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***  Apo AMPK  ***

<R2> analysis for 260711175133601569

---  normal mode 96  ---

This page gives a visualization of the normalized mean square displacement <R2> of all C-alpha atoms in the protein that are associated to this mode (black bars). The three components of the corresponding eigenvector are shown on the left (colored bars). Here is the raw data for <R2> and for the eigenvector (shift-click on the links for download).

XYZresidue<R2><R2>max = 0.0781
ARG 100.0099
VAL 110.0073
LYS 120.0046
ILE 130.0046
GLY 140.0032
HIS 150.0047
TYR 160.0052
ILE 170.0046
LEU 180.0069
GLY 190.0084
ASP 200.0127
THR 210.0147
LEU 220.0135
GLY 230.0144
VAL 240.0145
GLY 250.0121
THR 260.0117
PHE 270.0103
GLY 280.0113
LYS 290.0108
VAL 300.0095
LYS 310.0072
VAL 320.0041
GLY 330.0027
LYS 340.0062
HIS 350.0060
GLU 360.0059
LEU 370.0087
THR 380.0092
GLY 390.0095
HIS 400.0067
LYS 410.0053
VAL 420.0068
ALA 430.0041
VAL 440.0050
LYS 450.0046
ILE 460.0067
LEU 470.0067
ASN 480.0067
ARG 490.0033
GLN 500.0061
LYS 510.0079
ILE 520.0071
ARG 530.0095
SER 540.0088
LEU 550.0117
ASP 560.0123
VAL 570.0102
VAL 580.0087
GLY 590.0066
LYS 600.0073
ILE 610.0113
ARG 620.0150
ARG 630.0110
GLU 640.0084
ILE 650.0122
GLN 660.0125
ASN 670.0099
LEU 680.0096
LYS 690.0114
LEU 700.0134
PHE 710.0113
ARG 720.0107
HIS 730.0162
PRO 740.0169
HIS 750.0173
ILE 760.0099
ILE 770.0087
LYS 780.0117
LEU 790.0123
TYR 800.0121
GLN 810.0119
VAL 820.0104
ILE 830.0093
SER 840.0093
THR 850.0151
PRO 860.0159
SER 870.0118
ASP 880.0086
ILE 890.0069
PHE 900.0073
MET 910.0074
VAL 920.0073
MET 930.0085
GLU 940.0128
TYR 950.0063
VAL 960.0094
SER 970.0222
GLY 980.0232
GLY 990.0258
GLU 1000.0257
LEU 1010.0218
PHE 1020.0269
ASP 1030.0364
TYR 1040.0276
ILE 1050.0272
CYS 1060.0377
LYS 1070.0442
ASN 1080.0380
GLY 1090.0162
ARG 1100.0159
LEU 1110.0174
ASP 1120.0182
GLU 1130.0180
LYS 1140.0259
GLU 1150.0243
SER 1160.0235
ARG 1170.0228
ARG 1180.0234
LEU 1190.0245
PHE 1200.0234
GLN 1210.0220
GLN 1220.0222
ILE 1230.0228
LEU 1240.0194
SER 1250.0149
GLY 1260.0154
VAL 1270.0190
ASP 1280.0174
TYR 1290.0146
CYS 1300.0169
HIS 1310.0186
ARG 1320.0174
HIS 1330.0134
MET 1340.0127
VAL 1350.0131
VAL 1360.0123
HIS 1370.0119
ARG 1380.0117
ASP 1390.0113
LEU 1400.0103
LYS 1410.0103
PRO 1420.0204
GLU 1430.0195
ASN 1440.0171
VAL 1450.0152
LEU 1460.0123
LEU 1470.0110
ASP 1480.0200
ALA 1490.0434
HIS 1500.0569
MET 1510.0243
ASN 1520.0173
ALA 1530.0137
LYS 1540.0057
ILE 1550.0059
ALA 1560.0064
ASP 1570.0070
PHE 1580.0059
GLY 1590.0060
LEU 1600.0118
