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***  Apo AMPK  ***

<R2> analysis for 260711175133601569

---  normal mode 86  ---

This page gives a visualization of the normalized mean square displacement <R2> of all C-alpha atoms in the protein that are associated to this mode (black bars). The three components of the corresponding eigenvector are shown on the left (colored bars). Here is the raw data for <R2> and for the eigenvector (shift-click on the links for download).

XYZresidue<R2><R2>max = 0.1291
ARG 100.0067
VAL 110.0072
LYS 120.0065
ILE 130.0052
GLY 140.0045
HIS 150.0039
TYR 160.0041
ILE 170.0041
LEU 180.0035
GLY 190.0112
ASP 200.0094
THR 210.0109
LEU 220.0129
GLY 230.0223
VAL 240.0396
GLY 250.0186
THR 260.0143
PHE 270.0099
GLY 280.0147
LYS 290.0144
VAL 300.0094
LYS 310.0020
VAL 320.0033
GLY 330.0048
LYS 340.0060
HIS 350.0035
GLU 360.0075
LEU 370.0120
THR 380.0084
GLY 390.0066
HIS 400.0035
LYS 410.0049
VAL 420.0053
ALA 430.0056
VAL 440.0038
LYS 450.0040
ILE 460.0032
LEU 470.0029
ASN 480.0024
ARG 490.0038
GLN 500.0065
LYS 510.0042
ILE 520.0007
ARG 530.0037
SER 540.0048
LEU 550.0058
ASP 560.0060
VAL 570.0043
VAL 580.0021
GLY 590.0032
LYS 600.0042
ILE 610.0036
ARG 620.0037
ARG 630.0037
GLU 640.0030
ILE 650.0032
GLN 660.0027
ASN 670.0034
LEU 680.0043
LYS 690.0056
LEU 700.0076
PHE 710.0066
ARG 720.0086
HIS 730.0045
PRO 740.0041
HIS 750.0029
ILE 760.0049
ILE 770.0059
LYS 780.0063
LEU 790.0042
TYR 800.0041
GLN 810.0039
VAL 820.0040
ILE 830.0032
SER 840.0029
THR 850.0075
PRO 860.0106
SER 870.0060
ASP 880.0019
ILE 890.0022
PHE 900.0039
MET 910.0036
VAL 920.0037
MET 930.0043
GLU 940.0072
TYR 950.0073
VAL 960.0097
SER 970.0104
GLY 980.0053
GLY 990.0134
GLU 1000.0116
LEU 1010.0082
PHE 1020.0120
ASP 1030.0153
TYR 1040.0112
ILE 1050.0127
CYS 1060.0315
LYS 1070.0312
ASN 1080.0208
GLY 1090.0138
ARG 1100.0101
LEU 1110.0082
ASP 1120.0113
GLU 1130.0083
LYS 1140.0094
GLU 1150.0088
SER 1160.0081
ARG 1170.0062
ARG 1180.0084
LEU 1190.0068
PHE 1200.0062
GLN 1210.0048
GLN 1220.0043
ILE 1230.0039
LEU 1240.0038
SER 1250.0035
GLY 1260.0043
VAL 1270.0022
ASP 1280.0044
TYR 1290.0047
CYS 1300.0028
HIS 1310.0037
ARG 1320.0060
HIS 1330.0047
MET 1340.0040
VAL 1350.0027
VAL 1360.0026
HIS 1370.0034
ARG 1380.0039
ASP 1390.0043
LEU 1400.0036
LYS 1410.0050
PRO 1420.0069
GLU 1430.0092
ASN 1440.0074
VAL 1450.0070
LEU 1460.0068
LEU 1470.0052
ASP 1480.0130
ALA 1490.0385
HIS 1500.0469
MET 1510.0170
ASN 1520.0091
ALA 1530.0047
LYS 1540.0034
ILE 1550.0043
ALA 1560.0069
ASP 1570.0058
PHE 1580.0042
GLY 1590.0051
