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***  Apo AMPK  ***

<R2> analysis for 260711175133601569

---  normal mode 89  ---

This page gives a visualization of the normalized mean square displacement <R2> of all C-alpha atoms in the protein that are associated to this mode (black bars). The three components of the corresponding eigenvector are shown on the left (colored bars). Here is the raw data for <R2> and for the eigenvector (shift-click on the links for download).

XYZresidue<R2><R2>max = 0.0852
ARG 100.0062
VAL 110.0050
LYS 120.0025
ILE 130.0070
GLY 140.0070
HIS 150.0039
TYR 160.0035
ILE 170.0040
LEU 180.0073
GLY 190.0076
ASP 200.0098
THR 210.0103
LEU 220.0090
GLY 230.0093
VAL 240.0177
GLY 250.0108
THR 260.0047
PHE 270.0139
GLY 280.0137
LYS 290.0126
VAL 300.0056
LYS 310.0063
VAL 320.0085
GLY 330.0118
LYS 340.0107
HIS 350.0080
GLU 360.0110
LEU 370.0171
THR 380.0189
GLY 390.0187
HIS 400.0122
LYS 410.0128
VAL 420.0139
ALA 430.0089
VAL 440.0078
LYS 450.0068
ILE 460.0092
LEU 470.0115
ASN 480.0105
ARG 490.0059
GLN 500.0098
LYS 510.0141
ILE 520.0143
ARG 530.0257
SER 540.0353
LEU 550.0174
ASP 560.0227
VAL 570.0353
VAL 580.0330
GLY 590.0329
LYS 600.0339
ILE 610.0267
ARG 620.0281
ARG 630.0199
GLU 640.0186
ILE 650.0164
GLN 660.0149
ASN 670.0147
LEU 680.0136
LYS 690.0152
LEU 700.0163
PHE 710.0145
ARG 720.0140
HIS 730.0059
PRO 740.0050
HIS 750.0050
ILE 760.0035
ILE 770.0044
LYS 780.0044
LEU 790.0054
TYR 800.0090
GLN 810.0097
VAL 820.0088
ILE 830.0113
SER 840.0126
THR 850.0150
PRO 860.0178
SER 870.0073
ASP 880.0046
ILE 890.0070
PHE 900.0047
MET 910.0074
VAL 920.0088
MET 930.0085
GLU 940.0118
TYR 950.0154
VAL 960.0189
SER 970.0281
GLY 980.0195
GLY 990.0161
GLU 1000.0125
LEU 1010.0101
PHE 1020.0085
ASP 1030.0133
TYR 1040.0111
ILE 1050.0093
CYS 1060.0157
LYS 1070.0176
ASN 1080.0099
GLY 1090.0131
ARG 1100.0088
LEU 1110.0063
ASP 1120.0123
GLU 1130.0106
LYS 1140.0123
GLU 1150.0116
SER 1160.0128
ARG 1170.0122
ARG 1180.0152
LEU 1190.0134
PHE 1200.0117
GLN 1210.0082
GLN 1220.0080
ILE 1230.0086
LEU 1240.0057
SER 1250.0042
GLY 1260.0038
VAL 1270.0050
ASP 1280.0038
TYR 1290.0085
CYS 1300.0101
HIS 1310.0078
ARG 1320.0088
HIS 1330.0138
MET 1340.0128
VAL 1350.0129
VAL 1360.0128
HIS 1370.0113
ARG 1380.0111
ASP 1390.0071
LEU 1400.0067
LYS 1410.0042
PRO 1420.0066
GLU 1430.0061
ASN 1440.0061
VAL 1450.0072
LEU 1460.0108
LEU 1470.0158
ASP 1480.0296
ALA 1490.0557
HIS 1500.0632
MET 1510.0290
ASN 1520.0191
ALA 1530.0121
LYS 1540.0063
ILE 1550.0037
ALA 1560.0029
ASP 1570.0091
PHE 1580.0100
GLY 1590.0109
LEU 1600.0136
