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***  Apo AMPK  ***

<R2> analysis for 260711175133601569

---  normal mode 80  ---

This page gives a visualization of the normalized mean square displacement <R2> of all C-alpha atoms in the protein that are associated to this mode (black bars). The three components of the corresponding eigenvector are shown on the left (colored bars). Here is the raw data for <R2> and for the eigenvector (shift-click on the links for download).

XYZresidue<R2><R2>max = 0.1879
ARG 100.0026
VAL 110.0022
LYS 120.0016
ILE 130.0009
GLY 140.0011
HIS 150.0011
TYR 160.0015
ILE 170.0016
LEU 180.0020
GLY 190.0028
ASP 200.0022
THR 210.0021
LEU 220.0033
GLY 230.0059
VAL 240.0098
GLY 250.0054
THR 260.0042
PHE 270.0031
GLY 280.0032
LYS 290.0029
VAL 300.0020
LYS 310.0011
VAL 320.0021
GLY 330.0027
LYS 340.0031
HIS 350.0013
GLU 360.0025
LEU 370.0039
THR 380.0020
GLY 390.0031
HIS 400.0027
LYS 410.0034
VAL 420.0034
ALA 430.0021
VAL 440.0015
LYS 450.0011
ILE 460.0010
LEU 470.0013
ASN 480.0013
ARG 490.0007
GLN 500.0021
LYS 510.0017
ILE 520.0007
ARG 530.0031
SER 540.0044
LEU 550.0015
ASP 560.0043
VAL 570.0042
VAL 580.0030
GLY 590.0050
LYS 600.0064
ILE 610.0044
ARG 620.0044
ARG 630.0042
GLU 640.0031
ILE 650.0028
GLN 660.0019
ASN 670.0010
LEU 680.0024
LYS 690.0033
LEU 700.0044
PHE 710.0042
ARG 720.0057
HIS 730.0041
PRO 740.0036
HIS 750.0036
ILE 760.0040
ILE 770.0041
LYS 780.0042
LEU 790.0027
TYR 800.0025
GLN 810.0015
VAL 820.0005
ILE 830.0006
SER 840.0014
THR 850.0029
PRO 860.0035
SER 870.0029
ASP 880.0017
ILE 890.0011
PHE 900.0010
MET 910.0009
VAL 920.0018
MET 930.0026
GLU 940.0040
TYR 950.0036
VAL 960.0040
SER 970.0103
GLY 980.0128
GLY 990.0130
GLU 1000.0070
LEU 1010.0058
PHE 1020.0042
ASP 1030.0056
TYR 1040.0074
ILE 1050.0031
CYS 1060.0109
LYS 1070.0157
ASN 1080.0144
GLY 1090.0053
ARG 1100.0040
LEU 1110.0048
ASP 1120.0034
GLU 1130.0013
LYS 1140.0011
GLU 1150.0030
SER 1160.0039
ARG 1170.0035
ARG 1180.0034
LEU 1190.0044
PHE 1200.0044
GLN 1210.0046
GLN 1220.0041
ILE 1230.0048
LEU 1240.0054
SER 1250.0052
GLY 1260.0049
VAL 1270.0044
ASP 1280.0045
TYR 1290.0049
CYS 1300.0033
HIS 1310.0026
ARG 1320.0040
HIS 1330.0019
MET 1340.0025
VAL 1350.0013
VAL 1360.0022
HIS 1370.0023
ARG 1380.0035
ASP 1390.0009
LEU 1400.0013
LYS 1410.0024
PRO 1420.0034
GLU 1430.0031
ASN 1440.0031
VAL 1450.0060
LEU 1460.0056
LEU 1470.0047
ASP 1480.0084
ALA 1490.0248
HIS 1500.0215
MET 1510.0061
ASN 1520.0016
ALA 1530.0041
LYS 1540.0033
ILE 1550.0036
ALA 1560.0034
ASP 1570.0032
PHE 1580.0025
GLY 1590.0038
LEU 1600.0049
