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***  Apo AMPK  ***

<R2> analysis for 260711175133601569

---  normal mode 87  ---

This page gives a visualization of the normalized mean square displacement <R2> of all C-alpha atoms in the protein that are associated to this mode (black bars). The three components of the corresponding eigenvector are shown on the left (colored bars). Here is the raw data for <R2> and for the eigenvector (shift-click on the links for download).

XYZresidue<R2><R2>max = 0.0763
ARG 100.0452
VAL 110.0434
LYS 120.0365
ILE 130.0254
GLY 140.0375
HIS 150.0276
TYR 160.0170
ILE 170.0212
LEU 180.0181
GLY 190.0387
ASP 200.0763
THR 210.0620
LEU 220.0502
GLY 230.0221
VAL 240.0077
GLY 250.0183
THR 260.0276
PHE 270.0280
GLY 280.0352
LYS 290.0180
VAL 300.0022
LYS 310.0165
VAL 320.0241
GLY 330.0117
LYS 340.0105
HIS 350.0024
GLU 360.0228
LEU 370.0283
THR 380.0425
GLY 390.0321
HIS 400.0106
LYS 410.0067
VAL 420.0151
ALA 430.0090
VAL 440.0038
LYS 450.0105
ILE 460.0233
LEU 470.0219
ASN 480.0226
ARG 490.0294
GLN 500.0396
LYS 510.0240
ILE 520.0113
ARG 530.0231
SER 540.0278
LEU 550.0337
ASP 560.0419
VAL 570.0279
VAL 580.0062
GLY 590.0162
LYS 600.0207
ILE 610.0163
ARG 620.0251
ARG 630.0234
GLU 640.0142
ILE 650.0192
GLN 660.0229
ASN 670.0142
LEU 680.0151
LYS 690.0213
LEU 700.0219
PHE 710.0147
ARG 720.0164
HIS 730.0089
PRO 740.0108
HIS 750.0109
ILE 760.0103
ILE 770.0104
LYS 780.0104
LEU 790.0133
TYR 800.0097
GLN 810.0128
VAL 820.0183
ILE 830.0164
SER 840.0197
THR 850.0330
PRO 860.0437
SER 870.0272
ASP 880.0192
ILE 890.0193
PHE 900.0173
MET 910.0127
VAL 920.0073
MET 930.0072
GLU 940.0059
TYR 950.0126
VAL 960.0156
SER 970.0209
GLY 980.0163
GLY 990.0089
GLU 1000.0097
LEU 1010.0117
PHE 1020.0089
ASP 1030.0074
TYR 1040.0108
ILE 1050.0044
CYS 1060.0181
LYS 1070.0245
ASN 1080.0195
GLY 1090.0068
ARG 1100.0061
LEU 1110.0077
ASP 1120.0077
GLU 1130.0074
LYS 1140.0057
GLU 1150.0067
SER 1160.0098
ARG 1170.0087
ARG 1180.0104
LEU 1190.0104
PHE 1200.0103
GLN 1210.0065
GLN 1220.0072
ILE 1230.0094
LEU 1240.0067
SER 1250.0044
GLY 1260.0071
VAL 1270.0060
ASP 1280.0044
TYR 1290.0063
CYS 1300.0087
HIS 1310.0073
ARG 1320.0095
HIS 1330.0110
MET 1340.0104
VAL 1350.0102
VAL 1360.0087
HIS 1370.0103
ARG 1380.0119
ASP 1390.0114
LEU 1400.0116
LYS 1410.0123
PRO 1420.0112
GLU 1430.0095
ASN 1440.0101
VAL 1450.0090
LEU 1460.0089
LEU 1470.0133
ASP 1480.0176
ALA 1490.0288
HIS 1500.0340
MET 1510.0183
ASN 1520.0166
ALA 1530.0136
LYS 1540.0108
ILE 1550.0095
ALA 1560.0087
ASP 1570.0138
PHE 1580.0124
GLY 1590.0124
LEU 1600.0125
