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***  Apo AMPK  ***

<R2> analysis for 260711175133601569

---  normal mode 8  ---

This page gives a visualization of the normalized mean square displacement <R2> of all C-alpha atoms in the protein that are associated to this mode (black bars). The three components of the corresponding eigenvector are shown on the left (colored bars). Here is the raw data for <R2> and for the eigenvector (shift-click on the links for download).

XYZresidue<R2><R2>max = 0.0829
ARG 100.0183
VAL 110.0176
LYS 120.0163
ILE 130.0153
GLY 140.0163
HIS 150.0150
TYR 160.0130
ILE 170.0140
LEU 180.0132
GLY 190.0130
ASP 200.0121
THR 210.0121
LEU 220.0099
GLY 230.0092
VAL 240.0103
GLY 250.0088
THR 260.0082
PHE 270.0109
GLY 280.0114
LYS 290.0116
VAL 300.0096
LYS 310.0104
VAL 320.0091
GLY 330.0101
LYS 340.0103
HIS 350.0114
GLU 360.0135
LEU 370.0133
THR 380.0105
GLY 390.0092
HIS 400.0078
LYS 410.0068
VAL 420.0071
ALA 430.0070
VAL 440.0092
LYS 450.0092
ILE 460.0119
LEU 470.0127
ASN 480.0155
ARG 490.0165
GLN 500.0180
LYS 510.0158
ILE 520.0138
ARG 530.0156
SER 540.0163
LEU 550.0136
ASP 560.0119
VAL 570.0102
VAL 580.0116
GLY 590.0097
LYS 600.0075
ILE 610.0082
ARG 620.0093
ARG 630.0071
GLU 640.0059
ILE 650.0077
GLN 660.0083
ASN 670.0062
LEU 680.0059
LYS 690.0084
LEU 700.0089
PHE 710.0070
ARG 720.0073
HIS 730.0063
PRO 740.0056
HIS 750.0042
ILE 760.0031
ILE 770.0027
LYS 780.0051
LEU 790.0069
TYR 800.0089
GLN 810.0109
VAL 820.0119
ILE 830.0143
SER 840.0160
THR 850.0182
PRO 860.0200
SER 870.0190
ASP 880.0162
ILE 890.0139
PHE 900.0123
MET 910.0097
VAL 920.0091
MET 930.0065
GLU 940.0047
TYR 950.0040
VAL 960.0022
SER 970.0037
GLY 980.0053
GLY 990.0056
GLU 1000.0057
LEU 1010.0069
PHE 1020.0082
ASP 1030.0091
TYR 1040.0090
ILE 1050.0108
CYS 1060.0126
LYS 1070.0122
ASN 1080.0129
GLY 1090.0145
ARG 1100.0133
LEU 1110.0125
ASP 1120.0140
GLU 1130.0141
LYS 1140.0134
GLU 1150.0113
SER 1160.0108
ARG 1170.0112
ARG 1180.0100
LEU 1190.0079
PHE 1200.0084
GLN 1210.0090
GLN 1220.0071
ILE 1230.0057
LEU 1240.0070
SER 1250.0074
GLY 1260.0054
VAL 1270.0051
ASP 1280.0072
TYR 1290.0070
CYS 1300.0053
HIS 1310.0062
ARG 1320.0082
HIS 1330.0074
MET 1340.0061
VAL 1350.0047
VAL 1360.0031
HIS 1370.0015
ARG 1380.0015
ASP 1390.0031
LEU 1400.0032
LYS 1410.0050
PRO 1420.0060
GLU 1430.0057
ASN 1440.0035
VAL 1450.0035
LEU 1460.0033
LEU 1470.0037
ASP 1480.0025
ALA 1490.0033
HIS 1500.0048
MET 1510.0055
ASN 1520.0048
ALA 1530.0042
LYS 1540.0022
ILE 1550.0017
ALA 1560.0016
ASP 1570.0029
PHE 1580.0027
GLY 1590.0044
LEU 1600.0029
