Should you encounter any unexpected behaviour,
please let us know.
elNémo has been relocated.
Some cleaning from time to time
Sorry for the inconvenience.

* Holo AMPK *

<R²> analysis for 260711185133617066

--- normal mode 53 ---

This page gives a visualization of the normalized mean square displacement <R²> of all C-alpha atoms in the protein that are associated to this mode (black bars). The three components of the corresponding eigenvector are shown on the left (colored bars). Here is the raw data for <R2> and for the eigenvector (shift-click on the links for download).

X Y Z residue <R²> <R²>_max = 0.0734
GLY 11 0.0203
SER 12 0.0140
VAL 13 0.0125
LYS 14 0.0223
ILE 15 0.0316
GLY 16 0.0478
HIS 17 0.0463
TYR 18 0.0336
ILE 19 0.0316
LEU 20 0.0248
GLY 21 0.0281
ASP 22 0.0268
THR 23 0.0298
LEU 24 0.0250
GLY 25 0.0343
VAL 26 0.0429
GLY 27 0.0358
THR 28 0.0336
PHE 29 0.0310
GLY 30 0.0346
LYS 31 0.0387
VAL 32 0.0287
LYS 33 0.0245
VAL 34 0.0167
GLY 35 0.0208
LYS 36 0.0306
HIS 37 0.0402
GLU 38 0.0580
LEU 39 0.0641
THR 40 0.0536
GLY 41 0.0465
HIS 42 0.0335
LYS 43 0.0215
VAL 44 0.0140
ALA 45 0.0194
VAL 46 0.0228
LYS 47 0.0208
ILE 48 0.0224
LEU 49 0.0192
ASN 50 0.0210
ARG 51 0.0181
GLN 52 0.0221
LYS 53 0.0209
ILE 54 0.0137
ARG 55 0.0142
SER 56 0.0191
LEU 57 0.0158
ASP 58 0.0056
VAL 59 0.0076
VAL 60 0.0042
GLY 61 0.0056
LYS 62 0.0049
ILE 63 0.0057
ARG 64 0.0076
ARG 65 0.0063
GLU 66 0.0045
ILE 67 0.0072
GLN 68 0.0091
ASN 69 0.0073
LEU 70 0.0058
LYS 71 0.0102
LEU 72 0.0104
PHE 73 0.0079
ARG 74 0.0088
HIS 75 0.0068
PRO 76 0.0073
HIS 77 0.0076
ILE 78 0.0077
ILE 79 0.0096
LYS 80 0.0102
LEU 81 0.0135
TYR 82 0.0143
GLN 83 0.0152
VAL 84 0.0162
ILE 85 0.0185
SER 86 0.0113
THR 87 0.0109
PRO 88 0.0092
SER 89 0.0084
ASP 90 0.0090
ILE 91 0.0181
PHE 92 0.0189
MET 93 0.0166
VAL 94 0.0176
MET 95 0.0159
GLU 96 0.0104
TYR 97 0.0103
VAL 98 0.0100
SER 99 0.0101
GLY 100 0.0096
GLY 101 0.0031
GLU 102 0.0036
LEU 103 0.0031
PHE 104 0.0068
ASP 105 0.0100
TYR 106 0.0107
ILE 107 0.0089
CYS 108 0.0149
LYS 109 0.0188
ASN 110 0.0172
GLY 111 0.0092
ARG 112 0.0076
LEU 113 0.0054
ASP 114 0.0051
GLU 115 0.0045
LYS 116 0.0036
GLU 117 0.0029
SER 118 0.0024
ARG 119 0.0032
ARG 120 0.0051
LEU 121 0.0058
PHE 122 0.0051
GLN 123 0.0057
GLN 124 0.0063
ILE 125 0.0057
LEU 126 0.0047
SER 127 0.0045
GLY 128 0.0039
VAL 129 0.0029
ASP 130 0.0022
TYR 131 0.0011
CYS 132 0.0006
HIS 133 0.0029
ARG 134 0.0041
HIS 135 0.0044
MET 136 0.0052
VAL 137 0.0044
VAL 138 0.0051
HIS 139 0.0051
ARG 140 0.0060
ASP 141 0.0068
LEU 142 0.0053
LYS 143 0.0044
PRO 144 0.0037
