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***  Apo AMPK  ***

<R2> analysis for 260711175133601569

---  normal mode 9  ---

This page gives a visualization of the normalized mean square displacement <R2> of all C-alpha atoms in the protein that are associated to this mode (black bars). The three components of the corresponding eigenvector are shown on the left (colored bars). Here is the raw data for <R2> and for the eigenvector (shift-click on the links for download).

XYZresidue<R2><R2>max = 0.1255
ARG 100.0196
VAL 110.0185
LYS 120.0183
ILE 130.0169
GLY 140.0184
HIS 150.0191
TYR 160.0170
ILE 170.0175
LEU 180.0155
GLY 190.0149
ASP 200.0130
THR 210.0114
LEU 220.0090
GLY 230.0078
VAL 240.0073
GLY 250.0070
THR 260.0065
PHE 270.0090
GLY 280.0099
LYS 290.0102
VAL 300.0095
LYS 310.0113
VAL 320.0121
GLY 330.0139
LYS 340.0161
HIS 350.0179
GLU 360.0202
LEU 370.0215
THR 380.0202
GLY 390.0183
HIS 400.0164
LYS 410.0140
VAL 420.0121
ALA 430.0102
VAL 440.0106
LYS 450.0094
ILE 460.0114
LEU 470.0116
ASN 480.0140
ARG 490.0147
GLN 500.0162
LYS 510.0143
ILE 520.0127
ARG 530.0145
SER 540.0156
LEU 550.0137
ASP 560.0125
VAL 570.0101
VAL 580.0103
GLY 590.0083
LYS 600.0071
ILE 610.0069
ARG 620.0068
ARG 630.0047
GLU 640.0041
ILE 650.0053
GLN 660.0041
ASN 670.0022
LEU 680.0037
LYS 690.0052
LEU 700.0047
PHE 710.0047
ARG 720.0067
HIS 730.0068
PRO 740.0080
HIS 750.0067
ILE 760.0055
ILE 770.0060
LYS 780.0071
LEU 790.0075
TYR 800.0099
GLN 810.0105
VAL 820.0106
ILE 830.0129
SER 840.0139
THR 850.0163
PRO 860.0175
SER 870.0171
ASP 880.0147
ILE 890.0126
PHE 900.0119
MET 910.0096
VAL 920.0105
MET 930.0090
GLU 940.0094
TYR 950.0097
VAL 960.0092
SER 970.0091
GLY 980.0078
GLY 990.0059
GLU 1000.0043
LEU 1010.0050
PHE 1020.0035
ASP 1030.0044
TYR 1040.0059
ILE 1050.0053
CYS 1060.0048
LYS 1070.0062
ASN 1080.0077
GLY 1090.0080
ARG 1100.0076
LEU 1110.0087
ASP 1120.0105
GLU 1130.0111
LYS 1140.0115
GLU 1150.0100
SER 1160.0087
ARG 1170.0095
ARG 1180.0097
LEU 1190.0079
PHE 1200.0075
GLN 1210.0085
GLN 1220.0077
ILE 1230.0061
LEU 1240.0064
SER 1250.0069
GLY 1260.0054
VAL 1270.0046
ASP 1280.0057
TYR 1290.0050
CYS 1300.0033
HIS 1310.0040
ARG 1320.0044
HIS 1330.0030
MET 1340.0035
VAL 1350.0022
VAL 1360.0030
HIS 1370.0022
ARG 1380.0029
ASP 1390.0022
LEU 1400.0024
LYS 1410.0024
PRO 1420.0030
GLU 1430.0020
ASN 1440.0022
VAL 1450.0037
LEU 1460.0052
LEU 1470.0071
ASP 1480.0089
ALA 1490.0106
HIS 1500.0111
MET 1510.0092
ASN 1520.0086
ALA 1530.0067
LYS 1540.0059
ILE 1550.0039
ALA 1560.0035
ASP 1570.0026
PHE 1580.0020
GLY 1590.0034
LEU 1600.0030
