139
LYS 780.0157
LEU 790.0147
TYR 800.0157
GLN 810.0153
VAL 820.0092
ILE 830.0082
SER 840.0061
THR 850.0079
PRO 860.0076
SER 870.0071
ASP 880.0065
ILE 890.0066
PHE 900.0057
MET 910.0076
VAL 920.0084
MET 930.0089
GLU 940.0102
TYR 950.0090
VAL 960.0134
SER 970.0222
GLY 980.0165
GLY 990.0180
GLU 1000.0143
LEU 1010.0111
PHE 1020.0166
ASP 1030.0221
TYR 1040.0183
ILE 1050.0215
CYS 1060.0307
LYS 1070.0350
ASN 1080.0341
GLY 1090.0299
ARG 1100.0216
LEU 1110.0182
ASP 1120.0123
GLU 1130.0122
LYS 1140.0142
GLU 1150.0118
SER 1160.0124
ARG 1170.0145
ARG 1180.0106
LEU 1190.0093
PHE 1200.0108
GLN 1210.0107
GLN 1220.0060
ILE 1230.0080
LEU 1240.0109
SER 1250.0084
GLY 1260.0111
VAL 1270.0123
ASP 1280.0141
TYR 1290.0154
CYS 1300.0146
HIS 1310.0148
ARG 1320.0185
HIS 1330.0163
MET 1340.0133
VAL 1350.0115
VAL 1360.0071
HIS 1370.0075
ARG 1380.0099
ASP 1390.0086
LEU 1400.0078
LYS 1410.0089
PRO 1420.0046
GLU 1430.0060
ASN 1440.0065
VAL 1450.0095
LEU 1460.0104
LEU 1470.0092
ASP 1480.0189
ALA 1490.0268
HIS 1500.0203
MET 1510.0064
ASN 1520.0048
ALA 1530.0052
LYS 1540.0096
ILE 1550.0107
ALA 1560.0120
ASP 1570.0058
PHE 1580.0063
GLY 1590.0040
LEU 1600.0097
SER 1610.0080
ASN 1620.0078
MET 1630.0074
MET 1640.0079
SER 1650.0076
ASP 1660.0052
GLY 1670.0053
GLU 1680.0068
PHE 1690.0093
LEU 1700.0122
ARG 1710.0150
SER 1730.0215
CYS 1740.0216
GLY 1750.0213
SER 1760.0298
PRO 1770.0272
ASN 1780.0259
TYR 1790.0167
ALA 1800.0177
ALA 1810.0177
PRO 1820.0171
GLU 1830.0156
VAL 1840.0172
ILE 1850.0187
SER 1860.0188
GLY 1870.0185
ARG 1880.0174
LEU 1890.0135
TYR 1900.0111
ALA 1910.0090
GLY 1920.0064
PRO 1930.0086
GLU 1940.0074
VAL 1950.0082
ASP 1960.0073
ILE 1970.0058
TRP 1980.0098
SER 1990.0127
SER 2000.0111
GLY 2010.0101
VAL 2020.0149
ILE 2030.0126
LEU 2040.0098
TYR 2050.0116
ALA 2060.0090
LEU 2070.0098
LEU 2080.0067
CYS 2090.0050
GLY 2100.0101
THR 2110.0108
LEU 2120.0279
PRO 2130.0274
PHE 2140.0292
ASP 2150.0419
ASP 2160.0259
ASP 2170.0317
HIS 2180.0365
VAL 2190.0511
PRO 2200.0656
THR 2210.0326
LEU 2220.0037
PHE 2230.0082
LYS 2240.0179
LYS 2250.0239
ILE 2260.0200
CYS 2270.0159
ASP 2280.0171
GLY 2290.0230
ILE 2300.0276
PHE 2310.0335
TYR 2320.0430
THR 2330.0186
PRO 2340.0211
GLN 2350.0452
TYR 2360.0267
LEU 2370.0117
ASN 2380.0060
PRO 2390.0042
SER 2400.0077
VAL 2410.0095
ILE 2420.0051
SER 2430.0067
LEU 2440.0106
LEU 2450.0116
LYS 2460.0132
HIS 2470.0079
MET 2480.0095
LEU 2490.0135
GLN 2500.0129
VAL 2510.0156
ASP 2520.0124
PRO 2530.0104
MET 2540.0068
LYS 2550.0079
ARG 2560.0083
ALA 2570.0077
THR 2580.0146
ILE 2590.0162
LYS 2600.0293
ASP 2610.0254
ILE 2620.0190
ARG 2630.0186
GLU 2640.0269
HIS 2650.0262
GLU 2660.0328
TRP 2670.0247
PHE 2680.0208
LYS 2690.0240
GLN 2700.0276
ASP 2710.0250
LEU 2720.0201
PRO 2730.0193
LYS 2740.0140
TYR 2750.0210
LEU 2760.0132
PHE 2770.0140
PRO 2780.0291
GLU 2790.0207
ASP 2800.0223
ALA 3210.0183
VAL 3220.0118
ALA 3230.0120
TYR 3240.0104
HIS 3250.0138
LEU 3260.0130
ILE 3270.0012
ILE 3280.0089
ASP 3290.0079
ASN 3300.0102
ARG 3310.0140
ARG 3320.0116
ILE 3330.0179
MET 3340.0054
ASN 3350.0108
GLU 3360.0183
ALA 3370.0137
LYS 3380.0135
ASP 3390.0088
PHE 3400.0044
TYR 3410.0106
LEU 3420.0134