GLU 145 0.0052
ASN 146 0.0051
VAL 147 0.0043
LEU 148 0.0046
LEU 149 0.0065
ASP 150 0.0087
ALA 151 0.0140
HIS 152 0.0137
MET 153 0.0103
ASN 154 0.0082
ALA 155 0.0053
LYS 156 0.0065
ILE 157 0.0066
ALA 158 0.0066
ASP 159 0.0073
PHE 160 0.0081
GLY 161 0.0065
LEU 162 0.0066
SER 163 0.0063
ASN 164 0.0063
MET 165 0.0069
MET 166 0.0036
SER 167 0.0033
ASP 168 0.0040
GLY 169 0.0036
GLU 170 0.0027
PHE 171 0.0020
LEU 172 0.0019
ARG 173 0.0020
SER 175 0.0042
CYS 176 0.0047
GLY 177 0.0046
SER 178 0.0043
PRO 179 0.0037
ASN 180 0.0043
TYR 181 0.0045
ALA 182 0.0043
ALA 183 0.0036
PRO 184 0.0027
GLU 185 0.0018
VAL 186 0.0015
ILE 187 0.0019
SER 188 0.0014
GLY 189 0.0007
ARG 190 0.0013
LEU 191 0.0016
TYR 192 0.0021
ALA 193 0.0027
GLY 194 0.0028
PRO 195 0.0043
GLU 196 0.0043
VAL 197 0.0041
ASP 198 0.0046
ILE 199 0.0049
TRP 200 0.0039
SER 201 0.0051
SER 202 0.0050
GLY 203 0.0033
VAL 204 0.0041
ILE 205 0.0053
LEU 206 0.0030
TYR 207 0.0038
ALA 208 0.0061
LEU 209 0.0053
LEU 210 0.0056
CYS 211 0.0077
GLY 212 0.0094
THR 213 0.0092
LEU 214 0.0075
PRO 215 0.0086
PHE 216 0.0047
ASP 217 0.0054
ASP 218 0.0071
ASP 219 0.0076
HIS 220 0.0127
VAL 221 0.0096
PRO 222 0.0134
THR 223 0.0130
LEU 224 0.0067
PHE 225 0.0045
LYS 226 0.0065
LYS 227 0.0061
ILE 228 0.0027
CYS 229 0.0026
ASP 230 0.0050
GLY 231 0.0044
ILE 232 0.0041
PHE 233 0.0062
TYR 234 0.0113
THR 235 0.0118
PRO 236 0.0148
GLN 237 0.0180
TYR 238 0.0156
LEU 239 0.0113
ASN 240 0.0105
PRO 241 0.0121
SER 242 0.0095
VAL 243 0.0052
ILE 244 0.0076
SER 245 0.0047
LEU 246 0.0025
LEU 247 0.0017
LYS 248 0.0027
HIS 249 0.0022
MET 250 0.0022
LEU 251 0.0016
GLN 252 0.0013
VAL 253 0.0013
ASP 254 0.0017
PRO 255 0.0020
MET 256 0.0022
LYS 257 0.0023
ARG 258 0.0026
ALA 259 0.0035
THR 260 0.0050
ILE 261 0.0049
LYS 262 0.0049
ASP 263 0.0046
ILE 264 0.0044
ARG 265 0.0066
GLU 266 0.0069
HIS 267 0.0052
GLU 268 0.0074
TRP 269 0.0048
PHE 270 0.0049
LYS 271 0.0082
GLN 272 0.0076
ASP 273 0.0089
LEU 274 0.0100
PRO 275 0.0184
LYS 276 0.0171
TYR 277 0.0127
LEU 278 0.0098
PHE 279 0.0086
PRO 280 0.0387
GLU 281 0.0734
ASP 282 0.0711
LYS 395 0.0101
ALA 396 0.0074
LYS 397 0.0066
TRP 398 0.0038
HIS 399 0.0024
LEU 400 0.0017
GLY 401 0.0024
ILE 402 0.0041
ARG 403 0.0047
SER 404 0.0060
GLN 405 0.0085
SER 406 0.0075
ARG 407 0.0047
PRO 408 0.0035
ASN 409 0.0065
ASP 410 0.0064
ILE 411 0.0049
MET 412 0.0048
ALA 413 0.0057
GLU 414 0.0049
VAL 415 0.0022
CYS 416 0.0021
ARG 417 0.0022
ALA 418 0.0017
ILE 419 0.0006
LYS 420 0.0022
GLN 421 0.0020
LEU 422 0.0014
ASP 423 0.0023
TYR 424 0.0023
GLU 425 0.0037
