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***  Apo AMPK  ***

<R2> analysis for 260711175133601569

---  normal mode 78  ---

This page gives a visualization of the normalized mean square displacement <R2> of all C-alpha atoms in the protein that are associated to this mode (black bars). The three components of the corresponding eigenvector are shown on the left (colored bars). Here is the raw data for <R2> and for the eigenvector (shift-click on the links for download).

XYZresidue<R2><R2>max = 0.1186
ARG 100.0047
VAL 110.0041
LYS 120.0032
ILE 130.0024
GLY 140.0029
HIS 150.0017
TYR 160.0010
ILE 170.0016
LEU 180.0011
GLY 190.0019
ASP 200.0044
THR 210.0057
LEU 220.0054
GLY 230.0070
VAL 240.0095
GLY 250.0038
THR 260.0033
PHE 270.0037
GLY 280.0055
LYS 290.0056
VAL 300.0045
LYS 310.0036
VAL 320.0031
GLY 330.0019
LYS 340.0023
HIS 350.0024
GLU 360.0034
LEU 370.0048
THR 380.0058
GLY 390.0046
HIS 400.0029
LYS 410.0027
VAL 420.0029
ALA 430.0026
VAL 440.0026
LYS 450.0028
ILE 460.0038
LEU 470.0043
ASN 480.0043
ARG 490.0052
GLN 500.0053
LYS 510.0053
ILE 520.0032
ARG 530.0079
SER 540.0091
LEU 550.0035
ASP 560.0091
VAL 570.0076
VAL 580.0106
GLY 590.0084
LYS 600.0050
ILE 610.0052
ARG 620.0076
ARG 630.0074
GLU 640.0066
ILE 650.0067
GLN 660.0089
ASN 670.0077
LEU 680.0061
LYS 690.0064
LEU 700.0057
PHE 710.0049
ARG 720.0041
HIS 730.0057
PRO 740.0072
HIS 750.0083
ILE 760.0066
ILE 770.0053
LYS 780.0034
LEU 790.0006
TYR 800.0023
GLN 810.0035
VAL 820.0037
ILE 830.0042
SER 840.0044
THR 850.0060
PRO 860.0054
SER 870.0048
ASP 880.0042
ILE 890.0038
PHE 900.0037
MET 910.0017
VAL 920.0021
MET 930.0018
GLU 940.0006
TYR 950.0005
VAL 960.0048
SER 970.0065
GLY 980.0066
GLY 990.0066
GLU 1000.0066
LEU 1010.0050
PHE 1020.0056
ASP 1030.0048
TYR 1040.0029
ILE 1050.0052
CYS 1060.0113
LYS 1070.0107
ASN 1080.0110
GLY 1090.0084
ARG 1100.0070
LEU 1110.0034
ASP 1120.0032
GLU 1130.0022
LYS 1140.0011
GLU 1150.0014
SER 1160.0026
ARG 1170.0037
ARG 1180.0042
LEU 1190.0051
PHE 1200.0049
GLN 1210.0059
GLN 1220.0066
ILE 1230.0071
LEU 1240.0047
SER 1250.0044
GLY 1260.0053
VAL 1270.0051
ASP 1280.0039
TYR 1290.0035
CYS 1300.0049
HIS 1310.0055
ARG 1320.0046
HIS 1330.0061
MET 1340.0074
VAL 1350.0065
VAL 1360.0059
HIS 1370.0049
ARG 1380.0054
ASP 1390.0035
LEU 1400.0031
LYS 1410.0038
PRO 1420.0041
GLU 1430.0049
ASN 1440.0053
VAL 1450.0068
LEU 1460.0069
LEU 1470.0067
ASP 1480.0094
ALA 1490.0093
HIS 1500.0115
MET 1510.0071
ASN 1520.0085
ALA 1530.0085
LYS 1540.0072
ILE 1550.0071
ALA 1560.0068
ASP 1570.0046
PHE 1580.0051
GLY 1590.0047
LEU 1600.0054
