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***  Apo AMPK  ***

<R2> analysis for 260711175133601569

---  normal mode 84  ---

This page gives a visualization of the normalized mean square displacement <R2> of all C-alpha atoms in the protein that are associated to this mode (black bars). The three components of the corresponding eigenvector are shown on the left (colored bars). Here is the raw data for <R2> and for the eigenvector (shift-click on the links for download).

XYZresidue<R2><R2>max = 0.0654
ARG 100.0163
VAL 110.0142
LYS 120.0085
ILE 130.0097
GLY 140.0079
HIS 150.0058
TYR 160.0058
ILE 170.0062
LEU 180.0092
GLY 190.0123
ASP 200.0163
THR 210.0103
LEU 220.0054
GLY 230.0011
VAL 240.0071
GLY 250.0068
THR 260.0089
PHE 270.0060
GLY 280.0040
LYS 290.0026
VAL 300.0021
LYS 310.0054
VAL 320.0082
GLY 330.0087
LYS 340.0083
HIS 350.0033
GLU 360.0059
LEU 370.0166
THR 380.0075
GLY 390.0050
HIS 400.0105
LYS 410.0096
VAL 420.0074
ALA 430.0035
VAL 440.0039
LYS 450.0023
ILE 460.0024
LEU 470.0030
ASN 480.0044
ARG 490.0069
GLN 500.0026
LYS 510.0082
ILE 520.0112
ARG 530.0091
SER 540.0222
LEU 550.0181
ASP 560.0108
VAL 570.0160
VAL 580.0100
GLY 590.0126
LYS 600.0123
ILE 610.0053
ARG 620.0088
ARG 630.0061
GLU 640.0055
ILE 650.0062
GLN 660.0092
ASN 670.0097
LEU 680.0108
LYS 690.0107
LEU 700.0104
PHE 710.0119
ARG 720.0148
HIS 730.0133
PRO 740.0144
HIS 750.0139
ILE 760.0177
ILE 770.0176
LYS 780.0166
LEU 790.0118
TYR 800.0107
GLN 810.0102
VAL 820.0065
ILE 830.0049
SER 840.0050
THR 850.0163
PRO 860.0262
SER 870.0166
ASP 880.0049
ILE 890.0034
PHE 900.0060
MET 910.0046
VAL 920.0053
MET 930.0061
GLU 940.0090
TYR 950.0052
VAL 960.0093
SER 970.0060
GLY 980.0143
GLY 990.0255
GLU 1000.0235
LEU 1010.0176
PHE 1020.0179
ASP 1030.0269
TYR 1040.0217
ILE 1050.0166
CYS 1060.0477
LYS 1070.0537
ASN 1080.0380
GLY 1090.0171
ARG 1100.0116
LEU 1110.0093
ASP 1120.0129
GLU 1130.0107
LYS 1140.0140
GLU 1150.0079
SER 1160.0054
ARG 1170.0061
ARG 1180.0062
LEU 1190.0041
PHE 1200.0030
GLN 1210.0054
GLN 1220.0070
ILE 1230.0073
LEU 1240.0046
SER 1250.0035
GLY 1260.0053
VAL 1270.0040
ASP 1280.0015
TYR 1290.0040
CYS 1300.0048
HIS 1310.0034
ARG 1320.0063
HIS 1330.0070
MET 1340.0058
VAL 1350.0063
VAL 1360.0076
HIS 1370.0086
ARG 1380.0073
ASP 1390.0096
LEU 1400.0097
LYS 1410.0101
PRO 1420.0139
GLU 1430.0190
ASN 1440.0202
VAL 1450.0198
LEU 1460.0167
LEU 1470.0102
ASP 1480.0146
ALA 1490.0596
HIS 1500.0637
MET 1510.0129
ASN 1520.0111
ALA 1530.0158
LYS 1540.0151
ILE 1550.0185
ALA 1560.0206
ASP 1570.0148
PHE 1580.0119
GLY 1590.0101
LEU 1600.0075