SER 1610.0142
ASN 1620.0148
MET 1630.0152
MET 1640.0113
SER 1650.0085
ASP 1660.0045
GLY 1670.0038
GLU 1680.0037
PHE 1690.0101
LEU 1700.0111
ARG 1710.0106
SER 1730.0130
CYS 1740.0132
GLY 1750.0099
SER 1760.0087
PRO 1770.0091
ASN 1780.0091
TYR 1790.0052
ALA 1800.0075
ALA 1810.0082
PRO 1820.0082
GLU 1830.0094
VAL 1840.0105
ILE 1850.0106
SER 1860.0113
GLY 1870.0115
ARG 1880.0100
LEU 1890.0104
TYR 1900.0106
ALA 1910.0095
GLY 1920.0094
PRO 1930.0081
GLU 1940.0069
VAL 1950.0071
ASP 1960.0070
ILE 1970.0034
TRP 1980.0031
SER 1990.0037
SER 2000.0023
GLY 2010.0019
VAL 2020.0017
ILE 2030.0045
LEU 2040.0039
TYR 2050.0036
ALA 2060.0066
LEU 2070.0061
LEU 2080.0046
CYS 2090.0066
GLY 2100.0083
THR 2110.0071
LEU 2120.0065
PRO 2130.0057
PHE 2140.0076
ASP 2150.0178
ASP 2160.0177
ASP 2170.0181
HIS 2180.0210
VAL 2190.0170
PRO 2200.0171
THR 2210.0177
LEU 2220.0169
PHE 2230.0144
LYS 2240.0116
LYS 2250.0136
ILE 2260.0122
CYS 2270.0099
ASP 2280.0079
GLY 2290.0062
ILE 2300.0056
PHE 2310.0074
TYR 2320.0117
THR 2330.0093
PRO 2340.0152
GLN 2350.0245
TYR 2360.0110
LEU 2370.0074
ASN 2380.0080
PRO 2390.0111
SER 2400.0135
VAL 2410.0127
ILE 2420.0111
SER 2430.0118
LEU 2440.0127
LEU 2450.0085
LYS 2460.0087
HIS 2470.0088
MET 2480.0041
LEU 2490.0043
GLN 2500.0045
VAL 2510.0025
ASP 2520.0038
PRO 2530.0039
MET 2540.0069
LYS 2550.0091
ARG 2560.0061
ALA 2570.0082
THR 2580.0094
ILE 2590.0085
LYS 2600.0167
ASP 2610.0158
ILE 2620.0135
ARG 2630.0135
GLU 2640.0210
HIS 2650.0211
GLU 2660.0264
TRP 2670.0187
PHE 2680.0153
LYS 2690.0209
GLN 2700.0191
ASP 2710.0183
LEU 2720.0127
PRO 2730.0092
LYS 2740.0094
TYR 2750.0054
LEU 2760.0055
PHE 2770.0067
PRO 2780.0145
GLU 2790.0155
ASP 2800.0170
ALA 3210.0176
VAL 3220.0073
ALA 3230.0122
TYR 3240.0396
HIS 3250.0334
LEU 3260.0108
ILE 3270.0154
ILE 3280.0385
ASP 3290.0337
ASN 3300.0049
ARG 3310.0243
ARG 3320.0176
ILE 3330.0210
MET 3340.0256
ASN 3350.0197
GLU 3360.0182
ALA 3370.0174
LYS 3380.0177
ASP 3390.0084
PHE 3400.0102
TYR 3410.0109
LEU 3420.0069
ALA 3430.0050
THR 3440.0021
SER 3450.0047
PRO 3460.0046
PRO 3470.0041
ASP 3480.0036
SER 3490.0046
PHE 3500.0046
LEU 3510.0042
ASP 3520.0031
ASP 3530.0043
HIS 3540.0024
HIS 3550.0012
LEU 3560.0036
THR 3570.0096
ARG 3580.0070
PRO 3590.0042
HIS 3600.0033
PRO 3610.0039
GLU 3620.0037
ARG 3630.0024
VAL 3640.0019
PRO 3650.0024
PHE 3660.0019
LEU 3670.0063
VAL 3680.0078
ALA 3690.0049
GLU 3700.0096
THR 3710.0130
PRO 3720.0061
ARG 3730.0036
ALA 3740.0131
ALA 3940.0615
LYS 3950.0498
TRP 3960.0325
HIS 3970.0170
LEU 3980.0110
GLY 3990.0064
ILE 4000.0105
ARG 4010.0110
SER 4020.0121