ALA 3430.0117
THR 3440.0126
SER 3450.0085
PRO 3460.0073
PRO 3470.0068
ASP 3480.0121
SER 3490.0099
PHE 3500.0036
LEU 3510.0164
ASP 3520.0092
ASP 3530.0140
HIS 3540.0046
HIS 3550.0080
LEU 3560.0074
THR 3570.0166
ARG 3580.0150
PRO 3590.0125
HIS 3600.0037
PRO 3610.0060
GLU 3620.0075
ARG 3630.0040
VAL 3640.0042
PRO 3650.0065
PHE 3660.0102
LEU 3670.0122
VAL 3680.0182
ALA 3690.0139
GLU 3700.0025
THR 3710.0144
PRO 3720.0188
ARG 3730.0064
ALA 3740.0082
ALA 3940.0215
LYS 3950.0150
TRP 3960.0071
HIS 3970.0027
LEU 3980.0032
GLY 3990.0047
ILE 4000.0110
ARG 4010.0121
SER 4020.0148
GLN 4030.0171
SER 4040.0073
ARG 4050.0177
PRO 4060.0088
ASN 4070.0089
ASP 4080.0138
ILE 4090.0089
MET 4100.0066
ALA 4110.0088
GLU 4120.0160
VAL 4130.0121
CYS 4140.0121
ARG 4150.0161
ALA 4160.0127
ILE 4170.0103
LYS 4180.0150
GLN 4190.0118
LEU 4200.0089
ASP 4210.0116
TYR 4220.0082
GLU 4230.0071
TRP 4240.0046
LYS 4250.0043
VAL 4260.0059
VAL 4270.0054
ASN 4280.0062
PRO 4290.0057
TYR 4300.0052
TYR 4310.0051
LEU 4320.0041
ARG 4330.0062
VAL 4340.0058
ARG 4350.0053
ARG 4360.0082
LYS 4370.0072
ASN 4380.0076
PRO 4390.0110
VAL 4400.0107
THR 4410.0057
SER 4420.0046
THR 4430.0047
PHE 4440.0063
SER 4450.0068
LYS 4460.0065
MET 4470.0059
SER 4480.0053
LEU 4490.0053
GLN 4500.0051
LEU 4510.0057
TYR 4520.0048
GLN 4530.0056
VAL 4540.0111
ASP 4550.0196
SER 4560.0230
ARG 4570.0185
THR 4580.0157
TYR 4590.0084
LEU 4600.0071
LEU 4610.0071
ASP 4620.0063
PHE 4630.0041
ARG 4640.0035
SER 4650.0035
ILE 4660.0071
ASP 4670.0070
ASP 4680.0084
GLU 4690.0246
ILE 4700.0046
LYS 2030.0388
SER 2040.0221
PRO 2050.0042
PRO 2060.0064
ILE 2070.0067
LEU 2080.0056
PRO 2090.0077
PRO 2100.0080
HIS 2110.0067
LEU 2120.0055
LEU 2130.0066
GLN 2140.0068
VAL 2150.0059
ILE 2160.0052
LEU 2170.0065
ASN 2180.0102
LYS 2190.0064
ASP 2200.0061
THR 2210.0132
ASN 2220.0123
ILE 2230.0088
SER 2240.0081
CYS 2250.0078
ASP 2260.0073
PRO 2270.0117
ALA 2280.0133
LEU 2290.0131
LEU 2300.0086
PRO 2310.0073
GLU 2320.0054
PRO 2330.0054
ASN 2340.0059
HIS 2350.0060
VAL 2360.0048
MET 2370.0042
LEU 2380.0034
ASN 2390.0021
HIS 2400.0017
LEU 2410.0013
TYR 2420.0029
ALA 2430.0052
LEU 2440.0076
SER 2450.0252
ILE 2460.0181
LYS 2470.0177
ASP 2480.0121
SER 2490.0229
VAL 2500.0127
MET 2510.0062
VAL 2520.0051
LEU 2530.0042
SER 2540.0042
ALA 2550.0035
THR 2560.0034
HIS 2570.0043
ARG 2580.0051
TYR 2590.0079
LYS 2600.0064
LYS 2610.0087
LYS 2620.0098
TYR 2630.0044
VAL 2640.0039
THR 2650.0033
THR 2660.0065
LEU 2670.0060
LEU 2680.0053
TYR 2690.0070
LYS 2700.0061
PRO 2710.0118
PRO 5280.0024
GLY 5290.0026
SER 5300.0043
HIS 5310.0056
THR 5320.0043
ILE 5330.0034
GLU 5340.0046
PHE 5350.0039
PHE 5360.0023
GLU 5370.0049
MET 5380.0053
CYS 5390.0043
ALA 5400.0066
ASN 5410.0060
LEU 5420.0045
ILE 5430.0088
LYS 5440.0122
ILE 5450.0097
LEU 5460.0152
ALA 5470.0238
GLN 5480.0328

If you find results from this site helpful for your research, please cite one of our papers:

elNémo is maintained by Yves-Henri Sanejouand.
It was developed by Karsten Suhre.
Between 2003 and 2014, it was hosted by IGS (Marseille).
Between 2015 and 2025, it was hosted by US2B (Nantes).
Last modification: april 24th, 2026.