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***  Apo AMPK  ***

<R2> analysis for 260711175133601569

---  normal mode 99  ---

This page gives a visualization of the normalized mean square displacement <R2> of all C-alpha atoms in the protein that are associated to this mode (black bars). The three components of the corresponding eigenvector are shown on the left (colored bars). Here is the raw data for <R2> and for the eigenvector (shift-click on the links for download).

XYZresidue<R2><R2>max = 0.0524
ARG 100.0321
VAL 110.0299
LYS 120.0239
ILE 130.0252
GLY 140.0415
HIS 150.0290
TYR 160.0135
ILE 170.0096
LEU 180.0198
GLY 190.0431
ASP 200.0406
THR 210.0204
LEU 220.0122
GLY 230.0168
VAL 240.0336
GLY 250.0195
THR 260.0139
PHE 270.0202
GLY 280.0189
LYS 290.0151
VAL 300.0065
LYS 310.0115
VAL 320.0130
GLY 330.0155
LYS 340.0182
HIS 350.0131
GLU 360.0235
LEU 370.0305
THR 380.0524
GLY 390.0479
HIS 400.0352
LYS 410.0282
VAL 420.0270
ALA 430.0058
VAL 440.0066
LYS 450.0060
ILE 460.0067
LEU 470.0083
ASN 480.0087
ARG 490.0108
GLN 500.0109
LYS 510.0102
ILE 520.0143
ARG 530.0306
SER 540.0328
LEU 550.0132
ASP 560.0215
VAL 570.0295
VAL 580.0212
GLY 590.0188
LYS 600.0188
ILE 610.0163
ARG 620.0201
ARG 630.0128
GLU 640.0090
ILE 650.0083
GLN 660.0108
ASN 670.0102
LEU 680.0073
LYS 690.0081
LEU 700.0142
PHE 710.0075
ARG 720.0071
HIS 730.0045
PRO 740.0075
HIS 750.0071
ILE 760.0064
ILE 770.0079
LYS 780.0064
LEU 790.0076
TYR 800.0071
GLN 810.0048
VAL 820.0041
ILE 830.0032
SER 840.0025
THR 850.0074
PRO 860.0141
SER 870.0056
ASP 880.0026
ILE 890.0032
PHE 900.0047
MET 910.0062
VAL 920.0071
MET 930.0088
GLU 940.0165
TYR 950.0158
VAL 960.0121
SER 970.0190
GLY 980.0144
GLY 990.0092
GLU 1000.0084
LEU 1010.0098
PHE 1020.0068
ASP 1030.0035
TYR 1040.0078
ILE 1050.0077
CYS 1060.0216
LYS 1070.0172
ASN 1080.0039
GLY 1090.0122
ARG 1100.0121
LEU 1110.0158
ASP 1120.0261
GLU 1130.0182
LYS 1140.0197
GLU 1150.0192
SER 1160.0179
ARG 1170.0124
ARG 1180.0152
LEU 1190.0129
PHE 1200.0099
GLN 1210.0077
GLN 1220.0081
ILE 1230.0081
LEU 1240.0038
SER 1250.0031
GLY 1260.0026
VAL 1270.0057
ASP 1280.0069
TYR 1290.0055
CYS 1300.0075
HIS 1310.0087
ARG 1320.0103
HIS 1330.0085
MET 1340.0093
VAL 1350.0090
VAL 1360.0064
HIS 1370.0052
ARG 1380.0071
ASP 1390.0062
LEU 1400.0050
LYS 1410.0074
PRO 1420.0093
GLU 1430.0068
ASN 1440.0075
VAL 1450.0110
LEU 1460.0111
LEU 1470.0131
ASP 1480.0161
ALA 1490.0234
HIS 1500.0291
MET 1510.0175
ASN 1520.0194
ALA 1530.0157
LYS 1540.0096
ILE 1550.0087
ALA 1560.0078
ASP 1570.0074
PHE 1580.0063
GLY 1590.0063
LEU 1600.0080
