Should you encounter any unexpected behaviour,
please let us know.
elNémo has been relocated.
Some cleaning from time to time
Sorry for the inconvenience.

* Holo AMPK *

<R²> analysis for 260711185133617066

--- normal mode 28 ---

This page gives a visualization of the normalized mean square displacement <R²> of all C-alpha atoms in the protein that are associated to this mode (black bars). The three components of the corresponding eigenvector are shown on the left (colored bars). Here is the raw data for <R2> and for the eigenvector (shift-click on the links for download).

X Y Z residue <R²> <R²>_max = 0.1198
GLY 11 0.0063
SER 12 0.0056
VAL 13 0.0039
LYS 14 0.0048
ILE 15 0.0050
GLY 16 0.0100
HIS 17 0.0109
TYR 18 0.0085
ILE 19 0.0073
LEU 20 0.0042
GLY 21 0.0043
ASP 22 0.0040
THR 23 0.0047
LEU 24 0.0056
GLY 25 0.0070
VAL 26 0.0092
GLY 27 0.0105
THR 28 0.0116
PHE 29 0.0105
GLY 30 0.0089
LYS 31 0.0061
VAL 32 0.0058
LYS 33 0.0049
VAL 34 0.0050
GLY 35 0.0052
LYS 36 0.0083
HIS 37 0.0126
GLU 38 0.0158
LEU 39 0.0202
THR 40 0.0192
GLY 41 0.0116
HIS 42 0.0099
LYS 43 0.0067
VAL 44 0.0064
ALA 45 0.0054
VAL 46 0.0060
LYS 47 0.0070
ILE 48 0.0064
LEU 49 0.0075
ASN 50 0.0080
ARG 51 0.0091
GLN 52 0.0112
LYS 53 0.0122
ILE 54 0.0120
ARG 55 0.0129
SER 56 0.0150
LEU 57 0.0154
ASP 58 0.0136
VAL 59 0.0128
VAL 60 0.0098
GLY 61 0.0085
LYS 62 0.0087
ILE 63 0.0087
ARG 64 0.0084
ARG 65 0.0086
GLU 66 0.0076
ILE 67 0.0072
GLN 68 0.0074
ASN 69 0.0078
LEU 70 0.0076
LYS 71 0.0071
LEU 72 0.0066
PHE 73 0.0062
ARG 74 0.0064
HIS 75 0.0065
PRO 76 0.0059
HIS 77 0.0057
ILE 78 0.0059
ILE 79 0.0062
LYS 80 0.0067
LEU 81 0.0083
TYR 82 0.0073
GLN 83 0.0064
VAL 84 0.0057
ILE 85 0.0045
SER 86 0.0041
THR 87 0.0041
PRO 88 0.0056
SER 89 0.0063
ASP 90 0.0057
ILE 91 0.0053
PHE 92 0.0050
MET 93 0.0062
VAL 94 0.0062
MET 95 0.0079
GLU 96 0.0074
TYR 97 0.0060
VAL 98 0.0042
SER 99 0.0033
GLY 100 0.0033
GLY 101 0.0097
GLU 102 0.0088
LEU 103 0.0070
PHE 104 0.0083
ASP 105 0.0101
TYR 106 0.0104
ILE 107 0.0096
CYS 108 0.0118
LYS 109 0.0132
ASN 110 0.0119
GLY 111 0.0124
ARG 112 0.0106
LEU 113 0.0095
ASP 114 0.0092
GLU 115 0.0075
LYS 116 0.0054
GLU 117 0.0061
SER 118 0.0061
ARG 119 0.0038
ARG 120 0.0040
LEU 121 0.0047
PHE 122 0.0038
GLN 123 0.0031
GLN 124 0.0046
ILE 125 0.0050
LEU 126 0.0039
SER 127 0.0047
GLY 128 0.0051
VAL 129 0.0043
ASP 130 0.0042
TYR 131 0.0047
CYS 132 0.0040
HIS 133 0.0038
ARG 134 0.0042
