CNRS Nantes University US2B US2B
home |  start a new run |  job status |  references&downloads |  examples |  help  

Should you encounter any unexpected behaviour,
please let us know.
 elNémo has been relocated.
**Some cleaning from time to time**
Sorry for the inconvenience.


***  Apo AMPK  ***

<R2> analysis for 260711175133601569

---  normal mode 91  ---

This page gives a visualization of the normalized mean square displacement <R2> of all C-alpha atoms in the protein that are associated to this mode (black bars). The three components of the corresponding eigenvector are shown on the left (colored bars). Here is the raw data for <R2> and for the eigenvector (shift-click on the links for download).

XYZresidue<R2><R2>max = 0.0593
ARG 100.0081
VAL 110.0079
LYS 120.0089
ILE 130.0077
GLY 140.0134
HIS 150.0089
TYR 160.0034
ILE 170.0028
LEU 180.0021
GLY 190.0141
ASP 200.0235
THR 210.0231
LEU 220.0132
GLY 230.0089
VAL 240.0098
GLY 250.0092
THR 260.0090
PHE 270.0090
GLY 280.0153
LYS 290.0128
VAL 300.0083
LYS 310.0082
VAL 320.0063
GLY 330.0041
LYS 340.0029
HIS 350.0023
GLU 360.0076
LEU 370.0103
THR 380.0155
GLY 390.0130
HIS 400.0065
LYS 410.0053
VAL 420.0058
ALA 430.0024
VAL 440.0042
LYS 450.0048
ILE 460.0065
LEU 470.0042
ASN 480.0030
ARG 490.0043
GLN 500.0076
LYS 510.0042
ILE 520.0023
ARG 530.0069
SER 540.0068
LEU 550.0036
ASP 560.0075
VAL 570.0033
VAL 580.0119
GLY 590.0127
LYS 600.0120
ILE 610.0110
ARG 620.0126
ARG 630.0127
GLU 640.0111
ILE 650.0112
GLN 660.0110
ASN 670.0095
LEU 680.0090
LYS 690.0086
LEU 700.0070
PHE 710.0070
ARG 720.0069
HIS 730.0043
PRO 740.0043
HIS 750.0039
ILE 760.0045
ILE 770.0038
LYS 780.0047
LEU 790.0040
TYR 800.0042
GLN 810.0050
VAL 820.0042
ILE 830.0038
SER 840.0036
THR 850.0030
PRO 860.0024
SER 870.0040
ASP 880.0030
ILE 890.0030
PHE 900.0047
MET 910.0038
VAL 920.0038
MET 930.0033
GLU 940.0017
TYR 950.0040
VAL 960.0055
SER 970.0070
GLY 980.0070
GLY 990.0054
GLU 1000.0048
LEU 1010.0062
PHE 1020.0068
ASP 1030.0091
TYR 1040.0069
ILE 1050.0082
CYS 1060.0148
LYS 1070.0103
ASN 1080.0035
GLY 1090.0094
ARG 1100.0083
LEU 1110.0078
ASP 1120.0113
GLU 1130.0092
LYS 1140.0091
GLU 1150.0071
SER 1160.0071
ARG 1170.0066
ARG 1180.0049
LEU 1190.0045
PHE 1200.0039
GLN 1210.0030
GLN 1220.0027
ILE 1230.0027
LEU 1240.0014
SER 1250.0009
GLY 1260.0012
VAL 1270.0026
ASP 1280.0025
TYR 1290.0018
CYS 1300.0011
HIS 1310.0023
ARG 1320.0041
HIS 1330.0048
MET 1340.0079
VAL 1350.0023
VAL 1360.0035
HIS 1370.0065
ARG 1380.0097
ASP 1390.0077
LEU 1400.0064
LYS 1410.0061
PRO 1420.0046
GLU 1430.0028
ASN 1440.0038
VAL 1450.0042
LEU 1460.0036
LEU 1470.0055
ASP 1480.0064
ALA 1490.0159
