CNRS Nantes University US2B US2B
home |  start a new run |  job status |  references&downloads |  examples |  help  

Should you encounter any unexpected behaviour,
please let us know.
elNémo has been relocated.
**Some cleaning from time to time**
Sorry for the inconvenience.


***  Holo AMPK  ***

<R2> analysis for 260711185133617066

---  normal mode 103  ---

This page gives a visualization of the normalized mean square displacement <R2> of all C-alpha atoms in the protein that are associated to this mode (black bars). The three components of the corresponding eigenvector are shown on the left (colored bars). Here is the raw data for <R2> and for the eigenvector (shift-click on the links for download).

XYZresidue<R2><R2>max = 0.0442
GLY 110.0073
SER 120.0082
VAL 130.0084
LYS 140.0064
ILE 150.0068
GLY 160.0064
HIS 170.0043
TYR 180.0056
ILE 190.0070
LEU 200.0094
GLY 210.0080
ASP 220.0087
THR 230.0076
LEU 240.0102
GLY 250.0090
VAL 260.0081
GLY 270.0070
THR 280.0069
PHE 290.0047
GLY 300.0037
LYS 310.0051
VAL 320.0062
LYS 330.0053
VAL 340.0073
GLY 350.0068
LYS 360.0078
HIS 370.0043
GLU 380.0050
LEU 390.0061
THR 400.0058
GLY 410.0036
HIS 420.0035
LYS 430.0039
VAL 440.0036
ALA 450.0040
VAL 460.0043
LYS 470.0036
ILE 480.0031
LEU 490.0039
ASN 500.0047
ARG 510.0032
GLN 520.0048
LYS 530.0061
ILE 540.0051
ARG 550.0060
SER 560.0076
LEU 570.0072
ASP 580.0064
VAL 590.0056
VAL 600.0048
GLY 610.0083
LYS 620.0052
ILE 630.0033
ARG 640.0071
ARG 650.0075
GLU 660.0048
ILE 670.0065
GLN 680.0112
ASN 690.0114
LEU 700.0105
LYS 710.0118
LEU 720.0176
PHE 730.0171
ARG 740.0233
HIS 750.0254
PRO 760.0169
HIS 770.0164
ILE 780.0140
ILE 790.0126
LYS 800.0119
LEU 810.0044
TYR 820.0013
GLN 830.0017
VAL 840.0012
ILE 850.0040
SER 860.0033
THR 870.0041
PRO 880.0039
SER 890.0035
ASP 900.0032
ILE 910.0033
PHE 920.0032
MET 930.0022
VAL 940.0022
MET 950.0022
GLU 960.0027
TYR 970.0042
VAL 980.0084
SER 990.0128
GLY 1000.0154
GLY 1010.0228
GLU 1020.0225
LEU 1030.0168
PHE 1040.0267
ASP 1050.0302
TYR 1060.0324
ILE 1070.0235
CYS 1080.0357
LYS 1090.0442
ASN 1100.0368
GLY 1110.0188
ARG 1120.0145
LEU 1130.0130
ASP 1140.0091
GLU 1150.0115
LYS 1160.0241
GLU 1170.0235
SER 1180.0230
ARG 1190.0193
ARG 1200.0176
LEU 1210.0177
PHE 1220.0167
GLN 1230.0102
GLN 1240.0124
ILE 1250.0183
LEU 1260.0208
SER 1270.0207
GLY 1280.0232
VAL 1290.0236
ASP 1300.0225
TYR 1310.0234
CYS 1320.0178
HIS 1330.0168
ARG 1340.0212
HIS 1350.0188
MET 1360.0130
VAL 1370.0071
VAL 1380.0041
HIS 1390.0067
ARG 1400.0081
ASP 1410.0098
LEU 1420.0094
LYS 1430.0110
PRO 1440.0134
GLU 1450.0149