LEU 1600.0047
SER 1610.0035
ASN 1620.0027
MET 1630.0030
MET 1640.0030
SER 1650.0036
ASP 1660.0026
GLY 1670.0020
GLU 1680.0025
PHE 1690.0015
LEU 1700.0018
ARG 1710.0037
SER 1730.0043
CYS 1740.0038
GLY 1750.0054
SER 1760.0064
PRO 1770.0066
ASN 1780.0070
TYR 1790.0064
ALA 1800.0062
ALA 1810.0067
PRO 1820.0072
GLU 1830.0063
VAL 1840.0057
ILE 1850.0065
SER 1860.0076
GLY 1870.0052
ARG 1880.0063
LEU 1890.0040
TYR 1900.0035
ALA 1910.0017
GLY 1920.0018
PRO 1930.0021
GLU 1940.0041
VAL 1950.0035
ASP 1960.0038
ILE 1970.0036
TRP 1980.0044
SER 1990.0046
SER 2000.0032
GLY 2010.0032
VAL 2020.0035
ILE 2030.0047
LEU 2040.0039
TYR 2050.0042
ALA 2060.0051
LEU 2070.0045
LEU 2080.0059
CYS 2090.0079
GLY 2100.0046
THR 2110.0059
LEU 2120.0053
PRO 2130.0055
PHE 2140.0039
ASP 2150.0048
ASP 2160.0015
ASP 2170.0042
HIS 2180.0042
VAL 2190.0043
PRO 2200.0098
THR 2210.0052
LEU 2220.0046
PHE 2230.0083
LYS 2240.0065
LYS 2250.0054
ILE 2260.0075
CYS 2270.0071
ASP 2280.0063
GLY 2290.0061
ILE 2300.0061
PHE 2310.0057
TYR 2320.0106
THR 2330.0044
PRO 2340.0176
GLN 2350.0244
TYR 2360.0047
LEU 2370.0034
ASN 2380.0019
PRO 2390.0040
SER 2400.0031
VAL 2410.0033
ILE 2420.0040
SER 2430.0033
LEU 2440.0027
LEU 2450.0016
LYS 2460.0016
HIS 2470.0017
MET 2480.0029
LEU 2490.0029
GLN 2500.0029
VAL 2510.0047
ASP 2520.0048
PRO 2530.0052
MET 2540.0050
LYS 2550.0036
ARG 2560.0035
ALA 2570.0015
THR 2580.0012
ILE 2590.0018
LYS 2600.0026
ASP 2610.0029
ILE 2620.0033
ARG 2630.0031
GLU 2640.0031
HIS 2650.0039
GLU 2660.0032
TRP 2670.0029
PHE 2680.0027
LYS 2690.0012
GLN 2700.0013
ASP 2710.0041
LEU 2720.0047
PRO 2730.0081
LYS 2740.0124
TYR 2750.0111
LEU 2760.0070
PHE 2770.0078
PRO 2780.0152
GLU 2790.0122
ASP 2800.0264
ALA 3210.0332
VAL 3220.0258
ALA 3230.0311
TYR 3240.0253
HIS 3250.0331
LEU 3260.0233
ILE 3270.0064
ILE 3280.0217
ASP 3290.0153
ASN 3300.0289
ARG 3310.0397
ARG 3320.0320
ILE 3330.0336
MET 3340.0212
ASN 3350.0201
GLU 3360.0219
ALA 3370.0141
LYS 3380.0239
ASP 3390.0255
PHE 3400.0246
TYR 3410.0277
LEU 3420.0229
ALA 3430.0110
THR 3440.0079
SER 3450.0135
PRO 3460.0272
PRO 3470.0427
ASP 3480.0346
SER 3490.0260
PHE 3500.0141
LEU 3510.0366
ASP 3520.0241
ASP 3530.0464
HIS 3540.0361
HIS 3550.0315
LEU 3560.0350
THR 3570.0224
ARG 3580.0153
PRO 3590.0114
HIS 3600.0087
PRO 3610.0079
GLU 3620.0070
ARG 3630.0105
VAL 3640.0251
PRO 3650.0263
PHE 3660.0152
LEU 3670.0513
VAL 3680.0539
ALA 3690.0477
GLU 3700.0901
THR 3710.0860
PRO 3720.0279
ARG 3730.0258
ALA 3740.1291
ALA 3940.0141
LYS 3950.0112
TRP 3960.0069
HIS 3970.0056
LEU 3980.0033
GLY 3990.0041
ILE 4000.0034
