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***  Apo AMPK  ***

<R2> analysis for 260711175133601569

---  normal mode 85  ---

This page gives a visualization of the normalized mean square displacement <R2> of all C-alpha atoms in the protein that are associated to this mode (black bars). The three components of the corresponding eigenvector are shown on the left (colored bars). Here is the raw data for <R2> and for the eigenvector (shift-click on the links for download).

XYZresidue<R2><R2>max = 0.0765
ARG 100.0222
VAL 110.0199
LYS 120.0133
ILE 130.0107
GLY 140.0043
HIS 150.0047
TYR 160.0095
ILE 170.0113
LEU 180.0144
GLY 190.0265
ASP 200.0236
THR 210.0161
LEU 220.0202
GLY 230.0420
VAL 240.0765
GLY 250.0382
THR 260.0307
PHE 270.0233
GLY 280.0296
LYS 290.0260
VAL 300.0160
LYS 310.0028
VAL 320.0133
GLY 330.0172
LYS 340.0194
HIS 350.0051
GLU 360.0174
LEU 370.0328
THR 380.0157
GLY 390.0186
HIS 400.0187
LYS 410.0199
VAL 420.0181
ALA 430.0128
VAL 440.0099
LYS 450.0101
ILE 460.0064
LEU 470.0071
ASN 480.0050
ARG 490.0104
GLN 500.0124
LYS 510.0081
ILE 520.0045
ARG 530.0088
SER 540.0108
LEU 550.0162
ASP 560.0207
VAL 570.0174
VAL 580.0098
GLY 590.0112
LYS 600.0109
ILE 610.0082
ARG 620.0132
ARG 630.0096
GLU 640.0061
ILE 650.0090
GLN 660.0110
ASN 670.0076
LEU 680.0098
LYS 690.0146
LEU 700.0149
PHE 710.0134
ARG 720.0172
HIS 730.0115
PRO 740.0116
HIS 750.0088
ILE 760.0088
ILE 770.0081
LYS 780.0108
LEU 790.0120
TYR 800.0149
GLN 810.0167
VAL 820.0134
ILE 830.0089
SER 840.0059
THR 850.0217
PRO 860.0341
SER 870.0218
ASP 880.0060
ILE 890.0051
PHE 900.0098
MET 910.0109
VAL 920.0120
MET 930.0121
GLU 940.0141
TYR 950.0127
VAL 960.0095
SER 970.0109
GLY 980.0109
GLY 990.0150
GLU 1000.0129
LEU 1010.0130
PHE 1020.0170
ASP 1030.0174
TYR 1040.0147
ILE 1050.0186
CYS 1060.0424
LYS 1070.0412
ASN 1080.0322
GLY 1090.0167
ARG 1100.0134
LEU 1110.0117
ASP 1120.0092
GLU 1130.0068
LYS 1140.0084
GLU 1150.0072
SER 1160.0068
ARG 1170.0061
ARG 1180.0073
LEU 1190.0061
PHE 1200.0061
GLN 1210.0078
GLN 1220.0075
ILE 1230.0070
LEU 1240.0071
SER 1250.0073
GLY 1260.0066
VAL 1270.0035
ASP 1280.0070
TYR 1290.0069
CYS 1300.0027
HIS 1310.0025
ARG 1320.0040
HIS 1330.0039
MET 1340.0023
VAL 1350.0026
VAL 1360.0034
HIS 1370.0040
ARG 1380.0044
ASP 1390.0067
LEU 1400.0074
LYS 1410.0097
PRO 1420.0128
GLU 1430.0121
ASN 1440.0082
VAL 1450.0062
LEU 1460.0054
LEU 1470.0051
ASP 1480.0044
ALA 1490.0143
HIS 1500.0219
MET 1510.0102
ASN 1520.0091
ALA 1530.0074
LYS 1540.0059
ILE 1550.0042
ALA 1560.0017
ASP 1570.0069
PHE 1580.0065
GLY 1590.0064
LEU 1600.0048
