CNRS Nantes University US2B US2B
home |  start a new run |  job status |  references&downloads |  examples |  help  

Should you encounter any unexpected behaviour,
please let us know.
 elNémo has been relocated.
**Some cleaning from time to time**
Sorry for the inconvenience.


***  Apo AMPK  ***

<R2> analysis for 260711175133601569

---  normal mode 77  ---

This page gives a visualization of the normalized mean square displacement <R2> of all C-alpha atoms in the protein that are associated to this mode (black bars). The three components of the corresponding eigenvector are shown on the left (colored bars). Here is the raw data for <R2> and for the eigenvector (shift-click on the links for download).

XYZresidue<R2><R2>max = 0.0570
ARG 100.0141
VAL 110.0132
LYS 120.0119
ILE 130.0093
GLY 140.0160
HIS 150.0114
TYR 160.0040
ILE 170.0048
LEU 180.0018
GLY 190.0025
ASP 200.0091
THR 210.0154
LEU 220.0165
GLY 230.0187
VAL 240.0260
GLY 250.0087
THR 260.0051
PHE 270.0039
GLY 280.0090
LYS 290.0119
VAL 300.0089
LYS 310.0083
VAL 320.0065
GLY 330.0046
LYS 340.0052
HIS 350.0021
GLU 360.0102
LEU 370.0094
THR 380.0115
GLY 390.0142
HIS 400.0107
LYS 410.0094
VAL 420.0095
ALA 430.0046
VAL 440.0048
LYS 450.0042
ILE 460.0052
LEU 470.0050
ASN 480.0053
ARG 490.0072
GLN 500.0093
LYS 510.0097
ILE 520.0059
ARG 530.0143
SER 540.0172
LEU 550.0081
ASP 560.0212
VAL 570.0154
VAL 580.0220
GLY 590.0174
LYS 600.0069
ILE 610.0104
ARG 620.0155
ARG 630.0141
GLU 640.0133
ILE 650.0150
GLN 660.0189
ASN 670.0168
LEU 680.0139
LYS 690.0162
LEU 700.0167
PHE 710.0119
ARG 720.0092
HIS 730.0088
PRO 740.0130
HIS 750.0150
ILE 760.0100
ILE 770.0073
LYS 780.0053
LEU 790.0063
TYR 800.0079
GLN 810.0107
VAL 820.0075
ILE 830.0073
SER 840.0069
THR 850.0098
PRO 860.0090
SER 870.0054
ASP 880.0046
ILE 890.0036
PHE 900.0038
MET 910.0049
VAL 920.0054
MET 930.0044
GLU 940.0038
TYR 950.0061
VAL 960.0044
SER 970.0126
GLY 980.0120
GLY 990.0060
GLU 1000.0041
LEU 1010.0052
PHE 1020.0050
ASP 1030.0058
TYR 1040.0052
ILE 1050.0036
CYS 1060.0039
LYS 1070.0095
ASN 1080.0121
GLY 1090.0116
ARG 1100.0090
LEU 1110.0066
ASP 1120.0048
GLU 1130.0040
LYS 1140.0029
GLU 1150.0045
SER 1160.0078
ARG 1170.0107
ARG 1180.0113
LEU 1190.0124
PHE 1200.0126
GLN 1210.0172
GLN 1220.0162
ILE 1230.0156
LEU 1240.0131
SER 1250.0118
GLY 1260.0119
VAL 1270.0090
ASP 1280.0080
TYR 1290.0085
CYS 1300.0105
HIS 1310.0107
ARG 1320.0105
HIS 1330.0125
MET 1340.0132
VAL 1350.0140
VAL 1360.0121
HIS 1370.0095
ARG 1380.0090
ASP 1390.0039
LEU 1400.0032
LYS 1410.0032
PRO 1420.0031
GLU 1430.0044
ASN 1440.0044
VAL 1450.0068
LEU 1460.0042
LEU 1470.0050
ASP 1480.0121
ALA 1490.0346