HIS 135 0.0039
MET 136 0.0035
VAL 137 0.0033
VAL 138 0.0033
HIS 139 0.0032
ARG 140 0.0032
ASP 141 0.0049
LEU 142 0.0043
LYS 143 0.0045
PRO 144 0.0051
GLU 145 0.0060
ASN 146 0.0059
VAL 147 0.0053
LEU 148 0.0058
LEU 149 0.0055
ASP 150 0.0059
ALA 151 0.0077
HIS 152 0.0063
MET 153 0.0058
ASN 154 0.0054
ALA 155 0.0053
LYS 156 0.0056
ILE 157 0.0055
ALA 158 0.0057
ASP 159 0.0056
PHE 160 0.0055
GLY 161 0.0034
LEU 162 0.0030
SER 163 0.0031
ASN 164 0.0030
MET 165 0.0030
MET 166 0.0046
SER 167 0.0064
ASP 168 0.0076
GLY 169 0.0073
GLU 170 0.0061
PHE 171 0.0053
LEU 172 0.0052
ARG 173 0.0049
SER 175 0.0039
CYS 176 0.0035
GLY 177 0.0041
SER 178 0.0051
PRO 179 0.0057
ASN 180 0.0048
TYR 181 0.0045
ALA 182 0.0047
ALA 183 0.0042
PRO 184 0.0052
GLU 185 0.0041
VAL 186 0.0040
ILE 187 0.0054
SER 188 0.0055
GLY 189 0.0049
ARG 190 0.0036
LEU 191 0.0035
TYR 192 0.0035
ALA 193 0.0044
GLY 194 0.0040
PRO 195 0.0036
GLU 196 0.0031
VAL 197 0.0025
ASP 198 0.0032
ILE 199 0.0036
TRP 200 0.0033
SER 201 0.0040
SER 202 0.0038
GLY 203 0.0033
VAL 204 0.0038
ILE 205 0.0056
LEU 206 0.0047
TYR 207 0.0052
ALA 208 0.0068
LEU 209 0.0071
LEU 210 0.0087
CYS 211 0.0089
GLY 212 0.0105
THR 213 0.0083
LEU 214 0.0059
PRO 215 0.0040
PHE 216 0.0063
ASP 217 0.0106
ASP 218 0.0152
ASP 219 0.0206
HIS 220 0.0240
VAL 221 0.0222
PRO 222 0.0238
THR 223 0.0206
LEU 224 0.0144
PHE 225 0.0133
LYS 226 0.0150
LYS 227 0.0121
ILE 228 0.0089
CYS 229 0.0116
ASP 230 0.0132
GLY 231 0.0087
ILE 232 0.0070
PHE 233 0.0030
TYR 234 0.0040
THR 235 0.0068
PRO 236 0.0097
GLN 237 0.0119
TYR 238 0.0127
LEU 239 0.0099
ASN 240 0.0088
PRO 241 0.0081
SER 242 0.0064
VAL 243 0.0048
ILE 244 0.0052
SER 245 0.0034
LEU 246 0.0023
LEU 247 0.0027
LYS 248 0.0021
HIS 249 0.0016
MET 250 0.0030
LEU 251 0.0031
GLN 252 0.0038
VAL 253 0.0044
ASP 254 0.0049
PRO 255 0.0019
MET 256 0.0023
LYS 257 0.0029
ARG 258 0.0026
ALA 259 0.0028
THR 260 0.0027
ILE 261 0.0030
LYS 262 0.0029
ASP 263 0.0016
ILE 264 0.0008
ARG 265 0.0019
GLU 266 0.0029
HIS 267 0.0023
GLU 268 0.0032
TRP 269 0.0031
PHE 270 0.0011
LYS 271 0.0011
GLN 272 0.0020
ASP 273 0.0015
LEU 274 0.0013
PRO 275 0.0055
LYS 276 0.0069
TYR 277 0.0079
LEU 278 0.0063
PHE 279 0.0062
PRO 280 0.0097
GLU 281 0.0119
ASP 282 0.0108
LYS 395 0.0330
ALA 396 0.0256
LYS 397 0.0210
TRP 398 0.0127
HIS 399 0.0074
LEU 400 0.0040
GLY 401 0.0020
ILE 402 0.0026
ARG 403 0.0049
SER 404 0.0069
GLN 405 0.0120
SER 406 0.0112