SER 1610.0025
ASN 1620.0020
MET 1630.0046
MET 1640.0052
SER 1650.0074
ASP 1660.0086
GLY 1670.0079
GLU 1680.0072
PHE 1690.0061
LEU 1700.0053
ARG 1710.0072
SER 1730.0057
CYS 1740.0066
GLY 1750.0069
SER 1760.0069
PRO 1770.0058
ASN 1780.0081
TYR 1790.0073
ALA 1800.0075
ALA 1810.0091
PRO 1820.0098
GLU 1830.0097
VAL 1840.0074
ILE 1850.0078
SER 1860.0112
GLY 1870.0136
ARG 1880.0158
LEU 1890.0117
TYR 1900.0101
ALA 1910.0073
GLY 1920.0057
PRO 1930.0056
GLU 1940.0084
VAL 1950.0059
ASP 1960.0064
ILE 1970.0078
TRP 1980.0075
SER 1990.0074
SER 2000.0075
GLY 2010.0073
VAL 2020.0070
ILE 2030.0093
LEU 2040.0073
TYR 2050.0072
ALA 2060.0098
LEU 2070.0084
LEU 2080.0081
CYS 2090.0111
GLY 2100.0082
THR 2110.0088
LEU 2120.0066
PRO 2130.0063
PHE 2140.0056
ASP 2150.0072
ASP 2160.0049
ASP 2170.0113
HIS 2180.0064
VAL 2190.0100
PRO 2200.0126
THR 2210.0088
LEU 2220.0084
PHE 2230.0104
LYS 2240.0107
LYS 2250.0094
ILE 2260.0105
CYS 2270.0116
ASP 2280.0117
GLY 2290.0119
ILE 2300.0118
PHE 2310.0073
TYR 2320.0159
THR 2330.0089
PRO 2340.0377
GLN 2350.0572
TYR 2360.0107
LEU 2370.0066
ASN 2380.0079
PRO 2390.0073
SER 2400.0067
VAL 2410.0031
ILE 2420.0052
SER 2430.0069
LEU 2440.0047
LEU 2450.0054
LYS 2460.0061
HIS 2470.0070
MET 2480.0079
LEU 2490.0074
GLN 2500.0081
VAL 2510.0101
ASP 2520.0117
PRO 2530.0121
MET 2540.0126
LYS 2550.0108
ARG 2560.0093
ALA 2570.0037
THR 2580.0034
ILE 2590.0049
LYS 2600.0047
ASP 2610.0040
ILE 2620.0039
ARG 2630.0052
GLU 2640.0053
HIS 2650.0047
GLU 2660.0071
TRP 2670.0054
PHE 2680.0051
LYS 2690.0090
GLN 2700.0083
ASP 2710.0082
LEU 2720.0152
PRO 2730.0138
LYS 2740.0151
TYR 2750.0085
LEU 2760.0089
PHE 2770.0091
PRO 2780.0200
GLU 2790.0220
ASP 2800.0226
ALA 3210.0118
VAL 3220.0094
ALA 3230.0053
TYR 3240.0032
HIS 3250.0113
LEU 3260.0126
ILE 3270.0040
ILE 3280.0038
ASP 3290.0040
ASN 3300.0112
ARG 3310.0077
ARG 3320.0099
ILE 3330.0171
MET 3340.0099
ASN 3350.0134
GLU 3360.0140
ALA 3370.0093
LYS 3380.0107
ASP 3390.0066
PHE 3400.0228
TYR 3410.0311
LEU 3420.0155
ALA 3430.0093
THR 3440.0126
SER 3450.0207
PRO 3460.0108
PRO 3470.0126
ASP 3480.0178
SER 3490.0176
PHE 3500.0189
LEU 3510.0176
ASP 3520.0098
ASP 3530.0038
HIS 3540.0042
HIS 3550.0070
LEU 3560.0063
THR 3570.0080
ARG 3580.0060
PRO 3590.0076
HIS 3600.0061
PRO 3610.0098
GLU 3620.0084
ARG 3630.0067
VAL 3640.0139
PRO 3650.0181
PHE 3660.0172
LEU 3670.0197
VAL 3680.0270
ALA 3690.0121
GLU 3700.0212
THR 3710.0346
PRO 3720.0115
ARG 3730.0080
ALA 3740.0438
ALA 3940.0116
LYS 3950.0080
TRP 3960.0088
HIS 3970.0069
LEU 3980.0062
GLY 3990.0085
ILE 4000.0158
ARG 4010.0162
SER 4020.0171
