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***  Apo AMPK  ***

<R2> analysis for 260711175133601569

---  normal mode 88  ---

This page gives a visualization of the normalized mean square displacement <R2> of all C-alpha atoms in the protein that are associated to this mode (black bars). The three components of the corresponding eigenvector are shown on the left (colored bars). Here is the raw data for <R2> and for the eigenvector (shift-click on the links for download).

XYZresidue<R2><R2>max = 0.0744
ARG 100.0056
VAL 110.0047
LYS 120.0031
ILE 130.0020
GLY 140.0012
HIS 150.0025
TYR 160.0026
ILE 170.0030
LEU 180.0035
GLY 190.0049
ASP 200.0027
THR 210.0053
LEU 220.0083
GLY 230.0134
VAL 240.0225
GLY 250.0105
THR 260.0080
PHE 270.0047
GLY 280.0065
LYS 290.0065
VAL 300.0043
LYS 310.0016
VAL 320.0027
GLY 330.0039
LYS 340.0056
HIS 350.0033
GLU 360.0052
LEU 370.0064
THR 380.0041
GLY 390.0068
HIS 400.0054
LYS 410.0053
VAL 420.0046
ALA 430.0029
VAL 440.0024
LYS 450.0023
ILE 460.0006
LEU 470.0014
ASN 480.0012
ARG 490.0018
GLN 500.0016
LYS 510.0021
ILE 520.0027
ARG 530.0027
SER 540.0021
LEU 550.0045
ASP 560.0074
VAL 570.0067
VAL 580.0081
GLY 590.0070
LYS 600.0060
ILE 610.0051
ARG 620.0049
ARG 630.0042
GLU 640.0036
ILE 650.0035
GLN 660.0033
ASN 670.0030
LEU 680.0038
LYS 690.0048
LEU 700.0065
PHE 710.0054
ARG 720.0059
HIS 730.0044
PRO 740.0045
HIS 750.0046
ILE 760.0033
ILE 770.0032
LYS 780.0033
LEU 790.0036
TYR 800.0040
GLN 810.0041
VAL 820.0038
ILE 830.0033
SER 840.0025
THR 850.0012
PRO 860.0026
SER 870.0027
ASP 880.0006
ILE 890.0015
PHE 900.0025
MET 910.0024
VAL 920.0029
MET 930.0029
GLU 940.0031
TYR 950.0031
VAL 960.0021
SER 970.0026
GLY 980.0047
GLY 990.0037
GLU 1000.0063
LEU 1010.0064
PHE 1020.0078
ASP 1030.0082
TYR 1040.0064
ILE 1050.0073
CYS 1060.0078
LYS 1070.0077
ASN 1080.0059
GLY 1090.0035
ARG 1100.0043
LEU 1110.0040
ASP 1120.0046
GLU 1130.0070
LYS 1140.0083
GLU 1150.0062
SER 1160.0063
ARG 1170.0075
ARG 1180.0064
LEU 1190.0062
PHE 1200.0063
GLN 1210.0066
GLN 1220.0060
ILE 1230.0060
LEU 1240.0050
SER 1250.0048
GLY 1260.0050
VAL 1270.0053
ASP 1280.0051
TYR 1290.0058
CYS 1300.0058
HIS 1310.0047
ARG 1320.0055
HIS 1330.0051
MET 1340.0032
VAL 1350.0023
VAL 1360.0040
HIS 1370.0047
ARG 1380.0054
ASP 1390.0055
LEU 1400.0053
LYS 1410.0054
PRO 1420.0068
GLU 1430.0060
ASN 1440.0051
VAL 1450.0033
LEU 1460.0030
LEU 1470.0031
ASP 1480.0033
ALA 1490.0123
HIS 1500.0143
MET 1510.0046
ASN 1520.0024
ALA 1530.0028
LYS 1540.0017
ILE 1550.0021
ALA 1560.0027
ASP 1570.0044
PHE 1580.0033
GLY 1590.0040
LEU 1600.0053