ARG 407 0.0097
PRO 408 0.0064
ASN 409 0.0059
ASP 410 0.0083
ILE 411 0.0075
MET 412 0.0053
ALA 413 0.0079
GLU 414 0.0094
VAL 415 0.0069
CYS 416 0.0082
ARG 417 0.0109
ALA 418 0.0097
ILE 419 0.0085
LYS 420 0.0125
GLN 421 0.0135
LEU 422 0.0104
ASP 423 0.0123
TYR 424 0.0097
GLU 425 0.0119
TRP 426 0.0101
LYS 427 0.0109
VAL 428 0.0092
VAL 429 0.0095
ASN 430 0.0056
PRO 431 0.0038
TYR 432 0.0034
TYR 433 0.0044
LEU 434 0.0051
ARG 435 0.0061
VAL 436 0.0058
ARG 437 0.0057
ARG 438 0.0054
LYS 439 0.0054
ASN 440 0.0047
PRO 441 0.0058
VAL 442 0.0059
THR 443 0.0042
SER 444 0.0033
THR 445 0.0029
TYR 446 0.0030
SER 447 0.0028
LYS 448 0.0030
MET 449 0.0029
SER 450 0.0038
LEU 451 0.0030
GLN 452 0.0038
LEU 453 0.0043
TYR 454 0.0059
GLN 455 0.0077
VAL 456 0.0092
ASP 457 0.0125
SER 458 0.0143
ARG 459 0.0138
THR 460 0.0100
TYR 461 0.0078
LEU 462 0.0060
LEU 463 0.0038
ASP 464 0.0033
PHE 465 0.0028
ARG 466 0.0031
SER 467 0.0031
ILE 468 0.0034
ASP 469 0.0036
ASP 470 0.0032
GLU 471 0.0062
LEU 526 0.0048
THR 527 0.0053
PRO 528 0.0044
ARG 529 0.0040
PRO 530 0.0037
GLY 531 0.0040
SER 532 0.0035
HIS 533 0.0035
THR 534 0.0031
ILE 535 0.0034
GLU 536 0.0032
PHE 537 0.0030
PHE 538 0.0034
GLU 539 0.0035
MET 540 0.0031
CYS 541 0.0020
ALA 542 0.0021
ASN 543 0.0021
LEU 544 0.0021
ILE 545 0.0031
LYS 546 0.0023
ILE 547 0.0049
LEU 548 0.0067
ALA 549 0.0072
PRO 74 0.0074
ALA 75 0.0068
GLN 76 0.0057
ALA 77 0.0048
ARG 78 0.0045
PRO 79 0.0040
THR 80 0.0031
VAL 81 0.0029
PHE 82 0.0028
ARG 83 0.0034
TRP 84 0.0036
THR 85 0.0054
GLY 86 0.0060
GLY 87 0.0057
GLY 88 0.0045
LYS 89 0.0042
GLU 90 0.0031
VAL 91 0.0026
TYR 92 0.0020
LEU 93 0.0017
SER 94 0.0031
GLY 95 0.0030
SER 96 0.0045
PHE 97 0.0051
ASN 98 0.0055
ASN 99 0.0071
TRP 100 0.0057
SER 101 0.0058
LYS 102 0.0041
LEU 103 0.0025
PRO 104 0.0019
LEU 105 0.0022
THR 106 0.0031
ARG 107 0.0037
ASP 108 0.0044
HIS 109 0.0058
ASN 110 0.0054
ASN 111 0.0045
PHE 112 0.0031
VAL 113 0.0028
ALA 114 0.0026
ILE 115 0.0028
LEU 116 0.0029
ASP 117 0.0033
LEU 118 0.0038
PRO 119 0.0047
GLU 120 0.0054
GLY 121 0.0051
GLU 122 0.0042
HIS 123 0.0031
GLN 124 0.0020
TYR 125 0.0020
LYS 126 0.0030
PHE 127 0.0034
PHE 128 0.0046
VAL 129 0.0054
ASP 130 0.0064
GLY 131 0.0077
GLN 132 0.0081
TRP 133 0.0070
THR 134 0.0058
HIS 135 0.0048
ASP 136 0.0052
PRO 137 0.0068
SER 138 0.0072
GLU 139 0.0048
PRO 140 0.0045
ILE 141 0.0041
VAL 142 0.0038
THR 143 0.0042
SER 144 0.0123
GLN 145 0.0209