GLN 4030.0173
SER 4040.0098
ARG 4050.0042
PRO 4060.0081
ASN 4070.0105
ASP 4080.0111
ILE 4090.0108
MET 4100.0113
ALA 4110.0121
GLU 4120.0143
VAL 4130.0095
CYS 4140.0038
ARG 4150.0012
ALA 4160.0132
ILE 4170.0160
LYS 4180.0164
GLN 4190.0209
LEU 4200.0273
ASP 4210.0281
TYR 4220.0202
GLU 4230.0152
TRP 4240.0088
LYS 4250.0091
VAL 4260.0124
VAL 4270.0186
ASN 4280.0203
PRO 4290.0162
TYR 4300.0105
TYR 4310.0101
LEU 4320.0049
ARG 4330.0054
VAL 4340.0082
ARG 4350.0108
ARG 4360.0202
LYS 4370.0187
ASN 4380.0123
PRO 4390.0202
VAL 4400.0159
THR 4410.0104
SER 4420.0141
THR 4430.0132
PHE 4440.0172
SER 4450.0138
LYS 4460.0130
MET 4470.0120
SER 4480.0068
LEU 4490.0073
GLN 4500.0104
LEU 4510.0105
TYR 4520.0101
GLN 4530.0093
VAL 4540.0124
ASP 4550.0117
SER 4560.0103
ARG 4570.0127
THR 4580.0142
TYR 4590.0133
LEU 4600.0071
LEU 4610.0078
ASP 4620.0078
PHE 4630.0064
ARG 4640.0065
SER 4650.0076
ILE 4660.0144
ASP 4670.0183
ASP 4680.0179
GLU 4690.0210
ILE 4700.0103
LYS 2030.0253
SER 2040.0149
PRO 2050.0132
PRO 2060.0093
ILE 2070.0091
LEU 2080.0109
PRO 2090.0038
PRO 2100.0039
HIS 2110.0048
LEU 2120.0047
LEU 2130.0058
GLN 2140.0074
VAL 2150.0137
ILE 2160.0103
LEU 2170.0165
ASN 2180.0231
LYS 2190.0130
ASP 2200.0095
THR 2210.0067
ASN 2220.0067
ILE 2230.0071
SER 2240.0060
CYS 2250.0014
ASP 2260.0054
PRO 2270.0075
ALA 2280.0109
LEU 2290.0081
LEU 2300.0029
PRO 2310.0039
GLU 2320.0047
PRO 2330.0046
ASN 2340.0044
HIS 2350.0044
VAL 2360.0029
MET 2370.0036
LEU 2380.0048
ASN 2390.0059
HIS 2400.0055
LEU 2410.0061
TYR 2420.0112
ALA 2430.0154
LEU 2440.0227
SER 2450.0161
ILE 2460.0066
LYS 2470.0167
ASP 2480.0223
SER 2490.0210
VAL 2500.0116
MET 2510.0064
VAL 2520.0154
LEU 2530.0138
SER 2540.0142
ALA 2550.0094
THR 2560.0069
HIS 2570.0043
ARG 2580.0077
TYR 2590.0198
LYS 2600.0221
LYS 2610.0081
LYS 2620.0146
TYR 2630.0056
VAL 2640.0081
THR 2650.0076
THR 2660.0170
LEU 2670.0197
LEU 2680.0168
TYR 2690.0222
LYS 2700.0170
PRO 2710.0220
PRO 5280.0055
GLY 5290.0030
SER 5300.0039
HIS 5310.0039
THR 5320.0044
ILE 5330.0034
GLU 5340.0028
PHE 5350.0049
PHE 5360.0035
GLU 5370.0112
MET 5380.0147
CYS 5390.0152
ALA 5400.0232
ASN 5410.0249
LEU 5420.0239
ILE 5430.0230
LYS 5440.0255
ILE 5450.0178
LEU 5460.0254
ALA 5470.0619
GLN 5480.0852

If you find results from this site helpful for your research, please cite one of our papers:

elNémo is maintained by Yves-Henri Sanejouand.
It was developed by Karsten Suhre.
Between 2003 and 2014, it was hosted by IGS (Marseille).
Between 2015 and 2025, it was hosted by US2B (Nantes).
Last modification: april 24th, 2026.