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***  Apo AMPK  ***

<R2> analysis for 260711175133601569

---  normal mode 79  ---

This page gives a visualization of the normalized mean square displacement <R2> of all C-alpha atoms in the protein that are associated to this mode (black bars). The three components of the corresponding eigenvector are shown on the left (colored bars). Here is the raw data for <R2> and for the eigenvector (shift-click on the links for download).

XYZresidue<R2><R2>max = 0.0526
ARG 100.0098
VAL 110.0059
LYS 120.0033
ILE 130.0074
GLY 140.0102
HIS 150.0069
TYR 160.0063
ILE 170.0074
LEU 180.0122
GLY 190.0132
ASP 200.0115
THR 210.0086
LEU 220.0152
GLY 230.0287
VAL 240.0484
GLY 250.0254
THR 260.0185
PHE 270.0170
GLY 280.0222
LYS 290.0201
VAL 300.0150
LYS 310.0114
VAL 320.0152
GLY 330.0157
LYS 340.0174
HIS 350.0070
GLU 360.0149
LEU 370.0221
THR 380.0134
GLY 390.0213
HIS 400.0178
LYS 410.0187
VAL 420.0180
ALA 430.0121
VAL 440.0108
LYS 450.0091
ILE 460.0098
LEU 470.0119
ASN 480.0119
ARG 490.0177
GLN 500.0154
LYS 510.0106
ILE 520.0070
ARG 530.0074
SER 540.0142
LEU 550.0156
ASP 560.0235
VAL 570.0245
VAL 580.0270
GLY 590.0272
LYS 600.0262
ILE 610.0200
ARG 620.0262
ARG 630.0255
GLU 640.0227
ILE 650.0235
GLN 660.0292
ASN 670.0261
LEU 680.0243
LYS 690.0299
LEU 700.0303
PHE 710.0266
ARG 720.0272
HIS 730.0165
PRO 740.0150
HIS 750.0138
ILE 760.0139
ILE 770.0099
LYS 780.0119
LEU 790.0103
TYR 800.0148
GLN 810.0186
VAL 820.0149
ILE 830.0099
SER 840.0080
THR 850.0150
PRO 860.0286
SER 870.0206
ASP 880.0089
ILE 890.0099
PHE 900.0087
MET 910.0085
VAL 920.0112
MET 930.0106
GLU 940.0120
TYR 950.0115
VAL 960.0089
SER 970.0153
GLY 980.0146
GLY 990.0128
GLU 1000.0110
LEU 1010.0122
PHE 1020.0144
ASP 1030.0168
TYR 1040.0167
ILE 1050.0172
CYS 1060.0244
LYS 1070.0304
ASN 1080.0301
GLY 1090.0242
ARG 1100.0198
LEU 1110.0189
ASP 1120.0096
GLU 1130.0102
LYS 1140.0119
GLU 1150.0059
SER 1160.0048
ARG 1170.0058
ARG 1180.0053
LEU 1190.0050
PHE 1200.0050
GLN 1210.0076
GLN 1220.0082
ILE 1230.0096
LEU 1240.0117
SER 1250.0119
GLY 1260.0123
VAL 1270.0153
ASP 1280.0183
TYR 1290.0187
CYS 1300.0182
HIS 1310.0178
ARG 1320.0193
HIS 1330.0215
MET 1340.0172
VAL 1350.0183
VAL 1360.0150
HIS 1370.0149
ARG 1380.0142
ASP 1390.0122
LEU 1400.0108
LYS 1410.0109
PRO 1420.0082
GLU 1430.0073
ASN 1440.0079
VAL 1450.0100
LEU 1460.0084
LEU 1470.0087
ASP 1480.0124
ALA 1490.0193
HIS 1500.0126
MET 1510.0109
ASN 1520.0099
ALA 1530.0104
LYS 1540.0112
ILE 1550.0128
ALA 1560.0125
ASP 1570.0175
PHE 1580.0186
GLY 1590.0175
LEU 1600.0175