HIS 1500.0159
MET 1510.0081
ASN 1520.0050
ALA 1530.0047
LYS 1540.0035
ILE 1550.0039
ALA 1560.0034
ASP 1570.0080
PHE 1580.0090
GLY 1590.0102
LEU 1600.0115
SER 1610.0091
ASN 1620.0068
MET 1630.0083
MET 1640.0091
SER 1650.0178
ASP 1660.0243
GLY 1670.0227
GLU 1680.0163
PHE 1690.0076
LEU 1700.0054
ARG 1710.0146
SER 1730.0181
CYS 1740.0143
GLY 1750.0101
SER 1760.0082
PRO 1770.0067
ASN 1780.0048
TYR 1790.0062
ALA 1800.0100
ALA 1810.0118
PRO 1820.0174
GLU 1830.0170
VAL 1840.0163
ILE 1850.0190
SER 1860.0255
GLY 1870.0273
ARG 1880.0231
LEU 1890.0103
TYR 1900.0097
ALA 1910.0088
GLY 1920.0047
PRO 1930.0083
GLU 1940.0102
VAL 1950.0106
ASP 1960.0091
ILE 1970.0083
TRP 1980.0084
SER 1990.0082
SER 2000.0067
GLY 2010.0045
VAL 2020.0040
ILE 2030.0068
LEU 2040.0048
TYR 2050.0071
ALA 2060.0079
LEU 2070.0057
LEU 2080.0077
CYS 2090.0088
GLY 2100.0080
THR 2110.0119
LEU 2120.0111
PRO 2130.0092
PHE 2140.0075
ASP 2150.0050
ASP 2160.0090
ASP 2170.0235
HIS 2180.0080
VAL 2190.0114
PRO 2200.0133
THR 2210.0078
LEU 2220.0058
PHE 2230.0046
LYS 2240.0053
LYS 2250.0064
ILE 2260.0057
CYS 2270.0096
ASP 2280.0110
GLY 2290.0142
ILE 2300.0380
PHE 2310.0326
TYR 2320.0586
THR 2330.0125
PRO 2340.0158
GLN 2350.0407
TYR 2360.0152
LEU 2370.0129
ASN 2380.0156
PRO 2390.0157
SER 2400.0137
VAL 2410.0107
ILE 2420.0095
SER 2430.0091
LEU 2440.0078
LEU 2450.0056
LYS 2460.0056
HIS 2470.0066
MET 2480.0073
LEU 2490.0086
GLN 2500.0094
VAL 2510.0139
ASP 2520.0124
PRO 2530.0101
MET 2540.0103
LYS 2550.0123
ARG 2560.0112
ALA 2570.0098
THR 2580.0090
ILE 2590.0060
LYS 2600.0062
ASP 2610.0073
ILE 2620.0039
ARG 2630.0059
GLU 2640.0087
HIS 2650.0067
GLU 2660.0069
TRP 2670.0057
PHE 2680.0059
LYS 2690.0077
GLN 2700.0083
ASP 2710.0117
LEU 2720.0044
PRO 2730.0033
LYS 2740.0073
TYR 2750.0027
LEU 2760.0017
PHE 2770.0034
PRO 2780.0197
GLU 2790.0092
ASP 2800.0133
ALA 3210.0131
VAL 3220.0117
ALA 3230.0193
TYR 3240.0150
HIS 3250.0136
LEU 3260.0043
ILE 3270.0067
ILE 3280.0111
ASP 3290.0086
ASN 3300.0142
ARG 3310.0195
ARG 3320.0139
ILE 3330.0087
MET 3340.0133
ASN 3350.0156
GLU 3360.0126
ALA 3370.0181
LYS 3380.0145
ASP 3390.0192
PHE 3400.0280
TYR 3410.0238
LEU 3420.0158
ALA 3430.0123
THR 3440.0088
SER 3450.0082
PRO 3460.0140
PRO 3470.0160
ASP 3480.0102
SER 3490.0129
PHE 3500.0031
LEU 3510.0055
ASP 3520.0072
ASP 3530.0072
HIS 3540.0104
HIS 3550.0104
LEU 3560.0091
THR 3570.0107
ARG 3580.0087
PRO 3590.0070
HIS 3600.0069
PRO 3610.0093
GLU 3620.0078
ARG 3630.0027
VAL 3640.0023
PRO 3650.0041
PHE 3660.0113
LEU 3670.0177
VAL 3680.0232
ALA 3690.0181
GLU 3700.0095
THR 3710.0336
PRO 3720.0326
ARG 3730.0136
ALA 3740.0162
ALA 3940.0253
LYS 3950.0191
TRP 3960.0113
