CNRS Nantes University US2B US2B
home |  start a new run |  job status |  references&downloads |  examples |  help  

Should you encounter any unexpected behaviour,
please let us know.
 elNémo has been relocated.
**Some cleaning from time to time**
Sorry for the inconvenience.


***  Apo AMPK  ***

<R2> analysis for 260711175133601569

---  normal mode 93  ---

This page gives a visualization of the normalized mean square displacement <R2> of all C-alpha atoms in the protein that are associated to this mode (black bars). The three components of the corresponding eigenvector are shown on the left (colored bars). Here is the raw data for <R2> and for the eigenvector (shift-click on the links for download).

XYZresidue<R2><R2>max = 0.0577
ARG 100.0181
VAL 110.0161
LYS 120.0154
ILE 130.0120
GLY 140.0203
HIS 150.0182
TYR 160.0128
ILE 170.0110
LEU 180.0093
GLY 190.0154
ASP 200.0364
THR 210.0381
LEU 220.0217
GLY 230.0156
VAL 240.0224
GLY 250.0201
THR 260.0191
PHE 270.0218
GLY 280.0314
LYS 290.0260
VAL 300.0149
LYS 310.0112
VAL 320.0058
GLY 330.0072
LYS 340.0154
HIS 350.0147
GLU 360.0150
LEU 370.0196
THR 380.0253
GLY 390.0255
HIS 400.0120
LYS 410.0119
VAL 420.0093
ALA 430.0057
VAL 440.0066
LYS 450.0104
ILE 460.0179
LEU 470.0152
ASN 480.0138
ARG 490.0084
GLN 500.0112
LYS 510.0121
ILE 520.0209
ARG 530.0312
SER 540.0266
LEU 550.0297
ASP 560.0362
VAL 570.0367
VAL 580.0283
GLY 590.0259
LYS 600.0234
ILE 610.0191
ARG 620.0196
ARG 630.0128
GLU 640.0089
ILE 650.0091
GLN 660.0058
ASN 670.0078
LEU 680.0100
LYS 690.0121
LEU 700.0187
PHE 710.0153
ARG 720.0174
HIS 730.0115
PRO 740.0129
HIS 750.0131
ILE 760.0138
ILE 770.0142
LYS 780.0157
LEU 790.0133
TYR 800.0154
GLN 810.0149
VAL 820.0117
ILE 830.0088
SER 840.0088
THR 850.0086
PRO 860.0114
SER 870.0135
ASP 880.0091
ILE 890.0071
PHE 900.0087
MET 910.0099
VAL 920.0090
MET 930.0100
GLU 940.0126
TYR 950.0130
VAL 960.0148
SER 970.0226
GLY 980.0185
GLY 990.0165
GLU 1000.0038
LEU 1010.0051
PHE 1020.0089
ASP 1030.0078
TYR 1040.0063
ILE 1050.0089
CYS 1060.0152
LYS 1070.0155
ASN 1080.0146
GLY 1090.0155
ARG 1100.0115
LEU 1110.0083
ASP 1120.0031
GLU 1130.0050
LYS 1140.0062
GLU 1150.0033
SER 1160.0069
ARG 1170.0057
ARG 1180.0086
LEU 1190.0085
PHE 1200.0084
GLN 1210.0084
GLN 1220.0080
ILE 1230.0093
LEU 1240.0103
SER 1250.0079
GLY 1260.0097
VAL 1270.0085
ASP 1280.0057
TYR 1290.0082
CYS 1300.0092
HIS 1310.0062
ARG 1320.0070
HIS 1330.0115
MET 1340.0094
VAL 1350.0065
VAL 1360.0055
HIS 1370.0037
ARG 1380.0008
ASP 1390.0046
LEU 1400.0062
LYS 1410.0080
PRO 1420.0086
GLU 1430.0066
ASN 1440.0051
VAL 1450.0075
LEU 1460.0071
LEU 1470.0080
ASP 1480.0165
ALA 1490.0321
