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***  Apo AMPK  ***

<R2> analysis for 260711175133601569

---  normal mode 81  ---

This page gives a visualization of the normalized mean square displacement <R2> of all C-alpha atoms in the protein that are associated to this mode (black bars). The three components of the corresponding eigenvector are shown on the left (colored bars). Here is the raw data for <R2> and for the eigenvector (shift-click on the links for download).

XYZresidue<R2><R2>max = 0.0684
ARG 100.0075
VAL 110.0063
LYS 120.0048
ILE 130.0053
GLY 140.0048
HIS 150.0040
TYR 160.0034
ILE 170.0045
LEU 180.0064
GLY 190.0089
ASP 200.0136
THR 210.0084
LEU 220.0070
GLY 230.0048
VAL 240.0059
GLY 250.0073
THR 260.0061
PHE 270.0091
GLY 280.0106
LYS 290.0061
VAL 300.0040
LYS 310.0036
VAL 320.0067
GLY 330.0063
LYS 340.0066
HIS 350.0043
GLU 360.0058
LEU 370.0092
THR 380.0086
GLY 390.0088
HIS 400.0050
LYS 410.0059
VAL 420.0063
ALA 430.0055
VAL 440.0045
LYS 450.0047
ILE 460.0066
LEU 470.0088
ASN 480.0078
ARG 490.0076
GLN 500.0103
LYS 510.0137
ILE 520.0120
ARG 530.0123
SER 540.0252
LEU 550.0157
ASP 560.0079
VAL 570.0202
VAL 580.0182
GLY 590.0194
LYS 600.0199
ILE 610.0164
ARG 620.0168
ARG 630.0130
GLU 640.0116
ILE 650.0099
GLN 660.0102
ASN 670.0107
LEU 680.0093
LYS 690.0091
LEU 700.0111
PHE 710.0113
ARG 720.0112
HIS 730.0063
PRO 740.0057
HIS 750.0049
ILE 760.0060
ILE 770.0044
LYS 780.0043
LEU 790.0015
TYR 800.0056
GLN 810.0066
VAL 820.0082
ILE 830.0102
SER 840.0117
THR 850.0112
PRO 860.0115
SER 870.0064
ASP 880.0055
ILE 890.0075
PHE 900.0062
MET 910.0051
VAL 920.0049
MET 930.0043
GLU 940.0063
TYR 950.0061
VAL 960.0060
SER 970.0085
GLY 980.0089
GLY 990.0088
GLU 1000.0074
LEU 1010.0068
PHE 1020.0060
ASP 1030.0091
TYR 1040.0102
ILE 1050.0094
CYS 1060.0271
LYS 1070.0291
ASN 1080.0246
GLY 1090.0084
ARG 1100.0083
LEU 1110.0091
ASP 1120.0102
GLU 1130.0093
LYS 1140.0111
GLU 1150.0097
SER 1160.0082
ARG 1170.0080
ARG 1180.0066
LEU 1190.0064
PHE 1200.0056
GLN 1210.0039
GLN 1220.0040
ILE 1230.0046
LEU 1240.0034
SER 1250.0042
GLY 1260.0046
VAL 1270.0062
ASP 1280.0054
TYR 1290.0086
CYS 1300.0122
HIS 1310.0091
ARG 1320.0078
HIS 1330.0184
MET 1340.0190
VAL 1350.0153
VAL 1360.0158
HIS 1370.0120
ARG 1380.0088
ASP 1390.0030
LEU 1400.0045
LYS 1410.0053
PRO 1420.0049
GLU 1430.0040
ASN 1440.0026
VAL 1450.0028
LEU 1460.0046
LEU 1470.0064
ASP 1480.0081
ALA 1490.0146
HIS 1500.0160
MET 1510.0097
ASN 1520.0069
ALA 1530.0052
LYS 1540.0048
ILE 1550.0042
ALA 1560.0035
ASP 1570.0062
PHE 1580.0075
GLY 1590.0071
LEU 1600.0109