SER 1610.0022
ASN 1620.0031
MET 1630.0032
MET 1640.0050
SER 1650.0066
ASP 1660.0089
GLY 1670.0081
GLU 1680.0078
PHE 1690.0060
LEU 1700.0059
ARG 1710.0060
SER 1730.0055
CYS 1740.0045
GLY 1750.0039
SER 1760.0037
PRO 1770.0050
ASN 1780.0048
TYR 1790.0044
ALA 1800.0050
ALA 1810.0062
PRO 1820.0073
GLU 1830.0073
VAL 1840.0063
ILE 1850.0071
SER 1860.0077
GLY 1870.0070
ARG 1880.0061
LEU 1890.0059
TYR 1900.0059
ALA 1910.0063
GLY 1920.0050
PRO 1930.0051
GLU 1940.0060
VAL 1950.0053
ASP 1960.0044
ILE 1970.0058
TRP 1980.0061
SER 1990.0047
SER 2000.0053
GLY 2010.0067
VAL 2020.0060
ILE 2030.0052
LEU 2040.0069
TYR 2050.0071
ALA 2060.0059
LEU 2070.0068
LEU 2080.0083
CYS 2090.0077
GLY 2100.0061
THR 2110.0056
LEU 2120.0056
PRO 2130.0071
PHE 2140.0069
ASP 2150.0063
ASP 2160.0070
ASP 2170.0067
HIS 2180.0081
VAL 2190.0077
PRO 2200.0092
THR 2210.0095
LEU 2220.0080
PHE 2230.0082
LYS 2240.0097
LYS 2250.0092
ILE 2260.0083
CYS 2270.0094
ASP 2280.0105
GLY 2290.0103
ILE 2300.0107
PHE 2310.0098
TYR 2320.0103
THR 2330.0106
PRO 2340.0109
GLN 2350.0122
TYR 2360.0121
LEU 2370.0114
ASN 2380.0126
PRO 2390.0133
SER 2400.0130
VAL 2410.0111
ILE 2420.0112
SER 2430.0118
LEU 2440.0103
LEU 2450.0091
LYS 2460.0102
HIS 2470.0098
MET 2480.0081
LEU 2490.0082
GLN 2500.0093
VAL 2510.0093
ASP 2520.0094
PRO 2530.0077
MET 2540.0080
LYS 2550.0093
ARG 2560.0082
ALA 2570.0086
THR 2580.0079
ILE 2590.0075
LYS 2600.0090
ASP 2610.0099
ILE 2620.0093
ARG 2630.0097
GLU 2640.0114
HIS 2650.0117
GLU 2660.0131
TRP 2670.0121
PHE 2680.0108
LYS 2690.0121
GLN 2700.0130
ASP 2710.0130
LEU 2720.0117
PRO 2730.0114
LYS 2740.0110
TYR 2750.0101
LEU 2760.0088
PHE 2770.0079
PRO 2780.0069
GLU 2790.0082
ASP 2800.0087
ALA 3210.1255
VAL 3220.1037
ALA 3230.0828
TYR 3240.0734
HIS 3250.0637
LEU 3260.0502
ILE 3270.0486
ILE 3280.0353
ASP 3290.0250
ASN 3300.0227
ARG 3310.0184
ARG 3320.0052
ILE 3330.0116
MET 3340.0161
ASN 3350.0128
GLU 3360.0130
ALA 3370.0167
LYS 3380.0164
ASP 3390.0187
PHE 3400.0200
TYR 3410.0178
LEU 3420.0166
ALA 3430.0146
THR 3440.0170
SER 3450.0167
PRO 3460.0191
PRO 3470.0271
ASP 3480.0326
SER 3490.0475
PHE 3500.0511
LEU 3510.0676
ASP 3520.0668
ASP 3530.0754
HIS 3540.0628
HIS 3550.0487
LEU 3560.0460
THR 3570.0328
ARG 3580.0293
PRO 3590.0216
HIS 3600.0174
PRO 3610.0153
GLU 3620.0090
ARG 3630.0088
VAL 3640.0146
PRO 3650.0140
PHE 3660.0146
LEU 3670.0189
VAL 3680.0254
ALA 3690.0283
GLU 3700.0295
THR 3710.0326
PRO 3720.0413
ARG 3730.0510
ALA 3740.0450
ALA 3940.0044
LYS 3950.0037
TRP 3960.0018
HIS 3970.0007
LEU 3980.0020
GLY 3990.0037
ILE 4000.0039
ARG 4010.0040
SER 4020.0057
