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***  Apo AMPK  ***

<R2> analysis for 260711175133601569

---  normal mode 90  ---

This page gives a visualization of the normalized mean square displacement <R2> of all C-alpha atoms in the protein that are associated to this mode (black bars). The three components of the corresponding eigenvector are shown on the left (colored bars). Here is the raw data for <R2> and for the eigenvector (shift-click on the links for download).

XYZresidue<R2><R2>max = 0.0653
ARG 100.0151
VAL 110.0130
LYS 120.0095
ILE 130.0055
GLY 140.0056
HIS 150.0051
TYR 160.0065
ILE 170.0070
LEU 180.0061
GLY 190.0072
ASP 200.0187
THR 210.0190
LEU 220.0112
GLY 230.0106
VAL 240.0159
GLY 250.0141
THR 260.0133
PHE 270.0149
GLY 280.0165
LYS 290.0144
VAL 300.0084
LYS 310.0044
VAL 320.0042
GLY 330.0064
LYS 340.0093
HIS 350.0068
GLU 360.0081
LEU 370.0098
THR 380.0105
GLY 390.0119
HIS 400.0067
LYS 410.0085
VAL 420.0082
ALA 430.0050
VAL 440.0025
LYS 450.0048
ILE 460.0093
LEU 470.0080
ASN 480.0054
ARG 490.0051
GLN 500.0060
LYS 510.0033
ILE 520.0094
ARG 530.0235
SER 540.0230
LEU 550.0108
ASP 560.0197
VAL 570.0198
VAL 580.0118
GLY 590.0138
LYS 600.0164
ILE 610.0126
ARG 620.0153
ARG 630.0125
GLU 640.0085
ILE 650.0082
GLN 660.0084
ASN 670.0085
LEU 680.0092
LYS 690.0093
LEU 700.0117
PHE 710.0121
ARG 720.0137
HIS 730.0121
PRO 740.0108
HIS 750.0118
ILE 760.0118
ILE 770.0114
LYS 780.0104
LEU 790.0085
TYR 800.0068
GLN 810.0053
VAL 820.0021
ILE 830.0014
SER 840.0018
THR 850.0010
PRO 860.0035
SER 870.0025
ASP 880.0016
ILE 890.0024
PHE 900.0027
MET 910.0028
VAL 920.0036
MET 930.0066
GLU 940.0097
TYR 950.0128
VAL 960.0223
SER 970.0379
GLY 980.0308
GLY 990.0323
GLU 1000.0191
LEU 1010.0142
PHE 1020.0227
ASP 1030.0281
TYR 1040.0156
ILE 1050.0246
CYS 1060.0543
LYS 1070.0394
ASN 1080.0172
GLY 1090.0269
ARG 1100.0229
LEU 1110.0195
ASP 1120.0248
GLU 1130.0130
LYS 1140.0205
GLU 1150.0165
SER 1160.0126
ARG 1170.0094
ARG 1180.0122
LEU 1190.0087
PHE 1200.0056
GLN 1210.0084
GLN 1220.0085
ILE 1230.0088
LEU 1240.0083
SER 1250.0093
GLY 1260.0111
VAL 1270.0091
ASP 1280.0082
TYR 1290.0095
CYS 1300.0086
HIS 1310.0058
ARG 1320.0058
HIS 1330.0082
MET 1340.0068
VAL 1350.0061
VAL 1360.0069
HIS 1370.0054
ARG 1380.0059
ASP 1390.0022
LEU 1400.0019
LYS 1410.0049
PRO 1420.0103
GLU 1430.0112
ASN 1440.0083
VAL 1450.0147
LEU 1460.0154
LEU 1470.0137
ASP 1480.0332
ALA 1490.0406
HIS 1500.0404
MET 1510.0178
ASN 1520.0152
ALA 1530.0105
LYS 1540.0098
ILE 1550.0093
ALA 1560.0080
ASP 1570.0040
PHE 1580.0044
GLY 1590.0055
LEU 1600.0069