SER 1610.0059
ASN 1620.0066
MET 1630.0082
MET 1640.0090
SER 1650.0100
ASP 1660.0106
GLY 1670.0103
GLU 1680.0085
PHE 1690.0060
LEU 1700.0055
ARG 1710.0042
SER 1730.0050
CYS 1740.0043
GLY 1750.0039
SER 1760.0024
PRO 1770.0020
ASN 1780.0033
TYR 1790.0022
ALA 1800.0038
ALA 1810.0051
PRO 1820.0063
GLU 1830.0059
VAL 1840.0061
ILE 1850.0058
SER 1860.0055
GLY 1870.0050
ARG 1880.0042
LEU 1890.0026
TYR 1900.0048
ALA 1910.0073
GLY 1920.0062
PRO 1930.0056
GLU 1940.0051
VAL 1950.0047
ASP 1960.0044
ILE 1970.0026
TRP 1980.0029
SER 1990.0032
SER 2000.0021
GLY 2010.0024
VAL 2020.0026
ILE 2030.0051
LEU 2040.0043
TYR 2050.0052
ALA 2060.0071
LEU 2070.0055
LEU 2080.0056
CYS 2090.0086
GLY 2100.0101
THR 2110.0095
LEU 2120.0058
PRO 2130.0050
PHE 2140.0047
ASP 2150.0053
ASP 2160.0018
ASP 2170.0027
HIS 2180.0051
VAL 2190.0031
PRO 2200.0046
THR 2210.0046
LEU 2220.0029
PHE 2230.0040
LYS 2240.0049
LYS 2250.0056
ILE 2260.0060
CYS 2270.0072
ASP 2280.0064
GLY 2290.0073
ILE 2300.0078
PHE 2310.0069
TYR 2320.0060
THR 2330.0073
PRO 2340.0151
GLN 2350.0199
TYR 2360.0095
LEU 2370.0074
ASN 2380.0050
PRO 2390.0041
SER 2400.0031
VAL 2410.0047
ILE 2420.0042
SER 2430.0041
LEU 2440.0042
LEU 2450.0036
LYS 2460.0038
HIS 2470.0037
MET 2480.0023
LEU 2490.0024
GLN 2500.0031
VAL 2510.0057
ASP 2520.0067
PRO 2530.0067
MET 2540.0082
LYS 2550.0048
ARG 2560.0032
ALA 2570.0032
THR 2580.0027
ILE 2590.0025
LYS 2600.0072
ASP 2610.0059
ILE 2620.0042
ARG 2630.0052
GLU 2640.0066
HIS 2650.0058
GLU 2660.0060
TRP 2670.0051
PHE 2680.0046
LYS 2690.0056
GLN 2700.0053
ASP 2710.0054
LEU 2720.0064
PRO 2730.0087
LYS 2740.0077
TYR 2750.0061
LEU 2760.0041
PHE 2770.0047
PRO 2780.0145
GLU 2790.0129
ASP 2800.0134
ALA 3210.0334
VAL 3220.0229
ALA 3230.0157
TYR 3240.0117
HIS 3250.0222
LEU 3260.0308
ILE 3270.0120
ILE 3280.0122
ASP 3290.0139
ASN 3300.0266
ARG 3310.0147
ARG 3320.0201
ILE 3330.0434
MET 3340.0147
ASN 3350.0258
GLU 3360.0398
ALA 3370.0153
LYS 3380.0220
ASP 3390.0332
PHE 3400.0340
TYR 3410.0324
LEU 3420.0268
ALA 3430.0190
THR 3440.0211
SER 3450.0145
PRO 3460.0076
PRO 3470.0221
ASP 3480.0269
SER 3490.0263
PHE 3500.0388
LEU 3510.0437
ASP 3520.0263
ASP 3530.0159
HIS 3540.0237
HIS 3550.0320
LEU 3560.0117
THR 3570.0195
ARG 3580.0136
PRO 3590.0113
HIS 3600.0080
PRO 3610.0034
GLU 3620.0079
ARG 3630.0082
VAL 3640.0051
PRO 3650.0007
PHE 3660.0083
LEU 3670.0146
VAL 3680.0189
ALA 3690.0159
GLU 3700.0047
THR 3710.0146
PRO 3720.0217
ARG 3730.0078
ALA 3740.0102
ALA 3940.0280
LYS 3950.0216
TRP 3960.0166
HIS 3970.0078
LEU 3980.0071
GLY 3990.0088
ILE 4000.0136
ARG 4010.0116
SER 4020.0105