HIS 1500.0294
MET 1510.0124
ASN 1520.0135
ALA 1530.0114
LYS 1540.0107
ILE 1550.0096
ALA 1560.0086
ASP 1570.0053
PHE 1580.0028
GLY 1590.0028
LEU 1600.0025
SER 1610.0012
ASN 1620.0040
MET 1630.0081
MET 1640.0094
SER 1650.0132
ASP 1660.0104
GLY 1670.0108
GLU 1680.0113
PHE 1690.0118
LEU 1700.0116
ARG 1710.0116
SER 1730.0102
CYS 1740.0072
GLY 1750.0076
SER 1760.0119
PRO 1770.0125
ASN 1780.0127
TYR 1790.0083
ALA 1800.0080
ALA 1810.0083
PRO 1820.0112
GLU 1830.0094
VAL 1840.0098
ILE 1850.0128
SER 1860.0125
GLY 1870.0120
ARG 1880.0098
LEU 1890.0099
TYR 1900.0090
ALA 1910.0097
GLY 1920.0072
PRO 1930.0049
GLU 1940.0033
VAL 1950.0030
ASP 1960.0036
ILE 1970.0039
TRP 1980.0043
SER 1990.0039
SER 2000.0034
GLY 2010.0046
VAL 2020.0050
ILE 2030.0042
LEU 2040.0034
TYR 2050.0044
ALA 2060.0040
LEU 2070.0048
LEU 2080.0037
CYS 2090.0055
GLY 2100.0083
THR 2110.0065
LEU 2120.0064
PRO 2130.0071
PHE 2140.0070
ASP 2150.0138
ASP 2160.0142
ASP 2170.0160
HIS 2180.0177
VAL 2190.0271
PRO 2200.0312
THR 2210.0139
LEU 2220.0144
PHE 2230.0193
LYS 2240.0121
LYS 2250.0105
ILE 2260.0140
CYS 2270.0160
ASP 2280.0130
GLY 2290.0160
ILE 2300.0222
PHE 2310.0198
TYR 2320.0431
THR 2330.0155
PRO 2340.0166
GLN 2350.0299
TYR 2360.0232
LEU 2370.0158
ASN 2380.0154
PRO 2390.0145
SER 2400.0119
VAL 2410.0097
ILE 2420.0107
SER 2430.0086
LEU 2440.0080
LEU 2450.0057
LYS 2460.0053
HIS 2470.0043
MET 2480.0011
LEU 2490.0030
GLN 2500.0049
VAL 2510.0113
ASP 2520.0108
PRO 2530.0081
MET 2540.0068
LYS 2550.0058
ARG 2560.0044
ALA 2570.0030
THR 2580.0056
ILE 2590.0086
LYS 2600.0155
ASP 2610.0122
ILE 2620.0112
ARG 2630.0126
GLU 2640.0133
HIS 2650.0135
GLU 2660.0156
TRP 2670.0122
PHE 2680.0101
LYS 2690.0106
GLN 2700.0108
ASP 2710.0106
LEU 2720.0116
PRO 2730.0083
LYS 2740.0095
TYR 2750.0098
LEU 2760.0084
PHE 2770.0094
PRO 2780.0267
GLU 2790.0077
ASP 2800.0148
ALA 3210.0262
VAL 3220.0215
ALA 3230.0283
TYR 3240.0546
HIS 3250.0377
LEU 3260.0057
ILE 3270.0302
ILE 3280.0494
ASP 3290.0366
ASN 3300.0216
ARG 3310.0405
ARG 3320.0230
ILE 3330.0170
MET 3340.0243
ASN 3350.0245
GLU 3360.0214
ALA 3370.0137
LYS 3380.0207
ASP 3390.0104
PHE 3400.0145
TYR 3410.0277
LEU 3420.0124
ALA 3430.0067
THR 3440.0136
SER 3450.0130
PRO 3460.0061
PRO 3470.0164
ASP 3480.0203
SER 3490.0144
PHE 3500.0095
LEU 3510.0214
ASP 3520.0193
ASP 3530.0290
HIS 3540.0219
HIS 3550.0204
LEU 3560.0225
THR 3570.0136
ARG 3580.0075
PRO 3590.0065
HIS 3600.0061
PRO 3610.0052
GLU 3620.0096
ARG 3630.0130
VAL 3640.0108
PRO 3650.0187
PHE 3660.0190
LEU 3670.0076
VAL 3680.0074
ALA 3690.0143
GLU 3700.0178
THR 3710.0143
PRO 3720.0141
ARG 3730.0061
ALA 3740.0159
ALA 3940.0577
LYS 3950.0445
TRP 3960.0264