ASN 1460.0068
VAL 1470.0048
LEU 1480.0062
LEU 1490.0081
ASP 1500.0127
ALA 1510.0334
HIS 1520.0269
MET 1530.0139
ASN 1540.0102
ALA 1550.0140
LYS 1560.0097
ILE 1570.0094
ALA 1580.0073
ASP 1590.0070
PHE 1600.0061
GLY 1610.0098
LEU 1620.0101
SER 1630.0040
ASN 1640.0050
MET 1650.0096
MET 1660.0120
SER 1670.0111
ASP 1680.0097
GLY 1690.0087
GLU 1700.0093
PHE 1710.0147
LEU 1720.0130
ARG 1730.0128
SER 1750.0129
CYS 1760.0129
GLY 1770.0130
SER 1780.0132
PRO 1790.0093
ASN 1800.0050
TYR 1810.0055
ALA 1820.0038
ALA 1830.0032
PRO 1840.0035
GLU 1850.0076
VAL 1860.0093
ILE 1870.0105
SER 1880.0111
GLY 1890.0157
ARG 1900.0133
LEU 1910.0138
TYR 1920.0119
ALA 1930.0124
GLY 1940.0093
PRO 1950.0075
GLU 1960.0076
VAL 1970.0042
ASP 1980.0076
ILE 1990.0107
TRP 2000.0055
SER 2010.0053
SER 2020.0068
GLY 2030.0069
VAL 2040.0061
ILE 2050.0065
LEU 2060.0046
TYR 2070.0044
ALA 2080.0064
LEU 2090.0063
LEU 2100.0067
CYS 2110.0062
GLY 2120.0090
THR 2130.0086
LEU 2140.0078
PRO 2150.0046
PHE 2160.0029
ASP 2170.0035
ASP 2180.0067
ASP 2190.0119
HIS 2200.0099
VAL 2210.0082
PRO 2220.0046
THR 2230.0037
LEU 2240.0032
PHE 2250.0075
LYS 2260.0089
LYS 2270.0084
ILE 2280.0090
CYS 2290.0115
ASP 2300.0140
GLY 2310.0114
ILE 2320.0124
PHE 2330.0120
TYR 2340.0125
THR 2350.0177
PRO 2360.0159
GLN 2370.0257
TYR 2380.0253
LEU 2390.0195
ASN 2400.0198
PRO 2410.0165
SER 2420.0149
VAL 2430.0155
ILE 2440.0139
SER 2450.0080
LEU 2460.0089
LEU 2470.0106
LYS 2480.0092
HIS 2490.0084
MET 2500.0102
LEU 2510.0069
GLN 2520.0090
VAL 2530.0078
ASP 2540.0123
PRO 2550.0097
MET 2560.0148
LYS 2570.0144
ARG 2580.0103
ALA 2590.0141
THR 2600.0211
ILE 2610.0197
LYS 2620.0199
ASP 2630.0126
ILE 2640.0050
ARG 2650.0110
GLU 2660.0154
HIS 2670.0079
GLU 2680.0179
TRP 2690.0184
PHE 2700.0107
LYS 2710.0164
GLN 2720.0263
ASP 2730.0271
LEU 2740.0142
PRO 2750.0139
LYS 2760.0212
TYR 2770.0194
LEU 2780.0134
PHE 2790.0209
PRO 2800.0218
GLU 2810.0208
ASP 2820.0388
LYS 3950.0167
ALA 3960.0142
LYS 3970.0119
TRP 3980.0101
HIS 3990.0072
LEU 4000.0118
GLY 4010.0098
ILE 4020.0116
ARG 4030.0138
SER 4040.0150
GLN 4050.0167
SER 4060.0226
ARG 4070.0218
PRO 4080.0152
ASN 4090.0186
ASP 4100.0140
ILE 4110.0085
MET 4120.0061
ALA 4130.0062
GLU 4140.0050
VAL 4150.0111
CYS 4160.0087
ARG 4170.0074
ALA 4180.0103
ILE 4190.0103
LYS 4200.0088
GLN 4210.0128
LEU 4220.0101
ASP 4230.0042
TYR 4240.0032
GLU 4250.0107
TRP 4260.0094
LYS 4270.0087
VAL 4280.0077
VAL 4290.0088
ASN 4300.0089
PRO 4310.0081
TYR 4320.0059
TYR 4330.0053
LEU 4340.0055
ARG 4350.0082
VAL 4360.0073
ARG 4370.0054
ARG 4380.0049
LYS 4390.0061
ASN 4400.0107