LEU 146 0.0174
GLY 147 0.0110
THR 148 0.0032
VAL 149 0.0046
ASN 150 0.0032
ASN 151 0.0023
ILE 152 0.0015
ILE 153 0.0026
GLN 154 0.0049
VAL 155 0.0044
LYS 156 0.0049
LYS 157 0.0050
THR 158 0.0054
ASP 159 0.0049
PHE 160 0.0033
GLU 161 0.0035
VAL 162 0.0051
PHE 163 0.0061
ASP 164 0.0049
ALA 165 0.0058
LEU 166 0.0076
MET 167 0.0077
VAL 168 0.0081
ASP 169 0.0098
SER 170 0.0116
GLN 171 0.0130
HIS 188 0.0218
GLN 189 0.0210
GLU 190 0.0173
PRO 191 0.0190
TYR 192 0.0168
VAL 193 0.0189
CYS 194 0.0173
LYS 195 0.0126
ARG 201 0.0071
ALA 202 0.0067
PRO 203 0.0058
PRO 204 0.0067
ILE 205 0.0071
LEU 206 0.0058
PRO 207 0.0057
PRO 208 0.0040
HIS 209 0.0052
LEU 210 0.0048
LEU 211 0.0043
GLN 212 0.0087
VAL 213 0.0080
ILE 214 0.0127
LEU 215 0.0137
ASN 216 0.0236
LYS 217 0.0317
ASP 218 0.0471
THR 219 0.0582
GLY 220 0.0742
ILE 221 0.1198
SER 222 0.1184
CYS 223 0.0781
ASP 224 0.0342
PRO 225 0.0376
ALA 226 0.0153
LEU 227 0.0165
LEU 228 0.0183
PRO 229 0.0223
GLU 230 0.0220
PRO 231 0.0098
ASN 232 0.0093
HIS 233 0.0103
VAL 234 0.0082
MET 235 0.0061
LEU 236 0.0058
ASN 237 0.0049
HIS 238 0.0039
LEU 239 0.0031
TYR 240 0.0034
ALA 241 0.0088
LEU 242 0.0114
SER 243 0.0145
ILE 244 0.0147
LYS 245 0.0169
ASP 246 0.0153
GLY 247 0.0137
VAL 248 0.0106
MET 249 0.0088
VAL 250 0.0068
LEU 251 0.0043
SER 252 0.0035
ALA 253 0.0035
THR 254 0.0052
HIS 255 0.0062
ARG 256 0.0100
TYR 257 0.0092
LYS 258 0.0109
LYS 259 0.0123
LYS 260 0.0110
TYR 261 0.0104
VAL 262 0.0072
THR 263 0.0057
THR 264 0.0033
LEU 265 0.0049
LEU 266 0.0051
TYR 267 0.0063
LYS 268 0.0069
PRO 269 0.0083
ILE 270 0.0094
ASN 25 0.0140
SER 26 0.0135
VAL 27 0.0160
TYR 28 0.0139
THR 29 0.0120
SER 30 0.0124
PHE 31 0.0125
MET 32 0.0105
LYS 33 0.0106
SER 34 0.0120
HIS 35 0.0080
ARG 36 0.0067
CYS 37 0.0079
TYR 38 0.0083
ASP 39 0.0094
LEU 40 0.0061
ILE 41 0.0071
PRO 42 0.0097
THR 43 0.0118
SER 44 0.0135
SER 45 0.0093
LYS 46 0.0065
LEU 47 0.0052
VAL 48 0.0055
VAL 49 0.0055
PHE 50 0.0051
ASP 51 0.0054
THR 52 0.0053
SER 53 0.0064
LEU 54 0.0069
GLN 55 0.0086
VAL 56 0.0084
LYS 57 0.0090
LYS 58 0.0082
ALA 59 0.0070
PHE 60 0.0071
PHE 61 0.0066
ALA 62 0.0063
LEU 63 0.0065
VAL 64 0.0062
THR 65 0.0085
ASN 66 0.0104
GLY 67 0.0085
VAL 68 0.0081
ARG 69 0.0054
ALA 70 0.0034
ALA 71 0.0034
PRO 72 0.0036
LEU 73 0.0035
TRP 74 0.0039
ASP 75 0.0042
SER 76 0.0051
LYS 77 0.0058
LYS 78 0.0051
GLN 79 0.0047
SER 80 0.0040
PHE 81 0.0034
VAL 82 0.0028
GLY 83 0.0027