SER 1610.0077
ASN 1620.0091
MET 1630.0097
MET 1640.0068
SER 1650.0054
ASP 1660.0027
GLY 1670.0043
GLU 1680.0037
PHE 1690.0058
LEU 1700.0046
ARG 1710.0043
SER 1730.0072
CYS 1740.0073
GLY 1750.0058
SER 1760.0067
PRO 1770.0067
ASN 1780.0070
TYR 1790.0043
ALA 1800.0024
ALA 1810.0022
PRO 1820.0036
GLU 1830.0053
VAL 1840.0046
ILE 1850.0016
SER 1860.0030
GLY 1870.0044
ARG 1880.0030
LEU 1890.0040
TYR 1900.0038
ALA 1910.0042
GLY 1920.0026
PRO 1930.0043
GLU 1940.0042
VAL 1950.0024
ASP 1960.0030
ILE 1970.0059
TRP 1980.0038
SER 1990.0041
SER 2000.0062
GLY 2010.0056
VAL 2020.0054
ILE 2030.0057
LEU 2040.0067
TYR 2050.0071
ALA 2060.0073
LEU 2070.0079
LEU 2080.0090
CYS 2090.0105
GLY 2100.0109
THR 2110.0099
LEU 2120.0107
PRO 2130.0090
PHE 2140.0067
ASP 2150.0131
ASP 2160.0115
ASP 2170.0199
HIS 2180.0133
VAL 2190.0140
PRO 2200.0148
THR 2210.0105
LEU 2220.0109
PHE 2230.0089
LYS 2240.0063
LYS 2250.0078
ILE 2260.0069
CYS 2270.0063
ASP 2280.0097
GLY 2290.0100
ILE 2300.0093
PHE 2310.0097
TYR 2320.0108
THR 2330.0102
PRO 2340.0221
GLN 2350.0367
TYR 2360.0100
LEU 2370.0052
ASN 2380.0060
PRO 2390.0079
SER 2400.0078
VAL 2410.0078
ILE 2420.0073
SER 2430.0075
LEU 2440.0084
LEU 2450.0098
LYS 2460.0111
HIS 2470.0145
MET 2480.0108
LEU 2490.0091
GLN 2500.0119
VAL 2510.0118
ASP 2520.0179
PRO 2530.0131
MET 2540.0165
LYS 2550.0227
ARG 2560.0170
ALA 2570.0146
THR 2580.0133
ILE 2590.0152
LYS 2600.0269
ASP 2610.0232
ILE 2620.0146
ARG 2630.0158
GLU 2640.0200
HIS 2650.0173
GLU 2660.0142
TRP 2670.0102
PHE 2680.0044
LYS 2690.0089
GLN 2700.0047
ASP 2710.0053
LEU 2720.0010
PRO 2730.0061
LYS 2740.0142
TYR 2750.0047
LEU 2760.0068
PHE 2770.0158
PRO 2780.0419
GLU 2790.0275
ASP 2800.0219
ALA 3210.0181
VAL 3220.0113
ALA 3230.0282
TYR 3240.0293
HIS 3250.0223
LEU 3260.0092
ILE 3270.0233
ILE 3280.0279
ASP 3290.0088
ASN 3300.0199
ARG 3310.0283
ARG 3320.0163
ILE 3330.0059
MET 3340.0051
ASN 3350.0162
GLU 3360.0196
ALA 3370.0169
LYS 3380.0129
ASP 3390.0076
PHE 3400.0072
TYR 3410.0052
LEU 3420.0086
ALA 3430.0149
THR 3440.0218
SER 3450.0309
PRO 3460.0250
PRO 3470.0230
ASP 3480.0255
SER 3490.0383
PHE 3500.0292
LEU 3510.0383
ASP 3520.0330
ASP 3530.0293
HIS 3540.0309
HIS 3550.0254
LEU 3560.0269
THR 3570.0254
ARG 3580.0237
PRO 3590.0271
HIS 3600.0237
PRO 3610.0246
GLU 3620.0174
ARG 3630.0060
VAL 3640.0112
PRO 3650.0125
PHE 3660.0077
LEU 3670.0084
VAL 3680.0082
ALA 3690.0117
GLU 3700.0143
THR 3710.0229
PRO 3720.0225
ARG 3730.0085
ALA 3740.0111
ALA 3940.0324
LYS 3950.0263
TRP 3960.0166
HIS 3970.0110
LEU 3980.0116
GLY 3990.0110
ILE 4000.0115
ARG 4010.0077
SER 4020.0081