PRO 4410.0147
VAL 4420.0145
THR 4430.0138
SER 4440.0160
THR 4450.0085
TYR 4460.0057
SER 4470.0027
LYS 4480.0014
MET 4490.0030
SER 4500.0063
LEU 4510.0043
GLN 4520.0033
LEU 4530.0024
TYR 4540.0026
GLN 4550.0046
VAL 4560.0190
ASP 4570.0238
SER 4580.0284
ARG 4590.0224
THR 4600.0060
TYR 4610.0044
LEU 4620.0072
LEU 4630.0068
ASP 4640.0083
PHE 4650.0038
ARG 4660.0022
SER 4670.0008
ILE 4680.0017
ASP 4690.0037
ASP 4700.0094
GLU 4710.0078
LEU 5260.0097
THR 5270.0145
PRO 5280.0145
ARG 5290.0111
PRO 5300.0118
GLY 5310.0080
SER 5320.0082
HIS 5330.0089
THR 5340.0108
ILE 5350.0106
GLU 5360.0080
PHE 5370.0070
PHE 5380.0074
GLU 5390.0074
MET 5400.0061
CYS 5410.0023
ALA 5420.0084
ASN 5430.0135
LEU 5440.0110
ILE 5450.0135
LYS 5460.0294
ILE 5470.0318
LEU 5480.0339
ALA 5490.0423
PRO 740.0033
ALA 750.0023
GLN 760.0027
ALA 770.0040
ARG 780.0045
PRO 790.0056
THR 800.0048
VAL 810.0043
PHE 820.0031
ARG 830.0032
TRP 840.0071
THR 850.0096
GLY 860.0099
GLY 870.0091
GLY 880.0079
LYS 890.0101
GLU 900.0072
VAL 910.0053
TYR 920.0028
LEU 930.0036
SER 940.0036
GLY 950.0032
SER 960.0037
PHE 970.0043
ASN 980.0053
ASN 990.0069
TRP 1000.0057
SER 1010.0061
LYS 1020.0048
LEU 1030.0031
PRO 1040.0027
LEU 1050.0027
THR 1060.0041
ARG 1070.0027
ASP 1080.0040
HIS 1090.0048
ASN 1100.0071
ASN 1110.0070
PHE 1120.0042
VAL 1130.0058
ALA 1140.0038
ILE 1150.0044
LEU 1160.0036
ASP 1170.0038
LEU 1180.0033
PRO 1190.0023
GLU 1200.0025
GLY 1210.0017
GLU 1220.0006
HIS 1230.0007
GLN 1240.0032
TYR 1250.0024
LYS 1260.0015
PHE 1270.0025
PHE 1280.0031
VAL 1290.0063
ASP 1300.0076
GLY 1310.0046
GLN 1320.0056
TRP 1330.0065
THR 1340.0025
HIS 1350.0006
ASP 1360.0005
PRO 1370.0043
SER 1380.0032
GLU 1390.0035
PRO 1400.0072
ILE 1410.0087
VAL 1420.0118
THR 1430.0138
SER 1440.0089
GLN 1450.0046
LEU 1460.0065
GLY 1470.0136
THR 1480.0174
VAL 1490.0060
ASN 1500.0051
ASN 1510.0049
ILE 1520.0057
ILE 1530.0060
GLN 1540.0049
VAL 1550.0052
LYS 1560.0050
LYS 1570.0052
THR 1580.0046
ASP 1590.0043
PHE 1600.0040
GLU 1610.0025
VAL 1620.0017
PHE 1630.0028
ASP 1640.0044
ALA 1650.0017
LEU 1660.0035
MET 1670.0059
VAL 1680.0055
ASP 1690.0069
SER 1700.0116
GLN 1710.0144
HIS 1880.0221
GLN 1890.0171
GLU 1900.0155
PRO 1910.0106
TYR 1920.0078
VAL 1930.0089
CYS 1940.0067
LYS 1950.0040
ARG 2010.0183
ALA 2020.0135
PRO 2030.0072
PRO 2040.0053
ILE 2050.0025
LEU 2060.0098
PRO 2070.0109
PRO 2080.0111
HIS 2090.0096
LEU 2100.0063
LEU 2110.0073
GLN 2120.0095
VAL 2130.0095
ILE 2140.0131
LEU 2150.0150
ASN 2160.0170
LYS 2170.0165
ASP 2180.0142
THR 2190.0142
GLY 2200.0156
ILE 2210.0288
SER 2220.0212
CYS 2230.0070