MET 84 0.0026
LEU 85 0.0059
THR 86 0.0060
ILE 87 0.0063
THR 88 0.0070
ASP 89 0.0072
PHE 90 0.0092
ILE 91 0.0096
ASN 92 0.0110
ILE 93 0.0112
LEU 94 0.0108
HIS 95 0.0125
ARG 96 0.0141
TYR 97 0.0143
TYR 98 0.0134
LYS 99 0.0148
SER 100 0.0165
ALA 101 0.0160
LEU 102 0.0193
VAL 103 0.0189
GLN 104 0.0168
ILE 105 0.0149
TYR 106 0.0157
GLU 107 0.0144
LEU 108 0.0123
GLU 109 0.0132
GLU 110 0.0135
HIS 111 0.0118
LYS 112 0.0097
ILE 113 0.0085
GLU 114 0.0095
THR 115 0.0121
TRP 116 0.0119
ARG 117 0.0115
GLU 118 0.0131
VAL 119 0.0142
TYR 120 0.0143
LEU 121 0.0140
GLN 122 0.0157
ASP 123 0.0167
SER 124 0.0151
PHE 125 0.0100
LYS 126 0.0074
PRO 127 0.0029
LEU 128 0.0031
VAL 129 0.0080
CYS 130 0.0070
ILE 131 0.0067
SER 132 0.0065
PRO 133 0.0069
ASN 134 0.0062
ALA 135 0.0083
SER 136 0.0085
LEU 137 0.0084
PHE 138 0.0082
ASP 139 0.0082
ALA 140 0.0077
VAL 141 0.0077
SER 142 0.0082
SER 143 0.0085
LEU 144 0.0084
ILE 145 0.0089
ARG 146 0.0100
ASN 147 0.0103
LYS 148 0.0101
ILE 149 0.0092
HIS 150 0.0065
ARG 151 0.0053
LEU 152 0.0055
PRO 153 0.0050
VAL 154 0.0045
ILE 155 0.0050
ASP 156 0.0051
PRO 157 0.0050
GLU 158 0.0053
SER 159 0.0051
GLY 160 0.0044
ASN 161 0.0046
THR 162 0.0048
LEU 163 0.0049
TYR 164 0.0051
ILE 165 0.0058
LEU 166 0.0056
THR 167 0.0071
HIS 168 0.0081
LYS 169 0.0089
ARG 170 0.0117
ILE 171 0.0100
LEU 172 0.0116
LYS 173 0.0131
PHE 174 0.0114
LEU 175 0.0139
LYS 176 0.0163
LEU 177 0.0193
PHE 178 0.0181
ILE 179 0.0169
THR 180 0.0229
GLU 181 0.0255
PHE 182 0.0231
PRO 183 0.0216
LYS 184 0.0186
PRO 185 0.0146
GLU 186 0.0136
PHE 187 0.0137
MET 188 0.0143
SER 189 0.0153
LYS 190 0.0169
SER 191 0.0157
LEU 192 0.0151
GLU 193 0.0163
GLU 194 0.0182
LEU 195 0.0180
GLN 196 0.0161
ILE 197 0.0157
GLY 198 0.0143
THR 199 0.0133
TYR 200 0.0105
ALA 201 0.0136
ASN 202 0.0172
ILE 203 0.0148
ALA 204 0.0183
MET 205 0.0145
VAL 206 0.0135
ARG 207 0.0135
THR 208 0.0109
THR 209 0.0132
THR 210 0.0111
PRO 211 0.0088
VAL 212 0.0087
TYR 213 0.0105
VAL 214 0.0124
ALA 215 0.0095
LEU 216 0.0100
GLY 217 0.0114
ILE 218 0.0116
PHE 219 0.0114
VAL 220 0.0108
GLN 221 0.0119
HIS 222 0.0130
ARG 223 0.0131
VAL 224 0.0129
SER 225 0.0118
ALA 226 0.0098
LEU 227 0.0097
PRO 228 0.0084
VAL 229 0.0080
VAL 230 0.0114
ASP 231 0.0157
GLU 232 0.0216
LYS 233 0.0192
GLY 234 0.0159
ARG 235 0.0098
VAL 236 0.0072
VAL 237 0.0069
ASP 238 0.0048
ILE 239 0.0063
TYR 240 0.0068
SER 241 0.0073
LYS 242 0.0079
PHE 243 0.0071