SER 1610.0110
ASN 1620.0103
MET 1630.0082
MET 1640.0084
SER 1650.0081
ASP 1660.0068
GLY 1670.0065
GLU 1680.0068
PHE 1690.0035
LEU 1700.0051
ARG 1710.0051
SER 1730.0106
CYS 1740.0130
GLY 1750.0124
SER 1760.0147
PRO 1770.0144
ASN 1780.0136
TYR 1790.0101
ALA 1800.0100
ALA 1810.0089
PRO 1820.0062
GLU 1830.0062
VAL 1840.0071
ILE 1850.0086
SER 1860.0078
GLY 1870.0080
ARG 1880.0038
LEU 1890.0032
TYR 1900.0024
ALA 1910.0044
GLY 1920.0043
PRO 1930.0040
GLU 1940.0025
VAL 1950.0046
ASP 1960.0058
ILE 1970.0041
TRP 1980.0051
SER 1990.0074
SER 2000.0069
GLY 2010.0057
VAL 2020.0068
ILE 2030.0090
LEU 2040.0072
TYR 2050.0064
ALA 2060.0084
LEU 2070.0077
LEU 2080.0066
CYS 2090.0076
GLY 2100.0081
THR 2110.0098
LEU 2120.0117
PRO 2130.0113
PHE 2140.0107
ASP 2150.0137
ASP 2160.0074
ASP 2170.0222
HIS 2180.0149
VAL 2190.0185
PRO 2200.0230
THR 2210.0142
LEU 2220.0149
PHE 2230.0177
LYS 2240.0148
LYS 2250.0140
ILE 2260.0140
CYS 2270.0071
ASP 2280.0081
GLY 2290.0106
ILE 2300.0188
PHE 2310.0189
TYR 2320.0259
THR 2330.0101
PRO 2340.0159
GLN 2350.0182
TYR 2360.0146
LEU 2370.0127
ASN 2380.0121
PRO 2390.0147
SER 2400.0148
VAL 2410.0135
ILE 2420.0117
SER 2430.0118
LEU 2440.0128
LEU 2450.0082
LYS 2460.0070
HIS 2470.0091
MET 2480.0051
LEU 2490.0049
GLN 2500.0062
VAL 2510.0038
ASP 2520.0078
PRO 2530.0067
MET 2540.0087
LYS 2550.0096
ARG 2560.0066
ALA 2570.0120
THR 2580.0129
ILE 2590.0095
LYS 2600.0191
ASP 2610.0198
ILE 2620.0149
ARG 2630.0131
GLU 2640.0243
HIS 2650.0238
GLU 2660.0299
TRP 2670.0199
PHE 2680.0142
LYS 2690.0230
GLN 2700.0215
ASP 2710.0224
LEU 2720.0150
PRO 2730.0079
LYS 2740.0058
TYR 2750.0029
LEU 2760.0017
PHE 2770.0032
PRO 2780.0072
GLU 2790.0162
ASP 2800.0281
ALA 3210.0085
VAL 3220.0062
ALA 3230.0113
TYR 3240.0172
HIS 3250.0171
LEU 3260.0125
ILE 3270.0076
ILE 3280.0126
ASP 3290.0086
ASN 3300.0133
ARG 3310.0143
ARG 3320.0124
ILE 3330.0146
MET 3340.0157
ASN 3350.0133
GLU 3360.0059
ALA 3370.0070
LYS 3380.0086
ASP 3390.0092
PHE 3400.0123
TYR 3410.0156
LEU 3420.0083
ALA 3430.0083
THR 3440.0103
SER 3450.0120
PRO 3460.0032
PRO 3470.0121
ASP 3480.0116
SER 3490.0061
PHE 3500.0141
LEU 3510.0080
ASP 3520.0070
ASP 3530.0127
HIS 3540.0118
HIS 3550.0110
LEU 3560.0082
THR 3570.0072
ARG 3580.0068
PRO 3590.0051
HIS 3600.0035
PRO 3610.0034
GLU 3620.0032
ARG 3630.0051
VAL 3640.0058
PRO 3650.0114
PHE 3660.0111
LEU 3670.0054
VAL 3680.0050
ALA 3690.0131
GLU 3700.0183
THR 3710.0134
PRO 3720.0154
ARG 3730.0071
ALA 3740.0147
ALA 3940.0098
LYS 3950.0095
TRP 3960.0093
HIS 3970.0063
LEU 3980.0057
GLY 3990.0043
ILE 4000.0037
ARG 4010.0042
SER 4020.0045