SER 1610.0064
ASN 1620.0076
MET 1630.0085
MET 1640.0090
SER 1650.0109
ASP 1660.0108
GLY 1670.0102
GLU 1680.0096
PHE 1690.0097
LEU 1700.0098
ARG 1710.0095
SER 1730.0135
CYS 1740.0130
GLY 1750.0106
SER 1760.0126
PRO 1770.0125
ASN 1780.0108
TYR 1790.0096
ALA 1800.0107
ALA 1810.0093
PRO 1820.0140
GLU 1830.0150
VAL 1840.0154
ILE 1850.0147
SER 1860.0146
GLY 1870.0137
ARG 1880.0103
LEU 1890.0093
TYR 1900.0112
ALA 1910.0117
GLY 1920.0110
PRO 1930.0103
GLU 1940.0108
VAL 1950.0121
ASP 1960.0099
ILE 1970.0101
TRP 1980.0090
SER 1990.0097
SER 2000.0076
GLY 2010.0048
VAL 2020.0057
ILE 2030.0064
LEU 2040.0061
TYR 2050.0068
ALA 2060.0129
LEU 2070.0100
LEU 2080.0126
CYS 2090.0156
GLY 2100.0159
THR 2110.0203
LEU 2120.0153
PRO 2130.0110
PHE 2140.0113
ASP 2150.0148
ASP 2160.0172
ASP 2170.0338
HIS 2180.0187
VAL 2190.0235
PRO 2200.0236
THR 2210.0105
LEU 2220.0108
PHE 2230.0104
LYS 2240.0095
LYS 2250.0095
ILE 2260.0100
CYS 2270.0119
ASP 2280.0081
GLY 2290.0119
ILE 2300.0275
PHE 2310.0228
TYR 2320.0381
THR 2330.0105
PRO 2340.0378
GLN 2350.0653
TYR 2360.0216
LEU 2370.0170
ASN 2380.0200
PRO 2390.0182
SER 2400.0164
VAL 2410.0115
ILE 2420.0108
SER 2430.0112
LEU 2440.0091
LEU 2450.0056
LYS 2460.0033
HIS 2470.0077
MET 2480.0085
LEU 2490.0082
GLN 2500.0095
VAL 2510.0127
ASP 2520.0141
PRO 2530.0154
MET 2540.0153
LYS 2550.0143
ARG 2560.0140
ALA 2570.0136
THR 2580.0112
ILE 2590.0086
LYS 2600.0082
ASP 2610.0080
ILE 2620.0054
ARG 2630.0053
GLU 2640.0069
HIS 2650.0057
GLU 2660.0090
TRP 2670.0049
PHE 2680.0059
LYS 2690.0098
GLN 2700.0113
ASP 2710.0175
LEU 2720.0083
PRO 2730.0078
LYS 2740.0137
TYR 2750.0105
LEU 2760.0097
PHE 2770.0132
PRO 2780.0177
GLU 2790.0194
ASP 2800.0178
ALA 3210.0171
VAL 3220.0220
ALA 3230.0173
TYR 3240.0263
HIS 3250.0219
LEU 3260.0089
ILE 3270.0140
ILE 3280.0244
ASP 3290.0252
ASN 3300.0107
ARG 3310.0091
ARG 3320.0073
ILE 3330.0173
MET 3340.0264
ASN 3350.0327
GLU 3360.0282
ALA 3370.0229
LYS 3380.0288
ASP 3390.0206
PHE 3400.0203
TYR 3410.0206
LEU 3420.0162
ALA 3430.0135
THR 3440.0183
SER 3450.0152
PRO 3460.0060
PRO 3470.0108
ASP 3480.0092
SER 3490.0088
PHE 3500.0156
LEU 3510.0167
ASP 3520.0113
ASP 3530.0081
HIS 3540.0063
HIS 3550.0100
LEU 3560.0025
THR 3570.0067
ARG 3580.0075
PRO 3590.0048
HIS 3600.0039
PRO 3610.0051
GLU 3620.0030
ARG 3630.0078
VAL 3640.0109
PRO 3650.0207
PHE 3660.0242
LEU 3670.0170
VAL 3680.0269
ALA 3690.0224
GLU 3700.0172
THR 3710.0390
PRO 3720.0371
ARG 3730.0140
ALA 3740.0185
ALA 3940.0335
LYS 3950.0258
TRP 3960.0133
HIS 3970.0062
LEU 3980.0051
GLY 3990.0065
ILE 4000.0056
ARG 4010.0061
SER 4020.0056