SER 1610.0189
ASN 1620.0182
MET 1630.0155
MET 1640.0100
SER 1650.0102
ASP 1660.0056
GLY 1670.0097
GLU 1680.0101
PHE 1690.0170
LEU 1700.0147
ARG 1710.0153
SER 1730.0155
CYS 1740.0149
GLY 1750.0120
SER 1760.0095
PRO 1770.0075
ASN 1780.0049
TYR 1790.0043
ALA 1800.0066
ALA 1810.0089
PRO 1820.0134
GLU 1830.0167
VAL 1840.0143
ILE 1850.0103
SER 1860.0169
GLY 1870.0207
ARG 1880.0233
LEU 1890.0206
TYR 1900.0177
ALA 1910.0146
GLY 1920.0109
PRO 1930.0120
GLU 1940.0145
VAL 1950.0116
ASP 1960.0097
ILE 1970.0074
TRP 1980.0075
SER 1990.0060
SER 2000.0039
GLY 2010.0053
VAL 2020.0054
ILE 2030.0037
LEU 2040.0054
TYR 2050.0067
ALA 2060.0080
LEU 2070.0104
LEU 2080.0111
CYS 2090.0138
GLY 2100.0145
THR 2110.0091
LEU 2120.0116
PRO 2130.0116
PHE 2140.0113
ASP 2150.0095
ASP 2160.0107
ASP 2170.0328
HIS 2180.0176
VAL 2190.0133
PRO 2200.0054
THR 2210.0035
LEU 2220.0034
PHE 2230.0056
LYS 2240.0067
LYS 2250.0044
ILE 2260.0059
CYS 2270.0059
ASP 2280.0063
GLY 2290.0136
ILE 2300.0260
PHE 2310.0258
TYR 2320.0409
THR 2330.0166
PRO 2340.0271
GLN 2350.0457
TYR 2360.0324
LEU 2370.0213
ASN 2380.0166
PRO 2390.0090
SER 2400.0073
VAL 2410.0084
ILE 2420.0095
SER 2430.0081
LEU 2440.0092
LEU 2450.0139
LYS 2460.0131
HIS 2470.0145
MET 2480.0125
LEU 2490.0117
GLN 2500.0153
VAL 2510.0158
ASP 2520.0219
PRO 2530.0218
MET 2540.0264
LYS 2550.0263
ARG 2560.0201
ALA 2570.0167
THR 2580.0099
ILE 2590.0041
LYS 2600.0067
ASP 2610.0094
ILE 2620.0072
ARG 2630.0048
GLU 2640.0074
HIS 2650.0067
GLU 2660.0052
TRP 2670.0026
PHE 2680.0038
LYS 2690.0061
GLN 2700.0067
ASP 2710.0107
LEU 2720.0156
PRO 2730.0114
LYS 2740.0053
TYR 2750.0048
LEU 2760.0076
PHE 2770.0048
PRO 2780.0123
GLU 2790.0181
ASP 2800.0241
ALA 3210.0200
VAL 3220.0091
ALA 3230.0125
TYR 3240.0118
HIS 3250.0134
LEU 3260.0128
ILE 3270.0035
ILE 3280.0123
ASP 3290.0129
ASN 3300.0140
ARG 3310.0123
ARG 3320.0103
ILE 3330.0140
MET 3340.0027
ASN 3350.0143
GLU 3360.0178
ALA 3370.0103
LYS 3380.0131
ASP 3390.0076
PHE 3400.0069
TYR 3410.0132
LEU 3420.0110
ALA 3430.0057
THR 3440.0055
SER 3450.0029
PRO 3460.0046
PRO 3470.0072
ASP 3480.0089
SER 3490.0065
PHE 3500.0034
LEU 3510.0107
ASP 3520.0069
ASP 3530.0119
HIS 3540.0049
HIS 3550.0054
LEU 3560.0069
THR 3570.0073
ARG 3580.0075
PRO 3590.0068
HIS 3600.0036
PRO 3610.0035
GLU 3620.0023
ARG 3630.0021
VAL 3640.0033
PRO 3650.0037
PHE 3660.0058
LEU 3670.0083
VAL 3680.0122
ALA 3690.0105
GLU 3700.0058
THR 3710.0117
PRO 3720.0160
ARG 3730.0069
ALA 3740.0025
ALA 3940.0178
LYS 3950.0147
TRP 3960.0143
HIS 3970.0114
LEU 3980.0117
GLY 3990.0132
ILE 4000.0138
ARG 4010.0150
SER 4020.0176