SER 1610.0042
ASN 1620.0036
MET 1630.0004
MET 1640.0017
SER 1650.0053
ASP 1660.0085
GLY 1670.0074
GLU 1680.0066
PHE 1690.0027
LEU 1700.0045
ARG 1710.0080
SER 1730.0087
CYS 1740.0077
GLY 1750.0081
SER 1760.0080
PRO 1770.0075
ASN 1780.0074
TYR 1790.0068
ALA 1800.0068
ALA 1810.0075
PRO 1820.0072
GLU 1830.0074
VAL 1840.0074
ILE 1850.0079
SER 1860.0096
GLY 1870.0086
ARG 1880.0093
LEU 1890.0073
TYR 1900.0077
ALA 1910.0042
GLY 1920.0043
PRO 1930.0042
GLU 1940.0050
VAL 1950.0050
ASP 1960.0050
ILE 1970.0032
TRP 1980.0038
SER 1990.0043
SER 2000.0035
GLY 2010.0031
VAL 2020.0035
ILE 2030.0057
LEU 2040.0043
TYR 2050.0040
ALA 2060.0064
LEU 2070.0053
LEU 2080.0045
CYS 2090.0052
GLY 2100.0055
THR 2110.0066
LEU 2120.0059
PRO 2130.0058
PHE 2140.0049
ASP 2150.0071
ASP 2160.0036
ASP 2170.0083
HIS 2180.0059
VAL 2190.0077
PRO 2200.0104
THR 2210.0066
LEU 2220.0073
PHE 2230.0095
LYS 2240.0080
LYS 2250.0077
ILE 2260.0082
CYS 2270.0054
ASP 2280.0047
GLY 2290.0056
ILE 2300.0089
PHE 2310.0083
TYR 2320.0116
THR 2330.0045
PRO 2340.0074
GLN 2350.0083
TYR 2360.0070
LEU 2370.0068
ASN 2380.0066
PRO 2390.0057
SER 2400.0057
VAL 2410.0058
ILE 2420.0045
SER 2430.0040
LEU 2440.0043
LEU 2450.0033
LYS 2460.0024
HIS 2470.0027
MET 2480.0011
LEU 2490.0010
GLN 2500.0014
VAL 2510.0021
ASP 2520.0031
PRO 2530.0028
MET 2540.0024
LYS 2550.0019
ARG 2560.0006
ALA 2570.0030
THR 2580.0043
ILE 2590.0054
LYS 2600.0085
ASP 2610.0072
ILE 2620.0062
ARG 2630.0074
GLU 2640.0091
HIS 2650.0077
GLU 2660.0082
TRP 2670.0076
PHE 2680.0075
LYS 2690.0101
GLN 2700.0105
ASP 2710.0129
LEU 2720.0118
PRO 2730.0143
LYS 2740.0124
TYR 2750.0096
LEU 2760.0089
PHE 2770.0078
PRO 2780.0354
GLU 2790.0182
ASP 2800.0181
ALA 3210.0280
VAL 3220.0134
ALA 3230.0377
TYR 3240.0549
HIS 3250.0461
LEU 3260.0203
ILE 3270.0218
ILE 3280.0417
ASP 3290.0262
ASN 3300.0305
ARG 3310.0490
ARG 3320.0368
ILE 3330.0245
MET 3340.0227
ASN 3350.0171
GLU 3360.0090
ALA 3370.0150
LYS 3380.0142
ASP 3390.0303
PHE 3400.0309
TYR 3410.0214
LEU 3420.0138
ALA 3430.0145
THR 3440.0151
SER 3450.0086
PRO 3460.0103
PRO 3470.0123
ASP 3480.0079
SER 3490.0103
PHE 3500.0029
LEU 3510.0063
ASP 3520.0080
ASP 3530.0077
HIS 3540.0083
HIS 3550.0100
LEU 3560.0095
THR 3570.0068
ARG 3580.0083
PRO 3590.0058
HIS 3600.0082
PRO 3610.0084
GLU 3620.0095
ARG 3630.0116
VAL 3640.0132
PRO 3650.0242
PHE 3660.0297
LEU 3670.0225
VAL 3680.0338
ALA 3690.0244
GLU 3700.0196
THR 3710.0491
PRO 3720.0421
ARG 3730.0174
ALA 3740.0257
ALA 3940.0613
LYS 3950.0467
TRP 3960.0311
HIS 3970.0209
LEU 3980.0162
GLY 3990.0208
ILE 4000.0098
ARG 4010.0082
SER 4020.0085