ASP 244 0.0060
VAL 245 0.0065
ILE 246 0.0065
ASN 247 0.0064
LEU 248 0.0069
ALA 249 0.0073
ALA 250 0.0082
GLU 251 0.0090
LYS 252 0.0097
THR 253 0.0095
TYR 254 0.0095
ASN 255 0.0117
ASN 256 0.0097
LEU 257 0.0094
ASP 258 0.0090
VAL 259 0.0071
SER 260 0.0088
VAL 261 0.0074
THR 262 0.0064
LYS 263 0.0049
ALA 264 0.0032
LEU 265 0.0033
GLN 266 0.0065
HIS 267 0.0070
ARG 268 0.0113
SER 269 0.0134
HIS 270 0.0350
TYR 271 0.0318
PHE 272 0.0184
GLU 273 0.0168
GLY 274 0.0069
VAL 275 0.0044
LEU 276 0.0057
LYS 277 0.0069
CYS 278 0.0100
TYR 279 0.0106
LEU 280 0.0137
HIS 281 0.0142
GLU 282 0.0134
THR 283 0.0141
LEU 284 0.0147
GLU 285 0.0137
THR 286 0.0144
ILE 287 0.0142
ILE 288 0.0140
ASN 289 0.0149
ARG 290 0.0129
LEU 291 0.0130
VAL 292 0.0147
GLU 293 0.0156
ALA 294 0.0158
GLU 295 0.0132
VAL 296 0.0123
HIS 297 0.0105
ARG 298 0.0097
LEU 299 0.0097
VAL 300 0.0080
VAL 301 0.0091
VAL 302 0.0065
ASP 303 0.0058
GLU 304 0.0046
ASN 305 0.0027
ASP 306 0.0030
VAL 307 0.0053
VAL 308 0.0072
LYS 309 0.0092
GLY 310 0.0085
ILE 311 0.0095
VAL 312 0.0104
SER 313 0.0115
LEU 314 0.0126
SER 315 0.0115
ASP 316 0.0114
ILE 317 0.0114
LEU 318 0.0107
GLN 319 0.0099
ALA 320 0.0107
LEU 321 0.0112
VAL 322 0.0110
LEU 323 0.0112
THR 324 0.0122

If you find results from this site helpful for your research, please cite one of our papers:

K. Suhre & Y.H. Sanejouand, ElNemo: a normal mode web-server for protein movement analysis and the generation of templates for molecular replacement. Nucleic Acids Research, 32, W610-W614, 2004.
K. Suhre & Y.H. Sanejouand, On the potential of normal mode analysis for solving difficult molecular replacement problems. Acta Cryst. D vol.60, p796-799, 2004 © International Union of Crystallography.

elNémo is maintained by Yves-Henri Sanejouand.
It was developed by Karsten Suhre.
Between 2003 and 2014, it was hosted by IGS (Marseille).
Between 2015 and 2025, it was hosted by US2B (Nantes).
Last modification: april 24th, 2026.

Should you encounter any unexpected behaviour, please let us know. elNémo has been relocated. **Some cleaning from time to time** Sorry for the inconvenience.

*** Holo AMPK ***

<R2> analysis for 260711185133617066

--- normal mode 28 ---

Should you encounter any unexpected behaviour,
please let us know.
elNémo has been relocated.
Some cleaning from time to time
Sorry for the inconvenience.

* Holo AMPK *

<R²> analysis for 260711185133617066