GLN 4030.0092
SER 4040.0241
ARG 4050.0404
PRO 4060.0193
ASN 4070.0099
ASP 4080.0099
ILE 4090.0133
MET 4100.0124
ALA 4110.0141
GLU 4120.0310
VAL 4130.0260
CYS 4140.0255
ARG 4150.0296
ALA 4160.0221
ILE 4170.0192
LYS 4180.0299
GLN 4190.0227
LEU 4200.0164
ASP 4210.0237
TYR 4220.0153
GLU 4230.0153
TRP 4240.0178
LYS 4250.0157
VAL 4260.0179
VAL 4270.0175
ASN 4280.0144
PRO 4290.0099
TYR 4300.0091
TYR 4310.0111
LEU 4320.0119
ARG 4330.0088
VAL 4340.0085
ARG 4350.0063
ARG 4360.0077
LYS 4370.0084
ASN 4380.0125
PRO 4390.0492
VAL 4400.0515
THR 4410.0304
SER 4420.0152
THR 4430.0066
PHE 4440.0029
SER 4450.0042
LYS 4460.0067
MET 4470.0088
SER 4480.0090
LEU 4490.0082
GLN 4500.0082
LEU 4510.0073
TYR 4520.0109
GLN 4530.0151
VAL 4540.0319
ASP 4550.0398
SER 4560.0469
ARG 4570.0307
THR 4580.0204
TYR 4590.0145
LEU 4600.0103
LEU 4610.0086
ASP 4620.0081
PHE 4630.0055
ARG 4640.0059
SER 4650.0063
ILE 4660.0164
ASP 4670.0198
ASP 4680.0255
GLU 4690.1186
ILE 4700.0145
LYS 2030.0369
SER 2040.0195
PRO 2050.0062
PRO 2060.0078
ILE 2070.0090
LEU 2080.0095
PRO 2090.0018
PRO 2100.0057
HIS 2110.0079
LEU 2120.0073
LEU 2130.0080
GLN 2140.0119
VAL 2150.0154
ILE 2160.0160
LEU 2170.0175
ASN 2180.0188
LYS 2190.0138
ASP 2200.0088
THR 2210.0126
ASN 2220.0106
ILE 2230.0083
SER 2240.0128
CYS 2250.0152
ASP 2260.0153
PRO 2270.0147
ALA 2280.0164
LEU 2290.0208
LEU 2300.0070
PRO 2310.0135
GLU 2320.0126
PRO 2330.0118
ASN 2340.0110
HIS 2350.0106
VAL 2360.0104
MET 2370.0118
LEU 2380.0117
ASN 2390.0095
HIS 2400.0087
LEU 2410.0083
TYR 2420.0128
ALA 2430.0152
LEU 2440.0173
SER 2450.0265
ILE 2460.0118
LYS 2470.0168
ASP 2480.0269
SER 2490.0254
VAL 2500.0192
MET 2510.0154
VAL 2520.0152
LEU 2530.0147
SER 2540.0145
ALA 2550.0134
THR 2560.0136
HIS 2570.0118
ARG 2580.0095
TYR 2590.0120
LYS 2600.0112
LYS 2610.0096
LYS 2620.0086
TYR 2630.0089
VAL 2640.0128
THR 2650.0158
THR 2660.0189
LEU 2670.0191
LEU 2680.0190
TYR 2690.0290
LYS 2700.0298
PRO 2710.0402
PRO 5280.0422
GLY 5290.0175
SER 5300.0156
HIS 5310.0096
THR 5320.0088
ILE 5330.0084
GLU 5340.0092
PHE 5350.0088
PHE 5360.0093
GLU 5370.0092
MET 5380.0082
CYS 5390.0076
ALA 5400.0104
ASN 5410.0082
LEU 5420.0084
ILE 5430.0096
LYS 5440.0154
ILE 5450.0132
LEU 5460.0264
ALA 5470.0362
GLN 5480.0501

If you find results from this site helpful for your research, please cite one of our papers:

elNémo is maintained by Yves-Henri Sanejouand.
It was developed by Karsten Suhre.
Between 2003 and 2014, it was hosted by IGS (Marseille).
Between 2015 and 2025, it was hosted by US2B (Nantes).
Last modification: april 24th, 2026.