GLN 4030.0193
SER 4040.0112
ARG 4050.0187
PRO 4060.0114
ASN 4070.0147
ASP 4080.0205
ILE 4090.0141
MET 4100.0136
ALA 4110.0157
GLU 4120.0187
VAL 4130.0169
CYS 4140.0176
ARG 4150.0206
ALA 4160.0174
ILE 4170.0171
LYS 4180.0233
GLN 4190.0187
LEU 4200.0159
ASP 4210.0194
TYR 4220.0159
GLU 4230.0169
TRP 4240.0119
LYS 4250.0090
VAL 4260.0114
VAL 4270.0062
ASN 4280.0059
PRO 4290.0091
TYR 4300.0070
TYR 4310.0052
LEU 4320.0041
ARG 4330.0098
VAL 4340.0099
ARG 4350.0113
ARG 4360.0143
LYS 4370.0136
ASN 4380.0134
PRO 4390.0231
VAL 4400.0242
THR 4410.0141
SER 4420.0122
THR 4430.0112
PHE 4440.0140
SER 4450.0122
LYS 4460.0097
MET 4470.0070
SER 4480.0018
LEU 4490.0018
GLN 4500.0047
LEU 4510.0108
TYR 4520.0101
GLN 4530.0087
VAL 4540.0133
ASP 4550.0203
SER 4560.0232
ARG 4570.0196
THR 4580.0179
TYR 4590.0112
LEU 4600.0091
LEU 4610.0087
ASP 4620.0082
PHE 4630.0047
ARG 4640.0032
SER 4650.0034
ILE 4660.0096
ASP 4670.0143
ASP 4680.0176
GLU 4690.0526
ILE 4700.0056
LYS 2030.0502
SER 2040.0304
PRO 2050.0078
PRO 2060.0145
ILE 2070.0147
LEU 2080.0152
PRO 2090.0227
PRO 2100.0231
HIS 2110.0217
LEU 2120.0175
LEU 2130.0185
GLN 2140.0174
VAL 2150.0125
ILE 2160.0097
LEU 2170.0084
ASN 2180.0102
LYS 2190.0093
ASP 2200.0059
THR 2210.0037
ASN 2220.0038
ILE 2230.0035
SER 2240.0042
CYS 2250.0053
ASP 2260.0061
PRO 2270.0052
ALA 2280.0087
LEU 2290.0076
LEU 2300.0042
PRO 2310.0032
GLU 2320.0053
PRO 2330.0086
ASN 2340.0085
HIS 2350.0062
VAL 2360.0109
MET 2370.0096
LEU 2380.0075
ASN 2390.0057
HIS 2400.0068
LEU 2410.0076
TYR 2420.0127
ALA 2430.0136
LEU 2440.0142
SER 2450.0191
ILE 2460.0146
LYS 2470.0237
ASP 2480.0244
SER 2490.0210
VAL 2500.0239
MET 2510.0136
VAL 2520.0146
LEU 2530.0169
SER 2540.0127
ALA 2550.0105
THR 2560.0080
HIS 2570.0057
ARG 2580.0043
TYR 2590.0037
LYS 2600.0022
LYS 2610.0061
LYS 2620.0073
TYR 2630.0058
VAL 2640.0074
THR 2650.0102
THR 2660.0146
LEU 2670.0159
LEU 2680.0151
TYR 2690.0192
LYS 2700.0169
PRO 2710.0205
PRO 5280.0091
GLY 5290.0083
SER 5300.0098
HIS 5310.0068
THR 5320.0063
ILE 5330.0062
GLU 5340.0069
PHE 5350.0067
PHE 5360.0081
GLU 5370.0056
MET 5380.0056
CYS 5390.0076
ALA 5400.0069
ASN 5410.0035
LEU 5420.0061
ILE 5430.0117
LYS 5440.0092
ILE 5450.0079
LEU 5460.0157
ALA 5470.0242
GLN 5480.0324

If you find results from this site helpful for your research, please cite one of our papers:

elNémo is maintained by Yves-Henri Sanejouand.
It was developed by Karsten Suhre.
Between 2003 and 2014, it was hosted by IGS (Marseille).
Between 2015 and 2025, it was hosted by US2B (Nantes).
Last modification: april 24th, 2026.