GLN 4030.0072
SER 4040.0141
ARG 4050.0117
PRO 4060.0066
ASN 4070.0111
ASP 4080.0159
ILE 4090.0122
MET 4100.0110
ALA 4110.0126
GLU 4120.0136
VAL 4130.0117
CYS 4140.0044
ARG 4150.0044
ALA 4160.0067
ILE 4170.0071
LYS 4180.0060
GLN 4190.0062
LEU 4200.0115
ASP 4210.0130
TYR 4220.0114
GLU 4230.0103
TRP 4240.0091
LYS 4250.0081
VAL 4260.0059
VAL 4270.0079
ASN 4280.0099
PRO 4290.0115
TYR 4300.0064
TYR 4310.0062
LEU 4320.0066
ARG 4330.0078
VAL 4340.0084
ARG 4350.0096
ARG 4360.0104
LYS 4370.0076
ASN 4380.0044
PRO 4390.0052
VAL 4400.0049
THR 4410.0048
SER 4420.0026
THR 4430.0039
PHE 4440.0082
SER 4450.0077
LYS 4460.0077
MET 4470.0073
SER 4480.0048
LEU 4490.0037
GLN 4500.0033
LEU 4510.0041
TYR 4520.0037
GLN 4530.0035
VAL 4540.0056
ASP 4550.0077
SER 4560.0093
ARG 4570.0065
THR 4580.0063
TYR 4590.0045
LEU 4600.0022
LEU 4610.0018
ASP 4620.0016
PHE 4630.0032
ARG 4640.0038
SER 4650.0045
ILE 4660.0078
ASP 4670.0092
ASP 4680.0089
GLU 4690.0102
ILE 4700.0015
LYS 2030.0119
SER 2040.0074
PRO 2050.0048
PRO 2060.0034
ILE 2070.0029
LEU 2080.0035
PRO 2090.0052
PRO 2100.0056
HIS 2110.0052
LEU 2120.0058
LEU 2130.0063
GLN 2140.0053
VAL 2150.0076
ILE 2160.0056
LEU 2170.0060
ASN 2180.0070
LYS 2190.0042
ASP 2200.0056
THR 2210.0095
ASN 2220.0086
ILE 2230.0077
SER 2240.0082
CYS 2250.0092
ASP 2260.0082
PRO 2270.0072
ALA 2280.0074
LEU 2290.0088
LEU 2300.0035
PRO 2310.0042
GLU 2320.0021
PRO 2330.0070
ASN 2340.0060
HIS 2350.0065
VAL 2360.0066
MET 2370.0073
LEU 2380.0084
ASN 2390.0071
HIS 2400.0064
LEU 2410.0058
TYR 2420.0081
ALA 2430.0082
LEU 2440.0082
SER 2450.0145
ILE 2460.0103
LYS 2470.0167
ASP 2480.0145
SER 2490.0135
VAL 2500.0125
MET 2510.0055
VAL 2520.0062
LEU 2530.0069
SER 2540.0095
ALA 2550.0103
THR 2560.0108
HIS 2570.0119
ARG 2580.0121
TYR 2590.0153
LYS 2600.0163
LYS 2610.0152
LYS 2620.0173
TYR 2630.0112
VAL 2640.0124
THR 2650.0121
THR 2660.0109
LEU 2670.0090
LEU 2680.0075
TYR 2690.0095
LYS 2700.0091
PRO 2710.0137
PRO 5280.0101
GLY 5290.0096
SER 5300.0108
HIS 5310.0069
THR 5320.0094
ILE 5330.0079
GLU 5340.0053
PHE 5350.0065
PHE 5360.0066
GLU 5370.0039
MET 5380.0053
CYS 5390.0061
ALA 5400.0100
ASN 5410.0106
LEU 5420.0096
ILE 5430.0113
LYS 5440.0147
ILE 5450.0110
LEU 5460.0160
ALA 5470.0332
GLN 5480.0412

If you find results from this site helpful for your research, please cite one of our papers:

elNémo is maintained by Yves-Henri Sanejouand.
It was developed by Karsten Suhre.
Between 2003 and 2014, it was hosted by IGS (Marseille).
Between 2015 and 2025, it was hosted by US2B (Nantes).
Last modification: april 24th, 2026.