SER 1610.0039
ASN 1620.0043
MET 1630.0052
MET 1640.0059
SER 1650.0081
ASP 1660.0082
GLY 1670.0081
GLU 1680.0073
PHE 1690.0096
LEU 1700.0095
ARG 1710.0096
SER 1730.0092
CYS 1740.0084
GLY 1750.0068
SER 1760.0045
PRO 1770.0040
ASN 1780.0036
TYR 1790.0031
ALA 1800.0037
ALA 1810.0033
PRO 1820.0062
GLU 1830.0083
VAL 1840.0091
ILE 1850.0097
SER 1860.0110
GLY 1870.0138
ARG 1880.0126
LEU 1890.0112
TYR 1900.0102
ALA 1910.0096
GLY 1920.0068
PRO 1930.0033
GLU 1940.0040
VAL 1950.0045
ASP 1960.0027
ILE 1970.0013
TRP 1980.0013
SER 1990.0015
SER 2000.0011
GLY 2010.0011
VAL 2020.0013
ILE 2030.0023
LEU 2040.0024
TYR 2050.0031
ALA 2060.0031
LEU 2070.0032
LEU 2080.0022
CYS 2090.0030
GLY 2100.0032
THR 2110.0027
LEU 2120.0024
PRO 2130.0026
PHE 2140.0028
ASP 2150.0060
ASP 2160.0130
ASP 2170.0276
HIS 2180.0085
VAL 2190.0169
PRO 2200.0213
THR 2210.0102
LEU 2220.0065
PHE 2230.0088
LYS 2240.0106
LYS 2250.0074
ILE 2260.0055
CYS 2270.0053
ASP 2280.0029
GLY 2290.0057
ILE 2300.0128
PHE 2310.0104
TYR 2320.0140
THR 2330.0082
PRO 2340.0119
GLN 2350.0140
TYR 2360.0109
LEU 2370.0065
ASN 2380.0056
PRO 2390.0031
SER 2400.0046
VAL 2410.0022
ILE 2420.0020
SER 2430.0035
LEU 2440.0040
LEU 2450.0027
LYS 2460.0033
HIS 2470.0030
MET 2480.0011
LEU 2490.0010
GLN 2500.0011
VAL 2510.0036
ASP 2520.0047
PRO 2530.0057
MET 2540.0054
LYS 2550.0040
ARG 2560.0033
ALA 2570.0018
THR 2580.0035
ILE 2590.0048
LYS 2600.0082
ASP 2610.0064
ILE 2620.0056
ARG 2630.0069
GLU 2640.0080
HIS 2650.0074
GLU 2660.0090
TRP 2670.0058
PHE 2680.0055
LYS 2690.0061
GLN 2700.0066
ASP 2710.0064
LEU 2720.0080
PRO 2730.0070
LYS 2740.0095
TYR 2750.0074
LEU 2760.0059
PHE 2770.0059
PRO 2780.0158
GLU 2790.0089
ASP 2800.0129
ALA 3210.0108
VAL 3220.0072
ALA 3230.0140
TYR 3240.0172
HIS 3250.0144
LEU 3260.0081
ILE 3270.0052
ILE 3280.0092
ASP 3290.0045
ASN 3300.0116
ARG 3310.0177
ARG 3320.0130
ILE 3330.0092
MET 3340.0102
ASN 3350.0111
GLU 3360.0089
ALA 3370.0090
LYS 3380.0060
ASP 3390.0104
PHE 3400.0103
TYR 3410.0102
LEU 3420.0100
ALA 3430.0109
THR 3440.0127
SER 3450.0142
PRO 3460.0069
PRO 3470.0082
ASP 3480.0119
SER 3490.0104
PHE 3500.0117
LEU 3510.0070
ASP 3520.0038
ASP 3530.0062
HIS 3540.0030
HIS 3550.0026
LEU 3560.0031
THR 3570.0095
ARG 3580.0121
PRO 3590.0074
HIS 3600.0034
PRO 3610.0089
GLU 3620.0104
ARG 3630.0075
VAL 3640.0090
PRO 3650.0155
PHE 3660.0151
LEU 3670.0076
VAL 3680.0143
ALA 3690.0139
GLU 3700.0145
THR 3710.0171
PRO 3720.0162
ARG 3730.0074
ALA 3740.0118
ALA 3940.0031
LYS 3950.0028
TRP 3960.0037
HIS 3970.0071
LEU 3980.0086
GLY 3990.0094
ILE 4000.0212
ARG 4010.0212
SER 4020.0250