GLN 4030.0170
SER 4040.0040
ARG 4050.0173
PRO 4060.0154
ASN 4070.0106
ASP 4080.0094
ILE 4090.0086
MET 4100.0071
ALA 4110.0029
GLU 4120.0034
VAL 4130.0022
CYS 4140.0045
ARG 4150.0080
ALA 4160.0068
ILE 4170.0077
LYS 4180.0123
GLN 4190.0134
LEU 4200.0127
ASP 4210.0121
TYR 4220.0087
GLU 4230.0074
TRP 4240.0083
LYS 4250.0097
VAL 4260.0116
VAL 4270.0083
ASN 4280.0106
PRO 4290.0178
TYR 4300.0111
TYR 4310.0093
LEU 4320.0110
ARG 4330.0055
VAL 4340.0052
ARG 4350.0064
ARG 4360.0077
LYS 4370.0051
ASN 4380.0053
PRO 4390.0064
VAL 4400.0082
THR 4410.0114
SER 4420.0057
THR 4430.0072
PHE 4440.0077
SER 4450.0049
LYS 4460.0035
MET 4470.0034
SER 4480.0048
LEU 4490.0051
GLN 4500.0055
LEU 4510.0113
TYR 4520.0066
GLN 4530.0059
VAL 4540.0063
ASP 4550.0165
SER 4560.0283
ARG 4570.0153
THR 4580.0071
TYR 4590.0103
LEU 4600.0075
LEU 4610.0084
ASP 4620.0082
PHE 4630.0055
ARG 4640.0043
SER 4650.0032
ILE 4660.0016
ASP 4670.0023
ASP 4680.0028
GLU 4690.0039
ILE 4700.0023
LYS 2030.0501
SER 2040.0257
PRO 2050.0138
PRO 2060.0072
ILE 2070.0045
LEU 2080.0025
PRO 2090.0082
PRO 2100.0092
HIS 2110.0085
LEU 2120.0086
LEU 2130.0091
GLN 2140.0089
VAL 2150.0082
ILE 2160.0059
LEU 2170.0017
ASN 2180.0098
LYS 2190.0107
ASP 2200.0131
THR 2210.0221
ASN 2220.0221
ILE 2230.0196
SER 2240.0227
CYS 2250.0188
ASP 2260.0134
PRO 2270.0105
ALA 2280.0093
LEU 2290.0135
LEU 2300.0106
PRO 2310.0089
GLU 2320.0080
PRO 2330.0045
ASN 2340.0047
HIS 2350.0031
VAL 2360.0050
MET 2370.0054
LEU 2380.0050
ASN 2390.0042
HIS 2400.0060
LEU 2410.0063
TYR 2420.0075
ALA 2430.0079
LEU 2440.0102
SER 2450.0220
ILE 2460.0130
LYS 2470.0167
ASP 2480.0079
SER 2490.0054
VAL 2500.0133
MET 2510.0074
VAL 2520.0055
LEU 2530.0047
SER 2540.0046
ALA 2550.0046
THR 2560.0042
HIS 2570.0053
ARG 2580.0046
TYR 2590.0037
LYS 2600.0080
LYS 2610.0069
LYS 2620.0053
TYR 2630.0049
VAL 2640.0051
THR 2650.0061
THR 2660.0058
LEU 2670.0049
LEU 2680.0050
TYR 2690.0064
LYS 2700.0073
PRO 2710.0089
PRO 5280.0132
GLY 5290.0132
SER 5300.0152
HIS 5310.0083
THR 5320.0090
ILE 5330.0116
GLU 5340.0097
PHE 5350.0086
PHE 5360.0094
GLU 5370.0088
MET 5380.0084
CYS 5390.0087
ALA 5400.0071
ASN 5410.0074
LEU 5420.0073
ILE 5430.0029
LYS 5440.0040
ILE 5450.0045
LEU 5460.0031
ALA 5470.0045
GLN 5480.0099

If you find results from this site helpful for your research, please cite one of our papers:

elNémo is maintained by Yves-Henri Sanejouand.
It was developed by Karsten Suhre.
Between 2003 and 2014, it was hosted by IGS (Marseille).
Between 2015 and 2025, it was hosted by US2B (Nantes).
Last modification: april 24th, 2026.