GLN 4030.0066
SER 4040.0082
ARG 4050.0084
PRO 4060.0074
ASN 4070.0095
ASP 4080.0105
ILE 4090.0091
MET 4100.0100
ALA 4110.0120
GLU 4120.0117
VAL 4130.0106
CYS 4140.0127
ARG 4150.0139
ALA 4160.0125
ILE 4170.0130
LYS 4180.0153
GLN 4190.0151
LEU 4200.0144
ASP 4210.0162
TYR 4220.0150
GLU 4230.0159
TRP 4240.0143
LYS 4250.0145
VAL 4260.0132
VAL 4270.0123
ASN 4280.0107
PRO 4290.0102
TYR 4300.0084
TYR 4310.0093
LEU 4320.0109
ARG 4330.0123
VAL 4340.0127
ARG 4350.0143
ARG 4360.0146
LYS 4370.0164
ASN 4380.0155
PRO 4390.0169
VAL 4400.0168
THR 4410.0174
SER 4420.0183
THR 4430.0170
PHE 4440.0162
SER 4450.0138
LYS 4460.0129
MET 4470.0107
SER 4480.0096
LEU 4490.0083
GLN 4500.0072
LEU 4510.0059
TYR 4520.0040
GLN 4530.0026
VAL 4540.0014
ASP 4550.0029
SER 4560.0038
ARG 4570.0052
THR 4580.0042
TYR 4590.0038
LEU 4600.0035
LEU 4610.0051
ASP 4620.0052
PHE 4630.0063
ARG 4640.0077
SER 4650.0094
ILE 4660.0119
ASP 4670.0137
ASP 4680.0162
GLU 4690.0188
ILE 4700.0215
LYS 2030.0064
SER 2040.0052
PRO 2050.0053
PRO 2060.0046
ILE 2070.0033
LEU 2080.0037
PRO 2090.0054
PRO 2100.0054
HIS 2110.0057
LEU 2120.0047
LEU 2130.0038
GLN 2140.0051
VAL 2150.0045
ILE 2160.0065
LEU 2170.0051
ASN 2180.0055
LYS 2190.0079
ASP 2200.0097
THR 2210.0108
ASN 2220.0161
ILE 2230.0165
SER 2240.0193
CYS 2250.0164
ASP 2260.0134
PRO 2270.0083
ALA 2280.0085
LEU 2290.0115
LEU 2300.0105
PRO 2310.0111
GLU 2320.0115
PRO 2330.0088
ASN 2340.0082
HIS 2350.0086
VAL 2360.0075
MET 2370.0068
LEU 2380.0081
ASN 2390.0082
HIS 2400.0062
LEU 2410.0050
TYR 2420.0031
ALA 2430.0019
LEU 2440.0011
SER 2450.0034
ILE 2460.0045
LYS 2470.0050
ASP 2480.0061
SER 2490.0063
VAL 2500.0044
MET 2510.0041
VAL 2520.0025
LEU 2530.0038
SER 2540.0045
ALA 2550.0062
THR 2560.0079
HIS 2570.0099
ARG 2580.0118
TYR 2590.0140
LYS 2600.0160
LYS 2610.0152
LYS 2620.0140
TYR 2630.0116
VAL 2640.0104
THR 2650.0080
THR 2660.0073
LEU 2670.0052
LEU 2680.0050
TYR 2690.0037
LYS 2700.0054
PRO 2710.0063
PRO 5280.0163
GLY 5290.0138
SER 5300.0123
HIS 5310.0124
THR 5320.0102
ILE 5330.0094
GLU 5340.0109
PHE 5350.0097
PHE 5360.0078
GLU 5370.0091
MET 5380.0101
CYS 5390.0081
ALA 5400.0077
ASN 5410.0099
LEU 5420.0096
ILE 5430.0077
LYS 5440.0090
ILE 5450.0106
LEU 5460.0092
ALA 5470.0081
GLN 5480.0097

If you find results from this site helpful for your research, please cite one of our papers:

elNémo is maintained by Yves-Henri Sanejouand.
It was developed by Karsten Suhre.
Between 2003 and 2014, it was hosted by IGS (Marseille).
Between 2015 and 2025, it was hosted by US2B (Nantes).
Last modification: april 24th, 2026.