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***  Apo AMPK  ***

<R2> analysis for 260711175133601569

---  normal mode 95  ---

This page gives a visualization of the normalized mean square displacement <R2> of all C-alpha atoms in the protein that are associated to this mode (black bars). The three components of the corresponding eigenvector are shown on the left (colored bars). Here is the raw data for <R2> and for the eigenvector (shift-click on the links for download).

XYZresidue<R2><R2>max = 0.0703
ARG 100.0248
VAL 110.0257
LYS 120.0173
ILE 130.0153
GLY 140.0062
HIS 150.0024
TYR 160.0095
ILE 170.0106
LEU 180.0156
GLY 190.0322
ASP 200.0216
THR 210.0109
LEU 220.0184
GLY 230.0374
VAL 240.0703
GLY 250.0251
THR 260.0175
PHE 270.0126
GLY 280.0155
LYS 290.0198
VAL 300.0081
LYS 310.0079
VAL 320.0116
GLY 330.0135
LYS 340.0121
HIS 350.0073
GLU 360.0073
LEU 370.0248
THR 380.0206
GLY 390.0083
HIS 400.0109
LYS 410.0126
VAL 420.0118
ALA 430.0092
VAL 440.0079
LYS 450.0057
ILE 460.0083
LEU 470.0077
ASN 480.0083
ARG 490.0060
GLN 500.0036
LYS 510.0067
ILE 520.0074
ARG 530.0192
SER 540.0267
LEU 550.0092
ASP 560.0144
VAL 570.0217
VAL 580.0153
GLY 590.0199
LYS 600.0247
ILE 610.0126
ARG 620.0111
ARG 630.0079
GLU 640.0083
ILE 650.0092
GLN 660.0061
ASN 670.0078
LEU 680.0094
LYS 690.0163
LEU 700.0234
PHE 710.0180
ARG 720.0193
HIS 730.0119
PRO 740.0086
HIS 750.0073
ILE 760.0030
ILE 770.0044
LYS 780.0080
LEU 790.0084
TYR 800.0054
GLN 810.0045
VAL 820.0074
ILE 830.0083
SER 840.0071
THR 850.0211
PRO 860.0314
SER 870.0196
ASP 880.0074
ILE 890.0072
PHE 900.0124
MET 910.0060
VAL 920.0058
MET 930.0070
GLU 940.0065
TYR 950.0060
VAL 960.0051
SER 970.0077
GLY 980.0085
GLY 990.0065
GLU 1000.0065
LEU 1010.0062
PHE 1020.0068
ASP 1030.0080
TYR 1040.0066
ILE 1050.0062
CYS 1060.0086
LYS 1070.0062
ASN 1080.0048
GLY 1090.0054
ARG 1100.0044
LEU 1110.0036
ASP 1120.0071
GLU 1130.0036
LYS 1140.0067
GLU 1150.0055
SER 1160.0043
ARG 1170.0046
ARG 1180.0065
LEU 1190.0050
PHE 1200.0039
GLN 1210.0075
GLN 1220.0075
ILE 1230.0071
LEU 1240.0106
SER 1250.0103
GLY 1260.0123
VAL 1270.0115
ASP 1280.0160
TYR 1290.0158
CYS 1300.0130
HIS 1310.0152
ARG 1320.0195
HIS 1330.0172
MET 1340.0131
VAL 1350.0090
VAL 1360.0074
HIS 1370.0038
ARG 1380.0040
ASP 1390.0045
LEU 1400.0022
LYS 1410.0042
PRO 1420.0051
GLU 1430.0053
ASN 1440.0046
VAL 1450.0038
LEU 1460.0041
LEU 1470.0046
ASP 1480.0046
ALA 1490.0069
HIS 1500.0124
MET 1510.0060
ASN 1520.0053
ALA 1530.0039
LYS 1540.0017
ILE 1550.0017
ALA 1560.0021
ASP 1570.0080
PHE 1580.0059
GLY 1590.0062
LEU 1600.0051