GLN 4030.0162
SER 4040.0231
ARG 4050.0231
PRO 4060.0143
ASN 4070.0156
ASP 4080.0228
ILE 4090.0182
MET 4100.0165
ALA 4110.0162
GLU 4120.0134
VAL 4130.0196
CYS 4140.0193
ARG 4150.0153
ALA 4160.0178
ILE 4170.0210
LYS 4180.0215
GLN 4190.0199
LEU 4200.0202
ASP 4210.0210
TYR 4220.0198
GLU 4230.0201
TRP 4240.0265
LYS 4250.0263
VAL 4260.0244
VAL 4270.0237
ASN 4280.0171
PRO 4290.0212
TYR 4300.0128
TYR 4310.0147
LEU 4320.0201
ARG 4330.0229
VAL 4340.0219
ARG 4350.0196
ARG 4360.0149
LYS 4370.0088
ASN 4380.0126
PRO 4390.0172
VAL 4400.0297
THR 4410.0256
SER 4420.0135
THR 4430.0161
PHE 4440.0152
SER 4450.0155
LYS 4460.0178
MET 4470.0197
SER 4480.0144
LEU 4490.0122
GLN 4500.0095
LEU 4510.0085
TYR 4520.0099
GLN 4530.0108
VAL 4540.0185
ASP 4550.0215
SER 4560.0274
ARG 4570.0194
THR 4580.0149
TYR 4590.0111
LEU 4600.0047
LEU 4610.0037
ASP 4620.0059
PHE 4630.0090
ARG 4640.0099
SER 4650.0102
ILE 4660.0214
ASP 4670.0217
ASP 4680.0171
GLU 4690.0744
ILE 4700.0297
LYS 2030.0404
SER 2040.0207
PRO 2050.0104
PRO 2060.0110
ILE 2070.0122
LEU 2080.0122
PRO 2090.0081
PRO 2100.0068
HIS 2110.0068
LEU 2120.0065
LEU 2130.0063
GLN 2140.0059
VAL 2150.0083
ILE 2160.0062
LEU 2170.0128
ASN 2180.0110
LYS 2190.0112
ASP 2200.0165
THR 2210.0107
ASN 2220.0067
ILE 2230.0052
SER 2240.0100
CYS 2250.0147
ASP 2260.0184
PRO 2270.0193
ALA 2280.0188
LEU 2290.0189
LEU 2300.0056
PRO 2310.0052
GLU 2320.0043
PRO 2330.0043
ASN 2340.0046
HIS 2350.0059
VAL 2360.0048
MET 2370.0039
LEU 2380.0062
ASN 2390.0086
HIS 2400.0077
LEU 2410.0079
TYR 2420.0155
ALA 2430.0246
LEU 2440.0348
SER 2450.0583
ILE 2460.0365
LYS 2470.0399
ASP 2480.0228
SER 2490.0140
VAL 2500.0470
MET 2510.0298
VAL 2520.0229
LEU 2530.0161
SER 2540.0073
ALA 2550.0037
THR 2560.0025
HIS 2570.0050
ARG 2580.0078
TYR 2590.0145
LYS 2600.0076
LYS 2610.0055
LYS 2620.0100
TYR 2630.0064
VAL 2640.0058
THR 2650.0028
THR 2660.0075
LEU 2670.0128
LEU 2680.0134
TYR 2690.0289
LYS 2700.0310
PRO 2710.0399
PRO 5280.0285
GLY 5290.0239
SER 5300.0231
HIS 5310.0165
THR 5320.0152
ILE 5330.0132
GLU 5340.0105
PHE 5350.0129
PHE 5360.0098
GLU 5370.0050
MET 5380.0066
CYS 5390.0078
ALA 5400.0088
ASN 5410.0111
LEU 5420.0133
ILE 5430.0125
LYS 5440.0149
ILE 5450.0136
LEU 5460.0146
ALA 5470.0325
GLN 5480.0413

If you find results from this site helpful for your research, please cite one of our papers:

elNémo is maintained by Yves-Henri Sanejouand.
It was developed by Karsten Suhre.
Between 2003 and 2014, it was hosted by IGS (Marseille).
Between 2015 and 2025, it was hosted by US2B (Nantes).
Last modification: april 24th, 2026.