HIS 3970.0140
LEU 3980.0077
GLY 3990.0075
ILE 4000.0088
ARG 4010.0078
SER 4020.0086
GLN 4030.0156
SER 4040.0046
ARG 4050.0111
PRO 4060.0063
ASN 4070.0118
ASP 4080.0129
ILE 4090.0103
MET 4100.0108
ALA 4110.0139
GLU 4120.0142
VAL 4130.0136
CYS 4140.0134
ARG 4150.0149
ALA 4160.0173
ILE 4170.0151
LYS 4180.0140
GLN 4190.0178
LEU 4200.0186
ASP 4210.0174
TYR 4220.0120
GLU 4230.0099
TRP 4240.0097
LYS 4250.0144
VAL 4260.0183
VAL 4270.0146
ASN 4280.0196
PRO 4290.0213
TYR 4300.0111
TYR 4310.0102
LEU 4320.0085
ARG 4330.0069
VAL 4340.0067
ARG 4350.0077
ARG 4360.0082
LYS 4370.0053
ASN 4380.0024
PRO 4390.0108
VAL 4400.0152
THR 4410.0073
SER 4420.0029
THR 4430.0035
PHE 4440.0060
SER 4450.0050
LYS 4460.0057
MET 4470.0067
SER 4480.0063
LEU 4490.0062
GLN 4500.0087
LEU 4510.0079
TYR 4520.0089
GLN 4530.0096
VAL 4540.0080
ASP 4550.0055
SER 4560.0086
ARG 4570.0099
THR 4580.0091
TYR 4590.0078
LEU 4600.0042
LEU 4610.0048
ASP 4620.0054
PHE 4630.0049
ARG 4640.0049
SER 4650.0046
ILE 4660.0078
ASP 4670.0094
ASP 4680.0084
GLU 4690.0124
ILE 4700.0076
LYS 2030.0452
SER 2040.0268
PRO 2050.0155
PRO 2060.0120
ILE 2070.0128
LEU 2080.0120
PRO 2090.0098
PRO 2100.0101
HIS 2110.0101
LEU 2120.0068
LEU 2130.0080
GLN 2140.0090
VAL 2150.0069
ILE 2160.0021
LEU 2170.0092
ASN 2180.0126
LYS 2190.0089
ASP 2200.0081
THR 2210.0090
ASN 2220.0098
ILE 2230.0101
SER 2240.0113
CYS 2250.0109
ASP 2260.0094
PRO 2270.0096
ALA 2280.0050
LEU 2290.0056
LEU 2300.0018
PRO 2310.0049
GLU 2320.0071
PRO 2330.0058
ASN 2340.0072
HIS 2350.0077
VAL 2360.0086
MET 2370.0062
LEU 2380.0063
ASN 2390.0048
HIS 2400.0028
LEU 2410.0022
TYR 2420.0056
ALA 2430.0124
LEU 2440.0220
SER 2450.0200
ILE 2460.0125
LYS 2470.0140
ASP 2480.0174
SER 2490.0137
VAL 2500.0140
MET 2510.0105
VAL 2520.0135
LEU 2530.0109
SER 2540.0075
ALA 2550.0030
THR 2560.0042
HIS 2570.0060
ARG 2580.0052
TYR 2590.0078
LYS 2600.0182
LYS 2610.0154
LYS 2620.0145
TYR 2630.0046
VAL 2640.0035
THR 2650.0035
THR 2660.0116
LEU 2670.0141
LEU 2680.0128
TYR 2690.0124
LYS 2700.0033
PRO 2710.0108
PRO 5280.0079
GLY 5290.0059
SER 5300.0086
HIS 5310.0048
THR 5320.0039
ILE 5330.0050
GLU 5340.0007
PHE 5350.0017
PHE 5360.0024
GLU 5370.0066
MET 5380.0076
CYS 5390.0088
ALA 5400.0150
ASN 5410.0165
LEU 5420.0166
ILE 5430.0141
LYS 5440.0128
ILE 5450.0128
LEU 5460.0121
ALA 5470.0344
GLN 5480.0567

If you find results from this site helpful for your research, please cite one of our papers:

elNémo is maintained by Yves-Henri Sanejouand.
It was developed by Karsten Suhre.
Between 2003 and 2014, it was hosted by IGS (Marseille).
Between 2015 and 2025, it was hosted by US2B (Nantes).
Last modification: april 24th, 2026.