SER 1610.0019
ASN 1620.0044
MET 1630.0060
MET 1640.0106
SER 1650.0126
ASP 1660.0130
GLY 1670.0133
GLU 1680.0125
PHE 1690.0142
LEU 1700.0140
ARG 1710.0109
SER 1730.0125
CYS 1740.0102
GLY 1750.0079
SER 1760.0088
PRO 1770.0082
ASN 1780.0076
TYR 1790.0064
ALA 1800.0074
ALA 1810.0078
PRO 1820.0078
GLU 1830.0104
VAL 1840.0096
ILE 1850.0090
SER 1860.0103
GLY 1870.0115
ARG 1880.0097
LEU 1890.0111
TYR 1900.0114
ALA 1910.0151
GLY 1920.0107
PRO 1930.0113
GLU 1940.0101
VAL 1950.0076
ASP 1960.0062
ILE 1970.0070
TRP 1980.0056
SER 1990.0060
SER 2000.0072
GLY 2010.0058
VAL 2020.0058
ILE 2030.0066
LEU 2040.0066
TYR 2050.0062
ALA 2060.0062
LEU 2070.0053
LEU 2080.0056
CYS 2090.0082
GLY 2100.0083
THR 2110.0087
LEU 2120.0086
PRO 2130.0087
PHE 2140.0083
ASP 2150.0084
ASP 2160.0081
ASP 2170.0076
HIS 2180.0112
VAL 2190.0069
PRO 2200.0129
THR 2210.0117
LEU 2220.0092
PHE 2230.0112
LYS 2240.0096
LYS 2250.0102
ILE 2260.0103
CYS 2270.0076
ASP 2280.0082
GLY 2290.0087
ILE 2300.0074
PHE 2310.0108
TYR 2320.0136
THR 2330.0106
PRO 2340.0193
GLN 2350.0243
TYR 2360.0187
LEU 2370.0140
ASN 2380.0134
PRO 2390.0115
SER 2400.0099
VAL 2410.0087
ILE 2420.0090
SER 2430.0093
LEU 2440.0084
LEU 2450.0091
LYS 2460.0070
HIS 2470.0088
MET 2480.0083
LEU 2490.0078
GLN 2500.0097
VAL 2510.0094
ASP 2520.0135
PRO 2530.0122
MET 2540.0137
LYS 2550.0145
ARG 2560.0109
ALA 2570.0115
THR 2580.0080
ILE 2590.0081
LYS 2600.0109
ASP 2610.0093
ILE 2620.0082
ARG 2630.0067
GLU 2640.0082
HIS 2650.0084
GLU 2660.0079
TRP 2670.0052
PHE 2680.0046
LYS 2690.0080
GLN 2700.0081
ASP 2710.0108
LEU 2720.0106
PRO 2730.0154
LYS 2740.0173
TYR 2750.0167
LEU 2760.0153
PHE 2770.0144
PRO 2780.0199
GLU 2790.0199
ASP 2800.0238
ALA 3210.0399
VAL 3220.0329
ALA 3230.0327
TYR 3240.0163
HIS 3250.0451
LEU 3260.0415
ILE 3270.0146
ILE 3280.0216
ASP 3290.0360
ASN 3300.0534
ARG 3310.0187
ARG 3320.0367
ILE 3330.0551
MET 3340.0323
ASN 3350.0231
GLU 3360.0276
ALA 3370.0171
LYS 3380.0380
ASP 3390.0396
PHE 3400.0332
TYR 3410.0294
LEU 3420.0182
ALA 3430.0071
THR 3440.0154
SER 3450.0350
PRO 3460.0140
PRO 3470.0166
ASP 3480.0319
SER 3490.0194
PHE 3500.0178
LEU 3510.0318
ASP 3520.0270
ASP 3530.0413
HIS 3540.0233
HIS 3550.0227
LEU 3560.0306
THR 3570.0356
ARG 3580.0232
PRO 3590.0095
HIS 3600.0036
PRO 3610.0123
GLU 3620.0119
ARG 3630.0110
VAL 3640.0105
PRO 3650.0129
PHE 3660.0128
LEU 3670.0102
VAL 3680.0182
ALA 3690.0155
GLU 3700.0177
THR 3710.0323
PRO 3720.0287
ARG 3730.0184
ALA 3740.0069
ALA 3940.0133
LYS 3950.0099
TRP 3960.0059
HIS 3970.0044
LEU 3980.0037
GLY 3990.0049
ILE 4000.0061
ARG 4010.0065
SER 4020.0095