GLN 4030.0217
SER 4040.0531
ARG 4050.0564
PRO 4060.0144
ASN 4070.0133
ASP 4080.0273
ILE 4090.0187
MET 4100.0226
ALA 4110.0255
GLU 4120.0173
VAL 4130.0143
CYS 4140.0210
ARG 4150.0198
ALA 4160.0112
ILE 4170.0071
LYS 4180.0177
GLN 4190.0226
LEU 4200.0165
ASP 4210.0132
TYR 4220.0059
GLU 4230.0047
TRP 4240.0134
LYS 4250.0238
VAL 4260.0312
VAL 4270.0360
ASN 4280.0325
PRO 4290.0270
TYR 4300.0148
TYR 4310.0176
LEU 4320.0169
ARG 4330.0159
VAL 4340.0115
ARG 4350.0127
ARG 4360.0262
LYS 4370.0214
ASN 4380.0183
PRO 4390.0347
VAL 4400.0362
THR 4410.0219
SER 4420.0119
THR 4430.0090
PHE 4440.0177
SER 4450.0172
LYS 4460.0161
MET 4470.0135
SER 4480.0120
LEU 4490.0117
GLN 4500.0135
LEU 4510.0108
TYR 4520.0098
GLN 4530.0120
VAL 4540.0245
ASP 4550.0269
SER 4560.0254
ARG 4570.0094
THR 4580.0130
TYR 4590.0133
LEU 4600.0153
LEU 4610.0142
ASP 4620.0117
PHE 4630.0071
ARG 4640.0061
SER 4650.0074
ILE 4660.0161
ASP 4670.0201
ASP 4680.0329
GLU 4690.1879
ILE 4700.0290
LYS 2030.0230
SER 2040.0108
PRO 2050.0056
PRO 2060.0075
ILE 2070.0120
LEU 2080.0139
PRO 2090.0113
PRO 2100.0114
HIS 2110.0103
LEU 2120.0088
LEU 2130.0122
GLN 2140.0098
VAL 2150.0081
ILE 2160.0076
LEU 2170.0081
ASN 2180.0089
LYS 2190.0048
ASP 2200.0064
THR 2210.0120
ASN 2220.0104
ILE 2230.0073
SER 2240.0069
CYS 2250.0073
ASP 2260.0059
PRO 2270.0084
ALA 2280.0083
LEU 2290.0101
LEU 2300.0083
PRO 2310.0085
GLU 2320.0087
PRO 2330.0098
ASN 2340.0098
HIS 2350.0086
VAL 2360.0093
MET 2370.0084
LEU 2380.0073
ASN 2390.0045
HIS 2400.0017
LEU 2410.0008
TYR 2420.0038
ALA 2430.0036
LEU 2440.0035
SER 2450.0045
ILE 2460.0058
LYS 2470.0097
ASP 2480.0110
SER 2490.0121
VAL 2500.0088
MET 2510.0046
VAL 2520.0030
LEU 2530.0025
SER 2540.0039
ALA 2550.0054
THR 2560.0069
HIS 2570.0058
ARG 2580.0016
TYR 2590.0120
LYS 2600.0151
LYS 2610.0078
LYS 2620.0156
TYR 2630.0080
VAL 2640.0076
THR 2650.0090
THR 2660.0063
LEU 2670.0050
LEU 2680.0031
TYR 2690.0069
LYS 2700.0085
PRO 2710.0164
PRO 5280.0122
GLY 5290.0058
SER 5300.0059
HIS 5310.0097
THR 5320.0081
ILE 5330.0043
GLU 5340.0091
PHE 5350.0087
PHE 5360.0059
GLU 5370.0092
MET 5380.0114
CYS 5390.0084
ALA 5400.0095
ASN 5410.0083
LEU 5420.0042
ILE 5430.0064
LYS 5440.0100
ILE 5450.0094
LEU 5460.0042
ALA 5470.0192
GLN 5480.0324

If you find results from this site helpful for your research, please cite one of our papers:

elNémo is maintained by Yves-Henri Sanejouand.
It was developed by Karsten Suhre.
Between 2003 and 2014, it was hosted by IGS (Marseille).
Between 2015 and 2025, it was hosted by US2B (Nantes).
Last modification: april 24th, 2026.