HIS 1500.0348
MET 1510.0092
ASN 1520.0139
ALA 1530.0135
LYS 1540.0096
ILE 1550.0102
ALA 1560.0088
ASP 1570.0070
PHE 1580.0093
GLY 1590.0082
LEU 1600.0087
SER 1610.0114
ASN 1620.0130
MET 1630.0153
MET 1640.0141
SER 1650.0135
ASP 1660.0084
GLY 1670.0074
GLU 1680.0105
PHE 1690.0122
LEU 1700.0140
ARG 1710.0150
SER 1730.0104
CYS 1740.0073
GLY 1750.0059
SER 1760.0110
PRO 1770.0129
ASN 1780.0128
TYR 1790.0066
ALA 1800.0079
ALA 1810.0091
PRO 1820.0113
GLU 1830.0124
VAL 1840.0126
ILE 1850.0137
SER 1860.0141
GLY 1870.0149
ARG 1880.0142
LEU 1890.0137
TYR 1900.0133
ALA 1910.0122
GLY 1920.0111
PRO 1930.0094
GLU 1940.0083
VAL 1950.0072
ASP 1960.0063
ILE 1970.0031
TRP 1980.0029
SER 1990.0041
SER 2000.0055
GLY 2010.0053
VAL 2020.0075
ILE 2030.0128
LEU 2040.0098
TYR 2050.0122
ALA 2060.0126
LEU 2070.0086
LEU 2080.0099
CYS 2090.0149
GLY 2100.0134
THR 2110.0173
LEU 2120.0145
PRO 2130.0133
PHE 2140.0120
ASP 2150.0170
ASP 2160.0161
ASP 2170.0191
HIS 2180.0194
VAL 2190.0290
PRO 2200.0338
THR 2210.0178
LEU 2220.0156
PHE 2230.0199
LYS 2240.0167
LYS 2250.0115
ILE 2260.0140
CYS 2270.0161
ASP 2280.0114
GLY 2290.0121
ILE 2300.0156
PHE 2310.0192
TYR 2320.0220
THR 2330.0283
PRO 2340.0306
GLN 2350.0340
TYR 2360.0278
LEU 2370.0200
ASN 2380.0136
PRO 2390.0131
SER 2400.0107
VAL 2410.0125
ILE 2420.0125
SER 2430.0141
LEU 2440.0137
LEU 2450.0093
LYS 2460.0090
HIS 2470.0083
MET 2480.0042
LEU 2490.0035
GLN 2500.0024
VAL 2510.0052
ASP 2520.0082
PRO 2530.0074
MET 2540.0069
LYS 2550.0059
ARG 2560.0022
ALA 2570.0056
THR 2580.0058
ILE 2590.0062
LYS 2600.0086
ASP 2610.0093
ILE 2620.0096
ARG 2630.0103
GLU 2640.0124
HIS 2650.0130
GLU 2660.0171
TRP 2670.0136
PHE 2680.0139
LYS 2690.0159
GLN 2700.0163
ASP 2710.0164
LEU 2720.0201
PRO 2730.0268
LYS 2740.0244
TYR 2750.0272
LEU 2760.0205
PHE 2770.0140
PRO 2780.0174
GLU 2790.0281
ASP 2800.0396
ALA 3210.0035
VAL 3220.0050
ALA 3230.0075
TYR 3240.0040
HIS 3250.0060
LEU 3260.0058
ILE 3270.0026
ILE 3280.0032
ASP 3290.0040
ASN 3300.0075
ARG 3310.0075
ARG 3320.0030
ILE 3330.0041
MET 3340.0029
ASN 3350.0093
GLU 3360.0155
ALA 3370.0218
LYS 3380.0220
ASP 3390.0275
PHE 3400.0236
TYR 3410.0182
LEU 3420.0208
ALA 3430.0165
THR 3440.0179
SER 3450.0128
PRO 3460.0121
PRO 3470.0149
ASP 3480.0265
SER 3490.0196
PHE 3500.0106
LEU 3510.0307
ASP 3520.0178
ASP 3530.0331
HIS 3540.0039
HIS 3550.0101
LEU 3560.0149
THR 3570.0312
ARG 3580.0259
PRO 3590.0240
HIS 3600.0101
PRO 3610.0117
GLU 3620.0098
ARG 3630.0059
VAL 3640.0093
PRO 3650.0099
PHE 3660.0164
LEU 3670.0230
VAL 3680.0328
ALA 3690.0249
GLU 3700.0044
THR 3710.0247
PRO 3720.0307
ARG 3730.0121
ALA 3740.0203
ALA 3940.0111
LYS 3950.0075
TRP 3960.0090