ASP 2240.0056
PRO 2250.0071
ALA 2260.0111
LEU 2270.0103
LEU 2280.0110
PRO 2290.0107
GLU 2300.0104
PRO 2310.0122
ASN 2320.0110
HIS 2330.0074
VAL 2340.0075
MET 2350.0062
LEU 2360.0058
ASN 2370.0040
HIS 2380.0034
LEU 2390.0042
TYR 2400.0052
ALA 2410.0103
LEU 2420.0060
SER 2430.0025
ILE 2440.0068
LYS 2450.0080
ASP 2460.0101
GLY 2470.0119
VAL 2480.0082
MET 2490.0070
VAL 2500.0070
LEU 2510.0078
SER 2520.0084
ALA 2530.0082
THR 2540.0094
HIS 2550.0097
ARG 2560.0046
TYR 2570.0029
LYS 2580.0053
LYS 2590.0068
LYS 2600.0042
TYR 2610.0089
VAL 2620.0091
THR 2630.0091
THR 2640.0092
LEU 2650.0094
LEU 2660.0085
TYR 2670.0069
LYS 2680.0085
PRO 2690.0091
ILE 2700.0093
ASN 250.0187
SER 260.0199
VAL 270.0170
TYR 280.0109
THR 290.0110
SER 300.0068
PHE 310.0050
MET 320.0088
LYS 330.0071
SER 340.0054
HIS 350.0105
ARG 360.0115
CYS 370.0111
TYR 380.0102
ASP 390.0084
LEU 400.0063
ILE 410.0060
PRO 420.0054
THR 430.0052
SER 440.0070
SER 450.0086
LYS 460.0070
LEU 470.0068
VAL 480.0055
VAL 490.0065
PHE 500.0037
ASP 510.0048
THR 520.0064
SER 530.0060
LEU 540.0046
GLN 550.0051
VAL 560.0050
LYS 570.0053
LYS 580.0052
ALA 590.0048
PHE 600.0045
PHE 610.0042
ALA 620.0053
LEU 630.0047
VAL 640.0040
THR 650.0043
ASN 660.0048
GLY 670.0030
VAL 680.0035
ARG 690.0051
ALA 700.0053
ALA 710.0050
PRO 720.0058
LEU 730.0078
TRP 740.0087
ASP 750.0122
SER 760.0143
LYS 770.0187
LYS 780.0174
GLN 790.0124
SER 800.0110
PHE 810.0098
VAL 820.0121
GLY 830.0114
MET 840.0103
LEU 850.0066
THR 860.0067
ILE 870.0073
THR 880.0077
ASP 890.0079
PHE 900.0058
ILE 910.0057
ASN 920.0064
ILE 930.0057
LEU 940.0044
HIS 950.0033
ARG 960.0044
TYR 970.0043
TYR 980.0029
LYS 990.0025
SER 1000.0064
ALA 1010.0073
LEU 1020.0089
VAL 1030.0085
GLN 1040.0078
ILE 1050.0035
TYR 1060.0051
GLU 1070.0060
LEU 1080.0050
GLU 1090.0049
GLU 1100.0040
HIS 1110.0056
LYS 1120.0062
ILE 1130.0079
GLU 1140.0085
THR 1150.0129
TRP 1160.0097
ARG 1170.0083
GLU 1180.0087
VAL 1190.0069
TYR 1200.0062
LEU 1210.0072
GLN 1220.0161
ASP 1230.0181
SER 1240.0105
PHE 1250.0078
LYS 1260.0075
PRO 1270.0089
LEU 1280.0111
VAL 1290.0122
CYS 1300.0069
ILE 1310.0070
SER 1320.0074
PRO 1330.0083
ASN 1340.0111
ALA 1350.0156
SER 1360.0132
LEU 1370.0130
PHE 1380.0135
ASP 1390.0159
ALA 1400.0115
VAL 1410.0134
SER 1420.0122
SER 1430.0080
LEU 1440.0092
ILE 1450.0185
ARG 1460.0141
ASN 1470.0157
LYS 1480.0213
ILE 1490.0153
HIS 1500.0071
ARG 1510.0059
LEU 1520.0050
PRO 1530.0039
VAL 1540.0030
ILE 1550.0035
ASP 1560.0116
PRO 1570.0141
GLU 1580.0178
SER 1590.0145
GLY 1600.0061
ASN 1610.0068
THR 1620.0041
LEU 1630.0031
TYR 1640.0016
ILE 1650.0029