SER 1610.0137
ASN 1620.0178
MET 1630.0213
MET 1640.0238
SER 1650.0305
ASP 1660.0289
GLY 1670.0254
GLU 1680.0240
PHE 1690.0248
LEU 1700.0264
ARG 1710.0241
SER 1730.0155
CYS 1740.0116
GLY 1750.0037
SER 1760.0108
PRO 1770.0117
ASN 1780.0103
TYR 1790.0056
ALA 1800.0046
ALA 1810.0039
PRO 1820.0070
GLU 1830.0067
VAL 1840.0076
ILE 1850.0046
SER 1860.0161
GLY 1870.0207
ARG 1880.0201
LEU 1890.0186
TYR 1900.0130
ALA 1910.0188
GLY 1920.0160
PRO 1930.0149
GLU 1940.0082
VAL 1950.0053
ASP 1960.0073
ILE 1970.0068
TRP 1980.0055
SER 1990.0061
SER 2000.0058
GLY 2010.0060
VAL 2020.0070
ILE 2030.0080
LEU 2040.0063
TYR 2050.0066
ALA 2060.0063
LEU 2070.0063
LEU 2080.0049
CYS 2090.0065
GLY 2100.0044
THR 2110.0045
LEU 2120.0045
PRO 2130.0054
PHE 2140.0041
ASP 2150.0106
ASP 2160.0193
ASP 2170.0360
HIS 2180.0088
VAL 2190.0183
PRO 2200.0367
THR 2210.0206
LEU 2220.0067
PHE 2230.0141
LYS 2240.0178
LYS 2250.0094
ILE 2260.0056
CYS 2270.0069
ASP 2280.0068
GLY 2290.0091
ILE 2300.0132
PHE 2310.0152
TYR 2320.0238
THR 2330.0120
PRO 2340.0262
GLN 2350.0332
TYR 2360.0055
LEU 2370.0038
ASN 2380.0056
PRO 2390.0053
SER 2400.0053
VAL 2410.0033
ILE 2420.0050
SER 2430.0042
LEU 2440.0036
LEU 2450.0064
LYS 2460.0064
HIS 2470.0062
MET 2480.0068
LEU 2490.0067
GLN 2500.0065
VAL 2510.0071
ASP 2520.0066
PRO 2530.0040
MET 2540.0066
LYS 2550.0092
ARG 2560.0083
ALA 2570.0063
THR 2580.0060
ILE 2590.0063
LYS 2600.0080
ASP 2610.0065
ILE 2620.0051
ARG 2630.0058
GLU 2640.0048
HIS 2650.0037
GLU 2660.0048
TRP 2670.0055
PHE 2680.0062
LYS 2690.0073
GLN 2700.0096
ASP 2710.0126
LEU 2720.0110
PRO 2730.0145
LYS 2740.0188
TYR 2750.0139
LEU 2760.0081
PHE 2770.0114
PRO 2780.0245
GLU 2790.0270
ASP 2800.0268
ALA 3210.0153
VAL 3220.0131
ALA 3230.0152
TYR 3240.0179
HIS 3250.0194
LEU 3260.0198
ILE 3270.0086
ILE 3280.0071
ASP 3290.0029
ASN 3300.0188
ARG 3310.0130
ARG 3320.0178
ILE 3330.0319
MET 3340.0132
ASN 3350.0214
GLU 3360.0275
ALA 3370.0153
LYS 3380.0101
ASP 3390.0192
PHE 3400.0220
TYR 3410.0194
LEU 3420.0137
ALA 3430.0122
THR 3440.0165
SER 3450.0172
PRO 3460.0127
PRO 3470.0130
ASP 3480.0144
SER 3490.0147
PHE 3500.0100
LEU 3510.0178
ASP 3520.0118
ASP 3530.0133
HIS 3540.0071
HIS 3550.0085
LEU 3560.0107
THR 3570.0050
ARG 3580.0123
PRO 3590.0050
HIS 3600.0056
PRO 3610.0097
GLU 3620.0114
ARG 3630.0129
VAL 3640.0131
PRO 3650.0183
PHE 3660.0133
LEU 3670.0087
VAL 3680.0075
ALA 3690.0206
GLU 3700.0270
THR 3710.0120
PRO 3720.0078
ARG 3730.0082
ALA 3740.0262
ALA 3940.0327
LYS 3950.0223
TRP 3960.0106
HIS 3970.0029
LEU 3980.0071
GLY 3990.0120
ILE 4000.0165
ARG 4010.0167
SER 4020.0157