GLN 4030.0078
SER 4040.0085
ARG 4050.0159
PRO 4060.0108
ASN 4070.0157
ASP 4080.0163
ILE 4090.0112
MET 4100.0124
ALA 4110.0167
GLU 4120.0163
VAL 4130.0144
CYS 4140.0186
ARG 4150.0223
ALA 4160.0170
ILE 4170.0170
LYS 4180.0278
GLN 4190.0279
LEU 4200.0238
ASP 4210.0231
TYR 4220.0110
GLU 4230.0078
TRP 4240.0061
LYS 4250.0100
VAL 4260.0160
VAL 4270.0048
ASN 4280.0064
PRO 4290.0151
TYR 4300.0085
TYR 4310.0042
LEU 4320.0053
ARG 4330.0056
VAL 4340.0029
ARG 4350.0014
ARG 4360.0063
LYS 4370.0042
ASN 4380.0030
PRO 4390.0102
VAL 4400.0127
THR 4410.0089
SER 4420.0032
THR 4430.0011
PHE 4440.0041
SER 4450.0052
LYS 4460.0048
MET 4470.0045
SER 4480.0046
LEU 4490.0051
GLN 4500.0054
LEU 4510.0091
TYR 4520.0099
GLN 4530.0116
VAL 4540.0126
ASP 4550.0134
SER 4560.0159
ARG 4570.0050
THR 4580.0061
TYR 4590.0074
LEU 4600.0079
LEU 4610.0071
ASP 4620.0057
PHE 4630.0047
ARG 4640.0052
SER 4650.0057
ILE 4660.0078
ASP 4670.0080
ASP 4680.0060
GLU 4690.0405
ILE 4700.0094
LYS 2030.0403
SER 2040.0252
PRO 2050.0165
PRO 2060.0132
ILE 2070.0128
LEU 2080.0117
PRO 2090.0064
PRO 2100.0095
HIS 2110.0087
LEU 2120.0037
LEU 2130.0071
GLN 2140.0071
VAL 2150.0041
ILE 2160.0057
LEU 2170.0089
ASN 2180.0148
LYS 2190.0131
ASP 2200.0179
THR 2210.0173
ASN 2220.0139
ILE 2230.0109
SER 2240.0131
CYS 2250.0142
ASP 2260.0125
PRO 2270.0117
ALA 2280.0098
LEU 2290.0133
LEU 2300.0111
PRO 2310.0053
GLU 2320.0075
PRO 2330.0134
ASN 2340.0123
HIS 2350.0097
VAL 2360.0098
MET 2370.0090
LEU 2380.0091
ASN 2390.0064
HIS 2400.0051
LEU 2410.0044
TYR 2420.0030
ALA 2430.0045
LEU 2440.0083
SER 2450.0138
ILE 2460.0088
LYS 2470.0146
ASP 2480.0140
SER 2490.0158
VAL 2500.0052
MET 2510.0060
VAL 2520.0074
LEU 2530.0071
SER 2540.0077
ALA 2550.0075
THR 2560.0088
HIS 2570.0113
ARG 2580.0114
TYR 2590.0314
LYS 2600.0222
LYS 2610.0173
LYS 2620.0351
TYR 2630.0151
VAL 2640.0119
THR 2650.0113
THR 2660.0081
LEU 2670.0085
LEU 2680.0093
TYR 2690.0108
LYS 2700.0093
PRO 2710.0090
PRO 5280.0037
GLY 5290.0038
SER 5300.0092
HIS 5310.0072
THR 5320.0055
ILE 5330.0059
GLU 5340.0049
PHE 5350.0044
PHE 5360.0044
GLU 5370.0022
MET 5380.0024
CYS 5390.0023
ALA 5400.0037
ASN 5410.0048
LEU 5420.0034
ILE 5430.0039
LYS 5440.0094
ILE 5450.0032
LEU 5460.0081
ALA 5470.0187
GLN 5480.0269

If you find results from this site helpful for your research, please cite one of our papers:

elNémo is maintained by Yves-Henri Sanejouand.
It was developed by Karsten Suhre.
Between 2003 and 2014, it was hosted by IGS (Marseille).
Between 2015 and 2025, it was hosted by US2B (Nantes).
Last modification: april 24th, 2026.