HIS 3970.0070
LEU 3980.0059
GLY 3990.0062
ILE 4000.0106
ARG 4010.0113
SER 4020.0137
GLN 4030.0168
SER 4040.0101
ARG 4050.0089
PRO 4060.0080
ASN 4070.0075
ASP 4080.0064
ILE 4090.0059
MET 4100.0041
ALA 4110.0057
GLU 4120.0161
VAL 4130.0118
CYS 4140.0117
ARG 4150.0171
ALA 4160.0149
ILE 4170.0100
LYS 4180.0134
GLN 4190.0135
LEU 4200.0087
ASP 4210.0081
TYR 4220.0070
GLU 4230.0068
TRP 4240.0062
LYS 4250.0075
VAL 4260.0066
VAL 4270.0075
ASN 4280.0068
PRO 4290.0072
TYR 4300.0064
TYR 4310.0061
LEU 4320.0044
ARG 4330.0070
VAL 4340.0065
ARG 4350.0070
ARG 4360.0146
LYS 4370.0122
ASN 4380.0130
PRO 4390.0236
VAL 4400.0242
THR 4410.0131
SER 4420.0101
THR 4430.0079
PHE 4440.0115
SER 4450.0121
LYS 4460.0093
MET 4470.0070
SER 4480.0057
LEU 4490.0056
GLN 4500.0059
LEU 4510.0077
TYR 4520.0070
GLN 4530.0074
VAL 4540.0104
ASP 4550.0159
SER 4560.0171
ARG 4570.0154
THR 4580.0147
TYR 4590.0108
LEU 4600.0072
LEU 4610.0075
ASP 4620.0069
PHE 4630.0035
ARG 4640.0030
SER 4650.0043
ILE 4660.0084
ASP 4670.0145
ASP 4680.0184
GLU 4690.0570
ILE 4700.0106
LYS 2030.0115
SER 2040.0084
PRO 2050.0056
PRO 2060.0077
ILE 2070.0080
LEU 2080.0086
PRO 2090.0109
PRO 2100.0097
HIS 2110.0080
LEU 2120.0066
LEU 2130.0069
GLN 2140.0061
VAL 2150.0086
ILE 2160.0089
LEU 2170.0093
ASN 2180.0083
LYS 2190.0084
ASP 2200.0078
THR 2210.0194
ASN 2220.0192
ILE 2230.0155
SER 2240.0141
CYS 2250.0133
ASP 2260.0112
PRO 2270.0150
ALA 2280.0176
LEU 2290.0198
LEU 2300.0117
PRO 2310.0098
GLU 2320.0087
PRO 2330.0124
ASN 2340.0065
HIS 2350.0046
VAL 2360.0066
MET 2370.0050
LEU 2380.0053
ASN 2390.0066
HIS 2400.0046
LEU 2410.0040
TYR 2420.0093
ALA 2430.0093
LEU 2440.0090
SER 2450.0267
ILE 2460.0268
LYS 2470.0252
ASP 2480.0189
SER 2490.0349
VAL 2500.0317
MET 2510.0178
VAL 2520.0154
LEU 2530.0120
SER 2540.0103
ALA 2550.0101
THR 2560.0107
HIS 2570.0101
ARG 2580.0172
TYR 2590.0346
LYS 2600.0203
LYS 2610.0453
LYS 2620.0526
TYR 2630.0153
VAL 2640.0109
THR 2650.0085
THR 2660.0174
LEU 2670.0172
LEU 2680.0155
TYR 2690.0283
LYS 2700.0281
PRO 2710.0415
PRO 5280.0056
GLY 5290.0049
SER 5300.0066
HIS 5310.0071
THR 5320.0042
ILE 5330.0027
GLU 5340.0055
PHE 5350.0044
PHE 5360.0014
GLU 5370.0039
MET 5380.0054
CYS 5390.0032
ALA 5400.0062
ASN 5410.0047
LEU 5420.0054
ILE 5430.0104
LYS 5440.0131
ILE 5450.0142
LEU 5460.0191
ALA 5470.0252
GLN 5480.0332

If you find results from this site helpful for your research, please cite one of our papers:

elNémo is maintained by Yves-Henri Sanejouand.
It was developed by Karsten Suhre.
Between 2003 and 2014, it was hosted by IGS (Marseille).
Between 2015 and 2025, it was hosted by US2B (Nantes).
Last modification: april 24th, 2026.