SER 1610.0112
ASN 1620.0107
MET 1630.0099
MET 1640.0102
SER 1650.0088
ASP 1660.0074
GLY 1670.0061
GLU 1680.0064
PHE 1690.0087
LEU 1700.0124
ARG 1710.0133
SER 1730.0172
CYS 1740.0169
GLY 1750.0146
SER 1760.0132
PRO 1770.0106
ASN 1780.0104
TYR 1790.0113
ALA 1800.0114
ALA 1810.0127
PRO 1820.0121
GLU 1830.0115
VAL 1840.0150
ILE 1850.0171
SER 1860.0167
GLY 1870.0185
ARG 1880.0116
LEU 1890.0098
TYR 1900.0088
ALA 1910.0092
GLY 1920.0122
PRO 1930.0128
GLU 1940.0090
VAL 1950.0094
ASP 1960.0105
ILE 1970.0059
TRP 1980.0044
SER 1990.0063
SER 2000.0036
GLY 2010.0047
VAL 2020.0035
ILE 2030.0096
LEU 2040.0094
TYR 2050.0086
ALA 2060.0152
LEU 2070.0142
LEU 2080.0136
CYS 2090.0123
GLY 2100.0123
THR 2110.0141
LEU 2120.0096
PRO 2130.0090
PHE 2140.0057
ASP 2150.0132
ASP 2160.0093
ASP 2170.0111
HIS 2180.0082
VAL 2190.0042
PRO 2200.0106
THR 2210.0076
LEU 2220.0089
PHE 2230.0121
LYS 2240.0119
LYS 2250.0124
ILE 2260.0124
CYS 2270.0111
ASP 2280.0076
GLY 2290.0054
ILE 2300.0160
PHE 2310.0163
TYR 2320.0285
THR 2330.0064
PRO 2340.0302
GLN 2350.0554
TYR 2360.0184
LEU 2370.0106
ASN 2380.0098
PRO 2390.0083
SER 2400.0081
VAL 2410.0090
ILE 2420.0062
SER 2430.0064
LEU 2440.0091
LEU 2450.0065
LYS 2460.0068
HIS 2470.0084
MET 2480.0061
LEU 2490.0031
GLN 2500.0042
VAL 2510.0037
ASP 2520.0072
PRO 2530.0035
MET 2540.0101
LYS 2550.0132
ARG 2560.0093
ALA 2570.0126
THR 2580.0208
ILE 2590.0254
LYS 2600.0326
ASP 2610.0226
ILE 2620.0166
ARG 2630.0160
GLU 2640.0129
HIS 2650.0103
GLU 2660.0192
TRP 2670.0125
PHE 2680.0140
LYS 2690.0221
GLN 2700.0296
ASP 2710.0445
LEU 2720.0426
PRO 2730.0398
LYS 2740.0215
TYR 2750.0153
LEU 2760.0194
PHE 2770.0214
PRO 2780.0566
GLU 2790.0465
ASP 2800.0338
ALA 3210.0370
VAL 3220.0209
ALA 3230.0568
TYR 3240.0781
HIS 3250.0551
LEU 3260.0092
ILE 3270.0536
ILE 3280.0763
ASP 3290.0455
ASN 3300.0434
ARG 3310.0604
ARG 3320.0326
ILE 3330.0183
MET 3340.0186
ASN 3350.0198
GLU 3360.0152
ALA 3370.0203
LYS 3380.0258
ASP 3390.0183
PHE 3400.0209
TYR 3410.0209
LEU 3420.0119
ALA 3430.0086
THR 3440.0081
SER 3450.0083
PRO 3460.0091
PRO 3470.0095
ASP 3480.0074
SER 3490.0085
PHE 3500.0030
LEU 3510.0024
ASP 3520.0024
ASP 3530.0026
HIS 3540.0049
HIS 3550.0039
LEU 3560.0049
THR 3570.0102
ARG 3580.0058
PRO 3590.0073
HIS 3600.0053
PRO 3610.0066
GLU 3620.0056
ARG 3630.0033
VAL 3640.0042
PRO 3650.0042
PHE 3660.0064
LEU 3670.0059
VAL 3680.0070
ALA 3690.0079
GLU 3700.0059
THR 3710.0162
PRO 3720.0191
ARG 3730.0084
ALA 3740.0023
ALA 3940.0078
LYS 3950.0063
TRP 3960.0041
HIS 3970.0034
LEU 3980.0027
GLY 3990.0012
ILE 4000.0013
ARG 4010.0023
SER 4020.0031