GLN 4030.0241
SER 4040.0405
ARG 4050.0337
PRO 4060.0078
ASN 4070.0076
ASP 4080.0182
ILE 4090.0150
MET 4100.0137
ALA 4110.0106
GLU 4120.0050
VAL 4130.0047
CYS 4140.0044
ARG 4150.0109
ALA 4160.0136
ILE 4170.0127
LYS 4180.0180
GLN 4190.0185
LEU 4200.0181
ASP 4210.0200
TYR 4220.0169
GLU 4230.0187
TRP 4240.0149
LYS 4250.0172
VAL 4260.0156
VAL 4270.0195
ASN 4280.0158
PRO 4290.0105
TYR 4300.0103
TYR 4310.0116
LEU 4320.0084
ARG 4330.0101
VAL 4340.0106
ARG 4350.0121
ARG 4360.0151
LYS 4370.0129
ASN 4380.0114
PRO 4390.0136
VAL 4400.0223
THR 4410.0275
SER 4420.0175
THR 4430.0196
PHE 4440.0196
SER 4450.0106
LYS 4460.0094
MET 4470.0101
SER 4480.0095
LEU 4490.0111
GLN 4500.0150
LEU 4510.0173
TYR 4520.0172
GLN 4530.0172
VAL 4540.0222
ASP 4550.0222
SER 4560.0235
ARG 4570.0169
THR 4580.0199
TYR 4590.0199
LEU 4600.0149
LEU 4610.0154
ASP 4620.0149
PHE 4630.0101
ARG 4640.0104
SER 4650.0110
ILE 4660.0063
ASP 4670.0067
ASP 4680.0085
GLU 4690.0351
ILE 4700.0142
LYS 2030.0417
SER 2040.0146
PRO 2050.0163
PRO 2060.0177
ILE 2070.0192
LEU 2080.0194
PRO 2090.0126
PRO 2100.0039
HIS 2110.0090
LEU 2120.0103
LEU 2130.0041
GLN 2140.0114
VAL 2150.0152
ILE 2160.0173
LEU 2170.0152
ASN 2180.0185
LYS 2190.0129
ASP 2200.0107
THR 2210.0114
ASN 2220.0090
ILE 2230.0069
SER 2240.0056
CYS 2250.0062
ASP 2260.0050
PRO 2270.0063
ALA 2280.0053
LEU 2290.0107
LEU 2300.0109
PRO 2310.0144
GLU 2320.0173
PRO 2330.0228
ASN 2340.0254
HIS 2350.0257
VAL 2360.0242
MET 2370.0194
LEU 2380.0208
ASN 2390.0139
HIS 2400.0122
LEU 2410.0086
TYR 2420.0056
ALA 2430.0036
LEU 2440.0116
SER 2450.0326
ILE 2460.0252
LYS 2470.0141
ASP 2480.0226
SER 2490.0273
VAL 2500.0110
MET 2510.0084
VAL 2520.0079
LEU 2530.0061
SER 2540.0077
ALA 2550.0123
THR 2560.0164
HIS 2570.0152
ARG 2580.0125
TYR 2590.0079
LYS 2600.0277
LYS 2610.0304
LYS 2620.0335
TYR 2630.0172
VAL 2640.0146
THR 2650.0170
THR 2660.0092
LEU 2670.0069
LEU 2680.0058
TYR 2690.0103
LYS 2700.0109
PRO 2710.0122
PRO 5280.0203
GLY 5290.0201
SER 5300.0219
HIS 5310.0117
THR 5320.0108
ILE 5330.0144
GLU 5340.0127
PHE 5350.0116
PHE 5360.0126
GLU 5370.0146
MET 5380.0159
CYS 5390.0151
ALA 5400.0155
ASN 5410.0159
LEU 5420.0162
ILE 5430.0148
LYS 5440.0111
ILE 5450.0097
LEU 5460.0192
ALA 5470.0435
GLN 5480.0684

If you find results from this site helpful for your research, please cite one of our papers:

elNémo is maintained by Yves-Henri Sanejouand.
It was developed by Karsten Suhre.
Between 2003 and 2014, it was hosted by IGS (Marseille).
Between 2015 and 2025, it was hosted by US2B (Nantes).
Last modification: april 24th, 2026.