ARG 4010.0023
SER 4020.0021
GLN 4030.0025
SER 4040.0024
ARG 4050.0032
PRO 4060.0019
ASN 4070.0032
ASP 4080.0033
ILE 4090.0027
MET 4100.0031
ALA 4110.0054
GLU 4120.0053
VAL 4130.0045
CYS 4140.0063
ARG 4150.0081
ALA 4160.0068
ILE 4170.0059
LYS 4180.0091
GLN 4190.0105
LEU 4200.0091
ASP 4210.0077
TYR 4220.0038
GLU 4230.0017
TRP 4240.0022
LYS 4250.0040
VAL 4260.0062
VAL 4270.0038
ASN 4280.0027
PRO 4290.0045
TYR 4300.0028
TYR 4310.0022
LEU 4320.0026
ARG 4330.0018
VAL 4340.0012
ARG 4350.0026
ARG 4360.0051
LYS 4370.0037
ASN 4380.0021
PRO 4390.0064
VAL 4400.0082
THR 4410.0062
SER 4420.0022
THR 4430.0020
PHE 4440.0038
SER 4450.0030
LYS 4460.0023
MET 4470.0014
SER 4480.0016
LEU 4490.0016
GLN 4500.0016
LEU 4510.0026
TYR 4520.0024
GLN 4530.0031
VAL 4540.0029
ASP 4550.0044
SER 4560.0057
ARG 4570.0015
THR 4580.0011
TYR 4590.0011
LEU 4600.0010
LEU 4610.0016
ASP 4620.0013
PHE 4630.0014
ARG 4640.0009
SER 4650.0006
ILE 4660.0020
ASP 4670.0027
ASP 4680.0031
GLU 4690.0035
ILE 4700.0026
LYS 2030.0133
SER 2040.0078
PRO 2050.0052
PRO 2060.0052
ILE 2070.0048
LEU 2080.0033
PRO 2090.0031
PRO 2100.0040
HIS 2110.0037
LEU 2120.0030
LEU 2130.0032
GLN 2140.0043
VAL 2150.0053
ILE 2160.0036
LEU 2170.0037
ASN 2180.0072
LYS 2190.0123
ASP 2200.0201
THR 2210.0150
ASN 2220.0113
ILE 2230.0142
SER 2240.0129
CYS 2250.0163
ASP 2260.0206
PRO 2270.0197
ALA 2280.0245
LEU 2290.0137
LEU 2300.0082
PRO 2310.0090
GLU 2320.0153
PRO 2330.0076
ASN 2340.0054
HIS 2350.0026
VAL 2360.0021
MET 2370.0022
LEU 2380.0025
ASN 2390.0013
HIS 2400.0013
LEU 2410.0018
TYR 2420.0035
ALA 2430.0048
LEU 2440.0069
SER 2450.0094
ILE 2460.0084
LYS 2470.0046
ASP 2480.0081
SER 2490.0089
VAL 2500.0077
MET 2510.0058
VAL 2520.0057
LEU 2530.0045
SER 2540.0025
ALA 2550.0028
THR 2560.0041
HIS 2570.0045
ARG 2580.0057
TYR 2590.0145
LYS 2600.0126
LYS 2610.0049
LYS 2620.0084
TYR 2630.0084
VAL 2640.0087
THR 2650.0067
THR 2660.0053
LEU 2670.0056
LEU 2680.0057
TYR 2690.0074
LYS 2700.0068
PRO 2710.0077
PRO 5280.0036
GLY 5290.0019
SER 5300.0007
HIS 5310.0007
THR 5320.0016
ILE 5330.0019
GLU 5340.0005
PHE 5350.0005
PHE 5360.0015
GLU 5370.0010
MET 5380.0004
CYS 5390.0006
ALA 5400.0017
ASN 5410.0021
LEU 5420.0020
ILE 5430.0009
LYS 5440.0036
ILE 5450.0036
LEU 5460.0010
ALA 5470.0046
GLN 5480.0100

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elNémo is maintained by Yves-Henri Sanejouand.
It was developed by Karsten Suhre.
Between 2003 and 2014, it was hosted by IGS (Marseille).
Between 2015 and 2025, it was hosted by US2B (Nantes).
Last modification: april 24th, 2026.