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***  Apo AMPK  ***

<R2> analysis for 260711175133601569

---  normal mode 98  ---

This page gives a visualization of the normalized mean square displacement <R2> of all C-alpha atoms in the protein that are associated to this mode (black bars). The three components of the corresponding eigenvector are shown on the left (colored bars). Here is the raw data for <R2> and for the eigenvector (shift-click on the links for download).

XYZresidue<R2><R2>max = 0.0524
ARG 100.0100
VAL 110.0148
LYS 120.0142
ILE 130.0161
GLY 140.0210
HIS 150.0151
TYR 160.0079
ILE 170.0048
LEU 180.0095
GLY 190.0228
ASP 200.0172
THR 210.0183
LEU 220.0183
GLY 230.0299
VAL 240.0524
GLY 250.0215
THR 260.0173
PHE 270.0082
GLY 280.0164
LYS 290.0183
VAL 300.0119
LYS 310.0080
VAL 320.0079
GLY 330.0095
LYS 340.0067
HIS 350.0057
GLU 360.0086
LEU 370.0128
THR 380.0178
GLY 390.0152
HIS 400.0100
LYS 410.0079
VAL 420.0080
ALA 430.0057
VAL 440.0052
LYS 450.0041
ILE 460.0009
LEU 470.0016
ASN 480.0035
ARG 490.0037
GLN 500.0036
LYS 510.0034
ILE 520.0038
ARG 530.0042
SER 540.0055
LEU 550.0009
ASP 560.0076
VAL 570.0119
VAL 580.0125
GLY 590.0150
LYS 600.0150
ILE 610.0132
ARG 620.0160
ARG 630.0129
GLU 640.0104
ILE 650.0135
GLN 660.0141
ASN 670.0097
LEU 680.0120
LYS 690.0156
LEU 700.0223
PHE 710.0141
ARG 720.0181
HIS 730.0094
PRO 740.0155
HIS 750.0170
ILE 760.0137
ILE 770.0143
LYS 780.0128
LEU 790.0085
TYR 800.0087
GLN 810.0080
VAL 820.0066
ILE 830.0051
SER 840.0039
THR 850.0024
PRO 860.0045
SER 870.0025
ASP 880.0018
ILE 890.0024
PHE 900.0046
MET 910.0020
VAL 920.0011
MET 930.0021
GLU 940.0069
TYR 950.0069
VAL 960.0165
SER 970.0131
GLY 980.0161
GLY 990.0181
GLU 1000.0201
LEU 1010.0209
PHE 1020.0220
ASP 1030.0178
TYR 1040.0178
ILE 1050.0175
CYS 1060.0208
LYS 1070.0179
ASN 1080.0190
GLY 1090.0104
ARG 1100.0097
LEU 1110.0116
ASP 1120.0138
GLU 1130.0132
LYS 1140.0137
GLU 1150.0139
SER 1160.0149
ARG 1170.0124
ARG 1180.0109
LEU 1190.0154
PHE 1200.0154
GLN 1210.0151
GLN 1220.0146
ILE 1230.0161
LEU 1240.0183
SER 1250.0124
GLY 1260.0108
VAL 1270.0124
ASP 1280.0126
TYR 1290.0069
CYS 1300.0044
HIS 1310.0077
ARG 1320.0111
HIS 1330.0090
MET 1340.0077
VAL 1350.0040
VAL 1360.0046
HIS 1370.0053
ARG 1380.0061
ASP 1390.0057
LEU 1400.0070
LYS 1410.0078
PRO 1420.0190
GLU 1430.0181
ASN 1440.0158
VAL 1450.0175
LEU 1460.0174
LEU 1470.0173
ASP 1480.0265
ALA 1490.0281
HIS 1500.0335
MET 1510.0183
ASN 1520.0233
ALA 1530.0252
LYS 1540.0162
ILE 1550.0154
ALA 1560.0157
ASP 1570.0069
PHE 1580.0064
GLY 1590.0066
LEU 1600.0073