SER 1610.0074
ASN 1620.0053
MET 1630.0054
MET 1640.0051
SER 1650.0061
ASP 1660.0068
GLY 1670.0067
GLU 1680.0057
PHE 1690.0065
LEU 1700.0047
ARG 1710.0039
SER 1730.0044
CYS 1740.0066
GLY 1750.0072
SER 1760.0061
PRO 1770.0047
ASN 1780.0050
TYR 1790.0036
ALA 1800.0039
ALA 1810.0048
PRO 1820.0055
GLU 1830.0060
VAL 1840.0044
ILE 1850.0054
SER 1860.0067
GLY 1870.0068
ARG 1880.0063
LEU 1890.0061
TYR 1900.0065
ALA 1910.0055
GLY 1920.0043
PRO 1930.0041
GLU 1940.0046
VAL 1950.0022
ASP 1960.0021
ILE 1970.0028
TRP 1980.0032
SER 1990.0030
SER 2000.0052
GLY 2010.0050
VAL 2020.0051
ILE 2030.0082
LEU 2040.0083
TYR 2050.0083
ALA 2060.0064
LEU 2070.0074
LEU 2080.0094
CYS 2090.0130
GLY 2100.0051
THR 2110.0054
LEU 2120.0069
PRO 2130.0081
PHE 2140.0071
ASP 2150.0093
ASP 2160.0082
ASP 2170.0101
HIS 2180.0111
VAL 2190.0062
PRO 2200.0056
THR 2210.0033
LEU 2220.0049
PHE 2230.0042
LYS 2240.0050
LYS 2250.0064
ILE 2260.0072
CYS 2270.0065
ASP 2280.0057
GLY 2290.0048
ILE 2300.0056
PHE 2310.0123
TYR 2320.0208
THR 2330.0126
PRO 2340.0470
GLN 2350.0654
TYR 2360.0162
LEU 2370.0104
ASN 2380.0041
PRO 2390.0066
SER 2400.0030
VAL 2410.0051
ILE 2420.0076
SER 2430.0041
LEU 2440.0026
LEU 2450.0047
LYS 2460.0036
HIS 2470.0027
MET 2480.0044
LEU 2490.0046
GLN 2500.0045
VAL 2510.0063
ASP 2520.0076
PRO 2530.0074
MET 2540.0082
LYS 2550.0063
ARG 2560.0045
ALA 2570.0042
THR 2580.0044
ILE 2590.0060
LYS 2600.0070
ASP 2610.0068
ILE 2620.0069
ARG 2630.0069
GLU 2640.0072
HIS 2650.0064
GLU 2660.0074
TRP 2670.0069
PHE 2680.0070
LYS 2690.0086
GLN 2700.0090
ASP 2710.0084
LEU 2720.0100
PRO 2730.0098
LYS 2740.0101
TYR 2750.0012
LEU 2760.0034
PHE 2770.0089
PRO 2780.0347
GLU 2790.0306
ASP 2800.0238
ALA 3210.0190
VAL 3220.0146
ALA 3230.0244
TYR 3240.0196
HIS 3250.0128
LEU 3260.0138
ILE 3270.0122
ILE 3280.0105
ASP 3290.0094
ASN 3300.0251
ARG 3310.0177
ARG 3320.0144
ILE 3330.0235
MET 3340.0086
ASN 3350.0287
GLU 3360.0292
ALA 3370.0173
LYS 3380.0199
ASP 3390.0389
PHE 3400.0370
TYR 3410.0183
LEU 3420.0107
ALA 3430.0118
THR 3440.0215
SER 3450.0269
PRO 3460.0034
PRO 3470.0164
ASP 3480.0185
SER 3490.0176
PHE 3500.0309
LEU 3510.0232
ASP 3520.0145
ASP 3530.0068
HIS 3540.0141
HIS 3550.0180
LEU 3560.0018
THR 3570.0043
ARG 3580.0099
PRO 3590.0047
HIS 3600.0060
PRO 3610.0063
GLU 3620.0059
ARG 3630.0015
VAL 3640.0041
PRO 3650.0077
PHE 3660.0058
LEU 3670.0065
VAL 3680.0029
ALA 3690.0132
GLU 3700.0214
THR 3710.0142
PRO 3720.0123
ARG 3730.0064
ALA 3740.0218
ALA 3940.0295
LYS 3950.0231
TRP 3960.0141
HIS 3970.0079
LEU 3980.0035
GLY 3990.0081
ILE 4000.0063
ARG 4010.0054
SER 4020.0044