SER 1610.0020
ASN 1620.0031
MET 1630.0048
MET 1640.0044
SER 1650.0051
ASP 1660.0046
GLY 1670.0048
GLU 1680.0043
PHE 1690.0039
LEU 1700.0024
ARG 1710.0013
SER 1730.0023
CYS 1740.0034
GLY 1750.0040
SER 1760.0059
PRO 1770.0076
ASN 1780.0078
TYR 1790.0064
ALA 1800.0052
ALA 1810.0053
PRO 1820.0058
GLU 1830.0042
VAL 1840.0032
ILE 1850.0048
SER 1860.0042
GLY 1870.0020
ARG 1880.0022
LEU 1890.0026
TYR 1900.0035
ALA 1910.0042
GLY 1920.0036
PRO 1930.0049
GLU 1940.0055
VAL 1950.0039
ASP 1960.0042
ILE 1970.0063
TRP 1980.0065
SER 1990.0055
SER 2000.0066
GLY 2010.0085
VAL 2020.0087
ILE 2030.0080
LEU 2040.0097
TYR 2050.0111
ALA 2060.0107
LEU 2070.0106
LEU 2080.0128
CYS 2090.0138
GLY 2100.0128
THR 2110.0127
LEU 2120.0114
PRO 2130.0118
PHE 2140.0111
ASP 2150.0119
ASP 2160.0132
ASP 2170.0140
HIS 2180.0138
VAL 2190.0115
PRO 2200.0111
THR 2210.0123
LEU 2220.0111
PHE 2230.0092
LYS 2240.0105
LYS 2250.0114
ILE 2260.0094
CYS 2270.0087
ASP 2280.0108
GLY 2290.0112
ILE 2300.0132
PHE 2310.0138
TYR 2320.0157
THR 2330.0161
PRO 2340.0180
GLN 2350.0197
TYR 2360.0189
LEU 2370.0170
ASN 2380.0175
PRO 2390.0181
SER 2400.0169
VAL 2410.0147
ILE 2420.0151
SER 2430.0152
LEU 2440.0131
LEU 2450.0120
LYS 2460.0127
HIS 2470.0119
MET 2480.0097
LEU 2490.0094
GLN 2500.0096
VAL 2510.0081
ASP 2520.0079
PRO 2530.0068
MET 2540.0078
LYS 2550.0099
ARG 2560.0092
ALA 2570.0103
THR 2580.0097
ILE 2590.0096
LYS 2600.0117
ASP 2610.0122
ILE 2620.0116
ARG 2630.0125
GLU 2640.0146
HIS 2650.0146
GLU 2660.0163
TRP 2670.0150
PHE 2680.0132
LYS 2690.0147
GLN 2700.0153
ASP 2710.0145
LEU 2720.0127
PRO 2730.0118
LYS 2740.0131
TYR 2750.0115
LEU 2760.0102
PHE 2770.0110
PRO 2780.0131
GLU 2790.0150
ASP 2800.0154
ALA 3210.0829
VAL 3220.0684
ALA 3230.0584
TYR 3240.0540
HIS 3250.0443
LEU 3260.0394
ILE 3270.0386
ILE 3280.0333
ASP 3290.0236
ASN 3300.0224
ARG 3310.0201
ARG 3320.0141
ILE 3330.0096
MET 3340.0095
ASN 3350.0094
GLU 3360.0053
ALA 3370.0031
LYS 3380.0041
ASP 3390.0061
PHE 3400.0061
TYR 3410.0050
LEU 3420.0024
ALA 3430.0066
THR 3440.0128
SER 3450.0188
PRO 3460.0246
PRO 3470.0331
ASP 3480.0378
SER 3490.0477
PHE 3500.0488
LEU 3510.0602
ASP 3520.0621
ASP 3530.0701
HIS 3540.0647
HIS 3550.0536
LEU 3560.0518
THR 3570.0414
ARG 3580.0385
PRO 3590.0354
HIS 3600.0308
PRO 3610.0379
GLU 3620.0358
ARG 3630.0342
VAL 3640.0426
PRO 3650.0480
PHE 3660.0416
LEU 3670.0411
VAL 3680.0503
ALA 3690.0528
GLU 3700.0463
THR 3710.0473
PRO 3720.0571
ARG 3730.0613
ALA 3740.0526
ALA 3940.0051
LYS 3950.0055
TRP 3960.0053
HIS 3970.0061
LEU 3980.0061
GLY 3990.0064
ILE 4000.0070
ARG 4010.0075
SER 4020.0083