SER 1610.0065
ASN 1620.0057
MET 1630.0067
MET 1640.0059
SER 1650.0099
ASP 1660.0081
GLY 1670.0076
GLU 1680.0090
PHE 1690.0106
LEU 1700.0133
ARG 1710.0182
SER 1730.0147
CYS 1740.0124
GLY 1750.0136
SER 1760.0140
PRO 1770.0170
ASN 1780.0210
TYR 1790.0159
ALA 1800.0157
ALA 1810.0187
PRO 1820.0246
GLU 1830.0212
VAL 1840.0196
ILE 1850.0227
SER 1860.0275
GLY 1870.0214
ARG 1880.0240
LEU 1890.0177
TYR 1900.0117
ALA 1910.0070
GLY 1920.0079
PRO 1930.0092
GLU 1940.0136
VAL 1950.0135
ASP 1960.0129
ILE 1970.0129
TRP 1980.0147
SER 1990.0145
SER 2000.0077
GLY 2010.0085
VAL 2020.0098
ILE 2030.0076
LEU 2040.0038
TYR 2050.0076
ALA 2060.0086
LEU 2070.0055
LEU 2080.0059
CYS 2090.0093
GLY 2100.0107
THR 2110.0154
LEU 2120.0234
PRO 2130.0209
PHE 2140.0183
ASP 2150.0327
ASP 2160.0235
ASP 2170.0295
HIS 2180.0265
VAL 2190.0139
PRO 2200.0072
THR 2210.0035
LEU 2220.0155
PHE 2230.0198
LYS 2240.0165
LYS 2250.0190
ILE 2260.0232
CYS 2270.0217
ASP 2280.0199
GLY 2290.0195
ILE 2300.0190
PHE 2310.0166
TYR 2320.0159
THR 2330.0203
PRO 2340.0208
GLN 2350.0261
TYR 2360.0208
LEU 2370.0138
ASN 2380.0120
PRO 2390.0114
SER 2400.0072
VAL 2410.0089
ILE 2420.0113
SER 2430.0103
LEU 2440.0143
LEU 2450.0131
LYS 2460.0142
HIS 2470.0158
MET 2480.0165
LEU 2490.0164
GLN 2500.0165
VAL 2510.0189
ASP 2520.0192
PRO 2530.0180
MET 2540.0174
LYS 2550.0219
ARG 2560.0207
ALA 2570.0191
THR 2580.0211
ILE 2590.0276
LYS 2600.0309
ASP 2610.0257
ILE 2620.0251
ARG 2630.0241
GLU 2640.0233
HIS 2650.0208
GLU 2660.0135
TRP 2670.0123
PHE 2680.0149
LYS 2690.0174
GLN 2700.0107
ASP 2710.0087
LEU 2720.0182
PRO 2730.0153
LYS 2740.0129
TYR 2750.0072
LEU 2760.0112
PHE 2770.0115
PRO 2780.0139
GLU 2790.0080
ASP 2800.0066
ALA 3210.0021
VAL 3220.0026
ALA 3230.0036
TYR 3240.0046
HIS 3250.0072
LEU 3260.0056
ILE 3270.0024
ILE 3280.0073
ASP 3290.0068
ASN 3300.0021
ARG 3310.0023
ARG 3320.0018
ILE 3330.0103
MET 3340.0083
ASN 3350.0111
GLU 3360.0165
ALA 3370.0119
LYS 3380.0085
ASP 3390.0108
PHE 3400.0054
TYR 3410.0107
LEU 3420.0119
ALA 3430.0152
THR 3440.0211
SER 3450.0269
PRO 3460.0257
PRO 3470.0252
ASP 3480.0249
SER 3490.0360
PHE 3500.0241
LEU 3510.0330
ASP 3520.0291
ASP 3530.0269
HIS 3540.0293
HIS 3550.0242
LEU 3560.0250
THR 3570.0246
ARG 3580.0218
PRO 3590.0244
HIS 3600.0208
PRO 3610.0223
GLU 3620.0169
ARG 3630.0076
VAL 3640.0101
PRO 3650.0078
PHE 3660.0068
LEU 3670.0089
VAL 3680.0101
ALA 3690.0106
GLU 3700.0107
THR 3710.0279
PRO 3720.0266
ARG 3730.0106
ALA 3740.0107
ALA 3940.0132
LYS 3950.0117
TRP 3960.0122
HIS 3970.0097
LEU 3980.0095
GLY 3990.0110
ILE 4000.0101
ARG 4010.0088
SER 4020.0077