GLN 4030.0145
SER 4040.0095
ARG 4050.0093
PRO 4060.0055
ASN 4070.0141
ASP 4080.0180
ILE 4090.0087
MET 4100.0122
ALA 4110.0174
GLU 4120.0100
VAL 4130.0071
CYS 4140.0175
ARG 4150.0173
ALA 4160.0132
ILE 4170.0187
LYS 4180.0278
GLN 4190.0292
LEU 4200.0294
ASP 4210.0269
TYR 4220.0157
GLU 4230.0102
TRP 4240.0083
LYS 4250.0071
VAL 4260.0098
VAL 4270.0030
ASN 4280.0127
PRO 4290.0200
TYR 4300.0114
TYR 4310.0076
LEU 4320.0064
ARG 4330.0022
VAL 4340.0046
ARG 4350.0043
ARG 4360.0089
LYS 4370.0044
ASN 4380.0037
PRO 4390.0092
VAL 4400.0075
THR 4410.0090
SER 4420.0045
THR 4430.0053
PHE 4440.0069
SER 4450.0071
LYS 4460.0057
MET 4470.0052
SER 4480.0041
LEU 4490.0041
GLN 4500.0047
LEU 4510.0087
TYR 4520.0081
GLN 4530.0105
VAL 4540.0133
ASP 4550.0227
SER 4560.0336
ARG 4570.0178
THR 4580.0117
TYR 4590.0091
LEU 4600.0047
LEU 4610.0049
ASP 4620.0043
PHE 4630.0031
ARG 4640.0044
SER 4650.0061
ILE 4660.0100
ASP 4670.0130
ASP 4680.0141
GLU 4690.0327
ILE 4700.0212
LYS 2030.0491
SER 2040.0265
PRO 2050.0167
PRO 2060.0104
ILE 2070.0093
LEU 2080.0069
PRO 2090.0062
PRO 2100.0059
HIS 2110.0091
LEU 2120.0068
LEU 2130.0051
GLN 2140.0071
VAL 2150.0055
ILE 2160.0044
LEU 2170.0017
ASN 2180.0033
LYS 2190.0115
ASP 2200.0232
THR 2210.0285
ASN 2220.0219
ILE 2230.0167
SER 2240.0078
CYS 2250.0102
ASP 2260.0269
PRO 2270.0368
ALA 2280.0457
LEU 2290.0239
LEU 2300.0098
PRO 2310.0074
GLU 2320.0071
PRO 2330.0070
ASN 2340.0085
HIS 2350.0105
VAL 2360.0107
MET 2370.0085
LEU 2380.0095
ASN 2390.0076
HIS 2400.0062
LEU 2410.0051
TYR 2420.0061
ALA 2430.0068
LEU 2440.0076
SER 2450.0163
ILE 2460.0129
LYS 2470.0057
ASP 2480.0118
SER 2490.0133
VAL 2500.0095
MET 2510.0076
VAL 2520.0076
LEU 2530.0068
SER 2540.0069
ALA 2550.0072
THR 2560.0076
HIS 2570.0093
ARG 2580.0112
TYR 2590.0157
LYS 2600.0041
LYS 2610.0105
LYS 2620.0157
TYR 2630.0109
VAL 2640.0102
THR 2650.0086
THR 2660.0082
LEU 2670.0091
LEU 2680.0096
TYR 2690.0125
LYS 2700.0125
PRO 2710.0146
PRO 5280.0108
GLY 5290.0060
SER 5300.0160
HIS 5310.0101
THR 5320.0085
ILE 5330.0102
GLU 5340.0067
PHE 5350.0049
PHE 5360.0057
GLU 5370.0020
MET 5380.0026
CYS 5390.0030
ALA 5400.0106
ASN 5410.0120
LEU 5420.0104
ILE 5430.0107
LYS 5440.0180
ILE 5450.0082
LEU 5460.0086
ALA 5470.0311
GLN 5480.0385

If you find results from this site helpful for your research, please cite one of our papers:

elNémo is maintained by Yves-Henri Sanejouand.
It was developed by Karsten Suhre.
Between 2003 and 2014, it was hosted by IGS (Marseille).
Between 2015 and 2025, it was hosted by US2B (Nantes).
Last modification: april 24th, 2026.