GLN 4030.0257
SER 4040.0214
ARG 4050.0135
PRO 4060.0078
ASN 4070.0084
ASP 4080.0042
ILE 4090.0122
MET 4100.0109
ALA 4110.0088
GLU 4120.0258
VAL 4130.0198
CYS 4140.0183
ARG 4150.0275
ALA 4160.0191
ILE 4170.0173
LYS 4180.0313
GLN 4190.0290
LEU 4200.0248
ASP 4210.0276
TYR 4220.0155
GLU 4230.0118
TRP 4240.0110
LYS 4250.0134
VAL 4260.0209
VAL 4270.0145
ASN 4280.0159
PRO 4290.0180
TYR 4300.0143
TYR 4310.0132
LEU 4320.0132
ARG 4330.0088
VAL 4340.0075
ARG 4350.0050
ARG 4360.0066
LYS 4370.0029
ASN 4380.0037
PRO 4390.0093
VAL 4400.0136
THR 4410.0133
SER 4420.0064
THR 4430.0058
PHE 4440.0046
SER 4450.0020
LYS 4460.0017
MET 4470.0019
SER 4480.0076
LEU 4490.0091
GLN 4500.0117
LEU 4510.0152
TYR 4520.0157
GLN 4530.0156
VAL 4540.0188
ASP 4550.0156
SER 4560.0135
ARG 4570.0180
THR 4580.0191
TYR 4590.0173
LEU 4600.0110
LEU 4610.0105
ASP 4620.0101
PHE 4630.0034
ARG 4640.0025
SER 4650.0022
ILE 4660.0029
ASP 4670.0030
ASP 4680.0025
GLU 4690.0418
ILE 4700.0036
LYS 2030.0283
SER 2040.0220
PRO 2050.0192
PRO 2060.0203
ILE 2070.0205
LEU 2080.0198
PRO 2090.0121
PRO 2100.0152
HIS 2110.0125
LEU 2120.0093
LEU 2130.0127
GLN 2140.0130
VAL 2150.0023
ILE 2160.0012
LEU 2170.0050
ASN 2180.0064
LYS 2190.0078
ASP 2200.0144
THR 2210.0123
ASN 2220.0099
ILE 2230.0058
SER 2240.0054
CYS 2250.0041
ASP 2260.0023
PRO 2270.0069
ALA 2280.0056
LEU 2290.0046
LEU 2300.0051
PRO 2310.0086
GLU 2320.0093
PRO 2330.0060
ASN 2340.0079
HIS 2350.0083
VAL 2360.0082
MET 2370.0080
LEU 2380.0078
ASN 2390.0041
HIS 2400.0051
LEU 2410.0052
TYR 2420.0098
ALA 2430.0121
LEU 2440.0131
SER 2450.0259
ILE 2460.0193
LYS 2470.0295
ASP 2480.0218
SER 2490.0150
VAL 2500.0283
MET 2510.0174
VAL 2520.0144
LEU 2530.0140
SER 2540.0091
ALA 2550.0085
THR 2560.0072
HIS 2570.0086
ARG 2580.0096
TYR 2590.0211
LYS 2600.0198
LYS 2610.0124
LYS 2620.0196
TYR 2630.0092
VAL 2640.0088
THR 2650.0081
THR 2660.0076
LEU 2670.0099
LEU 2680.0113
TYR 2690.0157
LYS 2700.0164
PRO 2710.0178
PRO 5280.0139
GLY 5290.0088
SER 5300.0124
HIS 5310.0068
THR 5320.0078
ILE 5330.0070
GLU 5340.0042
PHE 5350.0056
PHE 5360.0063
GLU 5370.0047
MET 5380.0037
CYS 5390.0037
ALA 5400.0101
ASN 5410.0079
LEU 5420.0044
ILE 5430.0142
LYS 5440.0187
ILE 5450.0086
LEU 5460.0225
ALA 5470.0431
GLN 5480.0560

If you find results from this site helpful for your research, please cite one of our papers:

elNémo is maintained by Yves-Henri Sanejouand.
It was developed by Karsten Suhre.
Between 2003 and 2014, it was hosted by IGS (Marseille).
Between 2015 and 2025, it was hosted by US2B (Nantes).
Last modification: april 24th, 2026.