HIS 3970.0122
LEU 3980.0132
GLY 3990.0122
ILE 4000.0103
ARG 4010.0089
SER 4020.0091
GLN 4030.0177
SER 4040.0234
ARG 4050.0253
PRO 4060.0133
ASN 4070.0117
ASP 4080.0173
ILE 4090.0134
MET 4100.0149
ALA 4110.0124
GLU 4120.0084
VAL 4130.0050
CYS 4140.0089
ARG 4150.0116
ALA 4160.0075
ILE 4170.0073
LYS 4180.0150
GLN 4190.0182
LEU 4200.0177
ASP 4210.0168
TYR 4220.0104
GLU 4230.0093
TRP 4240.0100
LYS 4250.0155
VAL 4260.0210
VAL 4270.0269
ASN 4280.0244
PRO 4290.0287
TYR 4300.0209
TYR 4310.0204
LEU 4320.0210
ARG 4330.0156
VAL 4340.0120
ARG 4350.0129
ARG 4360.0182
LYS 4370.0183
ASN 4380.0127
PRO 4390.0205
VAL 4400.0203
THR 4410.0168
SER 4420.0155
THR 4430.0171
PHE 4440.0179
SER 4450.0122
LYS 4460.0102
MET 4470.0115
SER 4480.0128
LEU 4490.0140
GLN 4500.0145
LEU 4510.0147
TYR 4520.0093
GLN 4530.0072
VAL 4540.0198
ASP 4550.0256
SER 4560.0321
ARG 4570.0191
THR 4580.0151
TYR 4590.0124
LEU 4600.0101
LEU 4610.0119
ASP 4620.0128
PHE 4630.0097
ARG 4640.0087
SER 4650.0066
ILE 4660.0107
ASP 4670.0139
ASP 4680.0133
GLU 4690.0216
ILE 4700.0250
LYS 2030.0593
SER 2040.0303
PRO 2050.0123
PRO 2060.0075
ILE 2070.0092
LEU 2080.0129
PRO 2090.0116
PRO 2100.0171
HIS 2110.0167
LEU 2120.0190
LEU 2130.0205
GLN 2140.0251
VAL 2150.0197
ILE 2160.0183
LEU 2170.0129
ASN 2180.0186
LYS 2190.0202
ASP 2200.0190
THR 2210.0137
ASN 2220.0092
ILE 2230.0052
SER 2240.0050
CYS 2250.0062
ASP 2260.0088
PRO 2270.0116
ALA 2280.0113
LEU 2290.0094
LEU 2300.0134
PRO 2310.0098
GLU 2320.0147
PRO 2330.0171
ASN 2340.0208
HIS 2350.0204
VAL 2360.0220
MET 2370.0205
LEU 2380.0205
ASN 2390.0119
HIS 2400.0112
LEU 2410.0080
TYR 2420.0117
ALA 2430.0078
LEU 2440.0064
SER 2450.0305
ILE 2460.0188
LYS 2470.0176
ASP 2480.0237
SER 2490.0076
VAL 2500.0178
MET 2510.0172
VAL 2520.0134
LEU 2530.0125
SER 2540.0073
ALA 2550.0100
THR 2560.0104
HIS 2570.0038
ARG 2580.0091
TYR 2590.0377
LYS 2600.0320
LYS 2610.0298
LYS 2620.0386
TYR 2630.0093
VAL 2640.0067
THR 2650.0040
THR 2660.0076
LEU 2670.0088
LEU 2680.0119
TYR 2690.0172
LYS 2700.0195
PRO 2710.0242
PRO 5280.0132
GLY 5290.0082
SER 5300.0138
HIS 5310.0115
THR 5320.0122
ILE 5330.0116
GLU 5340.0099
PHE 5350.0093
PHE 5360.0092
GLU 5370.0106
MET 5380.0101
CYS 5390.0110
ALA 5400.0123
ASN 5410.0110
LEU 5420.0094
ILE 5430.0093
LYS 5440.0112
ILE 5450.0067
LEU 5460.0060
ALA 5470.0092
GLN 5480.0085

If you find results from this site helpful for your research, please cite one of our papers:

elNémo is maintained by Yves-Henri Sanejouand.
It was developed by Karsten Suhre.
Between 2003 and 2014, it was hosted by IGS (Marseille).
Between 2015 and 2025, it was hosted by US2B (Nantes).
Last modification: april 24th, 2026.