GLN 4030.0089
SER 4040.0092
ARG 4050.0093
PRO 4060.0086
ASN 4070.0089
ASP 4080.0093
ILE 4090.0086
MET 4100.0084
ALA 4110.0090
GLU 4120.0088
VAL 4130.0081
CYS 4140.0083
ARG 4150.0088
ALA 4160.0082
ILE 4170.0079
LYS 4180.0085
GLN 4190.0085
LEU 4200.0079
ASP 4210.0081
TYR 4220.0076
GLU 4230.0076
TRP 4240.0075
LYS 4250.0075
VAL 4260.0076
VAL 4270.0071
ASN 4280.0074
PRO 4290.0078
TYR 4300.0074
TYR 4310.0069
LEU 4320.0069
ARG 4330.0067
VAL 4340.0068
ARG 4350.0067
ARG 4360.0067
LYS 4370.0068
ASN 4380.0064
PRO 4390.0068
VAL 4400.0064
THR 4410.0060
SER 4420.0065
THR 4430.0060
PHE 4440.0061
SER 4450.0057
LYS 4460.0058
MET 4470.0058
SER 4480.0060
LEU 4490.0064
GLN 4500.0065
LEU 4510.0069
TYR 4520.0068
GLN 4530.0073
VAL 4540.0073
ASP 4550.0080
SER 4560.0085
ARG 4570.0089
THR 4580.0083
TYR 4590.0078
LEU 4600.0071
LEU 4610.0069
ASP 4620.0063
PHE 4630.0060
ARG 4640.0054
SER 4650.0051
ILE 4660.0051
ASP 4670.0046
ASP 4680.0050
GLU 4690.0048
ILE 4700.0054
LYS 2030.0079
SER 2040.0078
PRO 2050.0071
PRO 2060.0060
ILE 2070.0061
LEU 2080.0060
PRO 2090.0052
PRO 2100.0057
HIS 2110.0058
LEU 2120.0061
LEU 2130.0064
GLN 2140.0062
VAL 2150.0056
ILE 2160.0041
LEU 2170.0030
ASN 2180.0036
LYS 2190.0065
ASP 2200.0086
THR 2210.0133
ASN 2220.0202
ILE 2230.0261
SER 2240.0252
CYS 2250.0174
ASP 2260.0183
PRO 2270.0202
ALA 2280.0170
LEU 2290.0092
LEU 2300.0019
PRO 2310.0039
GLU 2320.0046
PRO 2330.0044
ASN 2340.0047
HIS 2350.0047
VAL 2360.0049
MET 2370.0050
LEU 2380.0047
ASN 2390.0046
HIS 2400.0051
LEU 2410.0053
TYR 2420.0054
ALA 2430.0054
LEU 2440.0054
SER 2450.0061
ILE 2460.0063
LYS 2470.0063
ASP 2480.0064
SER 2490.0063
VAL 2500.0057
MET 2510.0056
VAL 2520.0050
LEU 2530.0049
SER 2540.0043
ALA 2550.0042
THR 2560.0037
HIS 2570.0036
ARG 2580.0033
TYR 2590.0029
LYS 2600.0032
LYS 2610.0024
LYS 2620.0020
TYR 2630.0029
VAL 2640.0024
THR 2650.0026
THR 2660.0032
LEU 2670.0036
LEU 2680.0041
TYR 2690.0045
LYS 2700.0051
PRO 2710.0057
PRO 5280.0049
GLY 5290.0047
SER 5300.0042
HIS 5310.0045
THR 5320.0042
ILE 5330.0045
GLU 5340.0051
PHE 5350.0052
PHE 5360.0051
GLU 5370.0056
MET 5380.0061
CYS 5390.0061
ALA 5400.0062
ASN 5410.0068
LEU 5420.0071
ILE 5430.0070
LYS 5440.0073
ILE 5450.0079
LEU 5460.0079
ALA 5470.0077
GLN 5480.0083

If you find results from this site helpful for your research, please cite one of our papers:

elNémo is maintained by Yves-Henri Sanejouand.
It was developed by Karsten Suhre.
Between 2003 and 2014, it was hosted by IGS (Marseille).
Between 2015 and 2025, it was hosted by US2B (Nantes).
Last modification: april 24th, 2026.