LEU 1660.0041
THR 1670.0039
HIS 1680.0049
LYS 1690.0042
ARG 1700.0036
ILE 1710.0036
LEU 1720.0037
LYS 1730.0033
PHE 1740.0030
LEU 1750.0097
LYS 1760.0102
LEU 1770.0099
PHE 1780.0094
ILE 1790.0098
THR 1800.0194
GLU 1810.0169
PHE 1820.0171
PRO 1830.0259
LYS 1840.0340
PRO 1850.0134
GLU 1860.0098
PHE 1870.0118
MET 1880.0139
SER 1890.0109
LYS 1900.0161
SER 1910.0158
LEU 1920.0120
GLU 1930.0202
GLU 1940.0169
LEU 1950.0145
GLN 1960.0177
ILE 1970.0132
GLY 1980.0125
THR 1990.0149
TYR 2000.0165
ALA 2010.0264
ASN 2020.0258
ILE 2030.0130
ALA 2040.0108
MET 2050.0010
VAL 2060.0010
ARG 2070.0024
THR 2080.0043
THR 2090.0047
THR 2100.0045
PRO 2110.0038
VAL 2120.0037
TYR 2130.0026
VAL 2140.0008
ALA 2150.0026
LEU 2160.0040
GLY 2170.0056
ILE 2180.0053
PHE 2190.0053
VAL 2200.0100
GLN 2210.0119
HIS 2220.0118
ARG 2230.0110
VAL 2240.0098
SER 2250.0031
ALA 2260.0013
LEU 2270.0006
PRO 2280.0018
VAL 2290.0031
VAL 2300.0031
ASP 2310.0044
GLU 2320.0114
LYS 2330.0104
GLY 2340.0094
ARG 2350.0057
VAL 2360.0053
VAL 2370.0077
ASP 2380.0089
ILE 2390.0079
TYR 2400.0047
SER 2410.0027
LYS 2420.0019
PHE 2430.0023
ASP 2440.0013
VAL 2450.0031
ILE 2460.0023
ASN 2470.0039
LEU 2480.0047
ALA 2490.0049
ALA 2500.0062
GLU 2510.0087
LYS 2520.0077
THR 2530.0081
TYR 2540.0052
ASN 2550.0069
ASN 2560.0069
LEU 2570.0057
ASP 2580.0072
VAL 2590.0069
SER 2600.0089
VAL 2610.0077
THR 2620.0113
LYS 2630.0127
ALA 2640.0101
LEU 2650.0117
GLN 2660.0118
HIS 2670.0092
ARG 2680.0051
SER 2690.0071
HIS 2700.0040
TYR 2710.0071
PHE 2720.0096
GLU 2730.0155
GLY 2740.0185
VAL 2750.0131
LEU 2760.0141
LYS 2770.0083
CYS 2780.0060
TYR 2790.0004
LEU 2800.0153
HIS 2810.0163
GLU 2820.0158
THR 2830.0135
LEU 2840.0111
GLU 2850.0141
THR 2860.0141
ILE 2870.0100
ILE 2880.0093
ASN 2890.0118
ARG 2900.0063
LEU 2910.0050
VAL 2920.0047
GLU 2930.0063
ALA 2940.0068
GLU 2950.0033
VAL 2960.0032
HIS 2970.0025
ARG 2980.0046
LEU 2990.0063
VAL 3000.0115
VAL 3010.0027
VAL 3020.0070
ASP 3030.0179
GLU 3040.0255
ASN 3050.0248
ASP 3060.0167
VAL 3070.0112
VAL 3080.0039
LYS 3090.0090
GLY 3100.0096
ILE 3110.0073
VAL 3120.0053
SER 3130.0036
LEU 3140.0020
SER 3150.0049
ASP 3160.0032
ILE 3170.0032
LEU 3180.0037
GLN 3190.0054
ALA 3200.0138
LEU 3210.0079
VAL 3220.0088
LEU 3230.0170
THR 3240.0224

If you find results from this site helpful for your research, please cite one of our papers:

elNémo is maintained by Yves-Henri Sanejouand.
It was developed by Karsten Suhre.
Between 2003 and 2014, it was hosted by IGS (Marseille).
Between 2015 and 2025, it was hosted by US2B (Nantes).
Last modification: april 24th, 2026.