GLN 4030.0042
SER 4040.0051
ARG 4050.0042
PRO 4060.0030
ASN 4070.0060
ASP 4080.0071
ILE 4090.0058
MET 4100.0066
ALA 4110.0072
GLU 4120.0076
VAL 4130.0076
CYS 4140.0077
ARG 4150.0073
ALA 4160.0077
ILE 4170.0064
LYS 4180.0070
GLN 4190.0079
LEU 4200.0064
ASP 4210.0052
TYR 4220.0025
GLU 4230.0022
TRP 4240.0038
LYS 4250.0058
VAL 4260.0075
VAL 4270.0078
ASN 4280.0080
PRO 4290.0077
TYR 4300.0057
TYR 4310.0060
LEU 4320.0062
ARG 4330.0057
VAL 4340.0044
ARG 4350.0033
ARG 4360.0031
LYS 4370.0032
ASN 4380.0019
PRO 4390.0081
VAL 4400.0056
THR 4410.0028
SER 4420.0018
THR 4430.0015
PHE 4440.0024
SER 4450.0023
LYS 4460.0036
MET 4470.0047
SER 4480.0043
LEU 4490.0039
GLN 4500.0035
LEU 4510.0010
TYR 4520.0013
GLN 4530.0021
VAL 4540.0051
ASP 4550.0074
SER 4560.0100
ARG 4570.0059
THR 4580.0040
TYR 4590.0018
LEU 4600.0012
LEU 4610.0012
ASP 4620.0016
PHE 4630.0031
ARG 4640.0032
SER 4650.0032
ILE 4660.0061
ASP 4670.0065
ASP 4680.0063
GLU 4690.0106
ILE 4700.0125
LYS 2030.0101
SER 2040.0053
PRO 2050.0024
PRO 2060.0052
ILE 2070.0054
LEU 2080.0030
PRO 2090.0025
PRO 2100.0020
HIS 2110.0021
LEU 2120.0008
LEU 2130.0027
GLN 2140.0031
VAL 2150.0017
ILE 2160.0015
LEU 2170.0017
ASN 2180.0036
LYS 2190.0026
ASP 2200.0067
THR 2210.0093
ASN 2220.0078
ILE 2230.0046
SER 2240.0062
CYS 2250.0060
ASP 2260.0071
PRO 2270.0091
ALA 2280.0086
LEU 2290.0080
LEU 2300.0030
PRO 2310.0047
GLU 2320.0079
PRO 2330.0052
ASN 2340.0044
HIS 2350.0052
VAL 2360.0044
MET 2370.0038
LEU 2380.0048
ASN 2390.0040
HIS 2400.0033
LEU 2410.0029
TYR 2420.0035
ALA 2430.0040
LEU 2440.0047
SER 2450.0102
ILE 2460.0102
LYS 2470.0132
ASP 2480.0130
SER 2490.0142
VAL 2500.0070
MET 2510.0048
VAL 2520.0051
LEU 2530.0054
SER 2540.0042
ALA 2550.0049
THR 2560.0049
HIS 2570.0062
ARG 2580.0093
TYR 2590.0169
LYS 2600.0047
LYS 2610.0083
LYS 2620.0142
TYR 2630.0085
VAL 2640.0082
THR 2650.0054
THR 2660.0063
LEU 2670.0057
LEU 2680.0059
TYR 2690.0055
LYS 2700.0053
PRO 2710.0050
PRO 5280.0058
GLY 5290.0041
SER 5300.0055
HIS 5310.0031
THR 5320.0049
ILE 5330.0058
GLU 5340.0040
PHE 5350.0038
PHE 5360.0052
GLU 5370.0039
MET 5380.0039
CYS 5390.0039
ALA 5400.0037
ASN 5410.0048
LEU 5420.0056
ILE 5430.0053
LYS 5440.0055
ILE 5450.0055
LEU 5460.0072
ALA 5470.0089
GLN 5480.0118

If you find results from this site helpful for your research, please cite one of our papers:

elNémo is maintained by Yves-Henri Sanejouand.
It was developed by Karsten Suhre.
Between 2003 and 2014, it was hosted by IGS (Marseille).
Between 2015 and 2025, it was hosted by US2B (Nantes).
Last modification: april 24th, 2026.