GLN 4030.0102
SER 4040.0181
ARG 4050.0144
PRO 4060.0091
ASN 4070.0110
ASP 4080.0153
ILE 4090.0130
MET 4100.0127
ALA 4110.0145
GLU 4120.0139
VAL 4130.0087
CYS 4140.0147
ARG 4150.0148
ALA 4160.0087
ILE 4170.0142
LYS 4180.0241
GLN 4190.0241
LEU 4200.0256
ASP 4210.0256
TYR 4220.0158
GLU 4230.0132
TRP 4240.0086
LYS 4250.0086
VAL 4260.0102
VAL 4270.0105
ASN 4280.0075
PRO 4290.0047
TYR 4300.0060
TYR 4310.0057
LEU 4320.0029
ARG 4330.0031
VAL 4340.0052
ARG 4350.0066
ARG 4360.0154
LYS 4370.0135
ASN 4380.0060
PRO 4390.0290
VAL 4400.0293
THR 4410.0145
SER 4420.0114
THR 4430.0085
PHE 4440.0119
SER 4450.0089
LYS 4460.0078
MET 4470.0078
SER 4480.0050
LEU 4490.0065
GLN 4500.0082
LEU 4510.0079
TYR 4520.0076
GLN 4530.0084
VAL 4540.0132
ASP 4550.0165
SER 4560.0178
ARG 4570.0128
THR 4580.0117
TYR 4590.0083
LEU 4600.0059
LEU 4610.0071
ASP 4620.0072
PHE 4630.0062
ARG 4640.0057
SER 4650.0057
ILE 4660.0075
ASP 4670.0081
ASP 4680.0074
GLU 4690.0180
ILE 4700.0091
LYS 2030.0147
SER 2040.0098
PRO 2050.0056
PRO 2060.0061
ILE 2070.0080
LEU 2080.0090
PRO 2090.0094
PRO 2100.0093
HIS 2110.0092
LEU 2120.0074
LEU 2130.0076
GLN 2140.0070
VAL 2150.0024
ILE 2160.0046
LEU 2170.0075
ASN 2180.0118
LYS 2190.0102
ASP 2200.0139
THR 2210.0140
ASN 2220.0120
ILE 2230.0087
SER 2240.0115
CYS 2250.0124
ASP 2260.0098
PRO 2270.0058
ALA 2280.0034
LEU 2290.0094
LEU 2300.0075
PRO 2310.0073
GLU 2320.0094
PRO 2330.0124
ASN 2340.0101
HIS 2350.0061
VAL 2360.0081
MET 2370.0065
LEU 2380.0053
ASN 2390.0044
HIS 2400.0057
LEU 2410.0060
TYR 2420.0035
ALA 2430.0080
LEU 2440.0136
SER 2450.0160
ILE 2460.0165
LYS 2470.0254
ASP 2480.0249
SER 2490.0145
VAL 2500.0171
MET 2510.0088
VAL 2520.0093
LEU 2530.0119
SER 2540.0074
ALA 2550.0042
THR 2560.0036
HIS 2570.0099
ARG 2580.0154
TYR 2590.0397
LYS 2600.0287
LYS 2610.0093
LYS 2620.0338
TYR 2630.0167
VAL 2640.0154
THR 2650.0098
THR 2660.0059
LEU 2670.0092
LEU 2680.0114
TYR 2690.0106
LYS 2700.0052
PRO 2710.0077
PRO 5280.0237
GLY 5290.0079
SER 5300.0103
HIS 5310.0081
THR 5320.0074
ILE 5330.0100
GLU 5340.0109
PHE 5350.0084
PHE 5360.0109
GLU 5370.0137
MET 5380.0137
CYS 5390.0137
ALA 5400.0200
ASN 5410.0193
LEU 5420.0157
ILE 5430.0185
LYS 5440.0218
ILE 5450.0104
LEU 5460.0193
ALA 5470.0476
GLN 5480.0611

If you find results from this site helpful for your research, please cite one of our papers:

elNémo is maintained by Yves-Henri Sanejouand.
It was developed by Karsten Suhre.
Between 2003 and 2014, it was hosted by IGS (Marseille).
Between 2015 and 2025, it was hosted by US2B (Nantes).
Last modification: april 24th, 2026.