GLN 4030.0156
SER 4040.0077
ARG 4050.0158
PRO 4060.0060
ASN 4070.0109
ASP 4080.0152
ILE 4090.0086
MET 4100.0092
ALA 4110.0127
GLU 4120.0099
VAL 4130.0058
CYS 4140.0069
ARG 4150.0057
ALA 4160.0040
ILE 4170.0012
LYS 4180.0025
GLN 4190.0023
LEU 4200.0041
ASP 4210.0063
TYR 4220.0064
GLU 4230.0114
TRP 4240.0070
LYS 4250.0052
VAL 4260.0067
VAL 4270.0134
ASN 4280.0154
PRO 4290.0137
TYR 4300.0073
TYR 4310.0074
LEU 4320.0059
ARG 4330.0026
VAL 4340.0044
ARG 4350.0102
ARG 4360.0104
LYS 4370.0111
ASN 4380.0104
PRO 4390.0264
VAL 4400.0245
THR 4410.0268
SER 4420.0152
THR 4430.0215
PHE 4440.0211
SER 4450.0114
LYS 4460.0090
MET 4470.0059
SER 4480.0056
LEU 4490.0070
GLN 4500.0086
LEU 4510.0123
TYR 4520.0121
GLN 4530.0105
VAL 4540.0175
ASP 4550.0198
SER 4560.0296
ARG 4570.0181
THR 4580.0080
TYR 4590.0074
LEU 4600.0109
LEU 4610.0101
ASP 4620.0102
PHE 4630.0050
ARG 4640.0035
SER 4650.0029
ILE 4660.0130
ASP 4670.0216
ASP 4680.0252
GLU 4690.0476
ILE 4700.0400
LYS 2030.0134
SER 2040.0110
PRO 2050.0114
PRO 2060.0157
ILE 2070.0143
LEU 2080.0135
PRO 2090.0103
PRO 2100.0076
HIS 2110.0046
LEU 2120.0057
LEU 2130.0051
GLN 2140.0070
VAL 2150.0083
ILE 2160.0081
LEU 2170.0072
ASN 2180.0128
LYS 2190.0090
ASP 2200.0123
THR 2210.0219
ASN 2220.0211
ILE 2230.0170
SER 2240.0194
CYS 2250.0143
ASP 2260.0092
PRO 2270.0100
ALA 2280.0115
LEU 2290.0134
LEU 2300.0088
PRO 2310.0068
GLU 2320.0054
PRO 2330.0029
ASN 2340.0034
HIS 2350.0027
VAL 2360.0036
MET 2370.0036
LEU 2380.0046
ASN 2390.0036
HIS 2400.0039
LEU 2410.0052
TYR 2420.0089
ALA 2430.0111
LEU 2440.0123
SER 2450.0260
ILE 2460.0181
LYS 2470.0129
ASP 2480.0086
SER 2490.0061
VAL 2500.0116
MET 2510.0125
VAL 2520.0109
LEU 2530.0085
SER 2540.0065
ALA 2550.0047
THR 2560.0035
HIS 2570.0041
ARG 2580.0046
TYR 2590.0048
LYS 2600.0041
LYS 2610.0073
LYS 2620.0079
TYR 2630.0037
VAL 2640.0035
THR 2650.0044
THR 2660.0076
LEU 2670.0086
LEU 2680.0088
TYR 2690.0167
LYS 2700.0158
PRO 2710.0150
PRO 5280.0259
GLY 5290.0179
SER 5300.0117
HIS 5310.0124
THR 5320.0145
ILE 5330.0135
GLU 5340.0097
PHE 5350.0075
PHE 5360.0053
GLU 5370.0072
MET 5380.0052
CYS 5390.0045
ALA 5400.0074
ASN 5410.0061
LEU 5420.0038
ILE 5430.0067
LYS 5440.0094
ILE 5450.0057
LEU 5460.0099
ALA 5470.0224
GLN 5480.0297

If you find results from this site helpful for your research, please cite one of our papers:

elNémo is maintained by Yves-Henri Sanejouand.
It was developed by Karsten Suhre.
Between 2003 and 2014, it was hosted by IGS (Marseille).
Between 2015 and 2025, it was hosted by US2B (Nantes).
Last modification: april 24th, 2026.