TRP 426 0.0023
LYS 427 0.0020
VAL 428 0.0011
VAL 429 0.0017
ASN 430 0.0044
PRO 431 0.0046
TYR 432 0.0041
TYR 433 0.0036
LEU 434 0.0030
ARG 435 0.0030
VAL 436 0.0015
ARG 437 0.0023
ARG 438 0.0025
LYS 439 0.0042
ASN 440 0.0048
PRO 441 0.0075
VAL 442 0.0078
THR 443 0.0066
SER 444 0.0077
THR 445 0.0056
TYR 446 0.0041
SER 447 0.0024
LYS 448 0.0023
MET 449 0.0023
SER 450 0.0030
LEU 451 0.0029
GLN 452 0.0025
LEU 453 0.0023
TYR 454 0.0023
GLN 455 0.0027
VAL 456 0.0049
ASP 457 0.0077
SER 458 0.0085
ARG 459 0.0095
THR 460 0.0059
TYR 461 0.0040
LEU 462 0.0035
LEU 463 0.0034
ASP 464 0.0026
PHE 465 0.0022
ARG 466 0.0024
SER 467 0.0022
ILE 468 0.0024
ASP 469 0.0026
ASP 470 0.0056
GLU 471 0.0089
LEU 526 0.0082
THR 527 0.0092
PRO 528 0.0079
ARG 529 0.0068
PRO 530 0.0071
GLY 531 0.0025
SER 532 0.0017
HIS 533 0.0011
THR 534 0.0009
ILE 535 0.0017
GLU 536 0.0009
PHE 537 0.0007
PHE 538 0.0009
GLU 539 0.0011
MET 540 0.0009
CYS 541 0.0006
ALA 542 0.0005
ASN 543 0.0008
LEU 544 0.0011
ILE 545 0.0009
LYS 546 0.0014
ILE 547 0.0016
LEU 548 0.0020
ALA 549 0.0021
PRO 74 0.0706
ALA 75 0.0517
GLN 76 0.0449
ALA 77 0.0388
ARG 78 0.0258
PRO 79 0.0100
THR 80 0.0089
VAL 81 0.0087
PHE 82 0.0089
ARG 83 0.0095
TRP 84 0.0148
THR 85 0.0140
GLY 86 0.0176
GLY 87 0.0235
GLY 88 0.0271
LYS 89 0.0419
GLU 90 0.0336
VAL 91 0.0252
TYR 92 0.0190
LEU 93 0.0140
SER 94 0.0101
GLY 95 0.0133
SER 96 0.0183
PHE 97 0.0230
ASN 98 0.0212
ASN 99 0.0190
TRP 100 0.0116
SER 101 0.0113
LYS 102 0.0124
LEU 103 0.0198
PRO 104 0.0180
LEU 105 0.0172
THR 106 0.0213
ARG 107 0.0205
ASP 108 0.0216
HIS 109 0.0245
ASN 110 0.0200
ASN 111 0.0171
PHE 112 0.0164
VAL 113 0.0169
ALA 114 0.0096
ILE 115 0.0103
LEU 116 0.0106
ASP 117 0.0140
LEU 118 0.0157
PRO 119 0.0206
GLU 120 0.0175
GLY 121 0.0159
GLU 122 0.0169
HIS 123 0.0199
GLN 124 0.0119
TYR 125 0.0091
LYS 126 0.0065
PHE 127 0.0122
PHE 128 0.0147
VAL 129 0.0267
ASP 130 0.0332
GLY 131 0.0268
GLN 132 0.0250
TRP 133 0.0163
THR 134 0.0142
HIS 135 0.0127
ASP 136 0.0185
PRO 137 0.0196
SER 138 0.0242
GLU 139 0.0191
PRO 140 0.0135
ILE 141 0.0076
VAL 142 0.0051
THR 143 0.0066
SER 144 0.0066
GLN 145 0.0077
LEU 146 0.0133
GLY 147 0.0089
THR 148 0.0018
VAL 149 0.0039
ASN 150 0.0031
ASN 151 0.0080
ILE 152 0.0114
ILE 153 0.0171
GLN 154 0.0197
VAL 155 0.0160
LYS 156 0.0184
LYS 157 0.0228
THR 158 0.0210
ASP 159 0.0155
PHE 160 0.0150
GLU 161 0.0149
VAL 162 0.0153
PHE 163 0.0154
ASP 164 0.0174
ALA 165 0.0195
LEU 166 0.0161
MET 167 0.0195
VAL 168 0.0249
ASP 169 0.0211
SER 170 0.0207
GLN 171 0.0293
HIS 188 0.0165
GLN 189 0.0159
GLU 190 0.0101
PRO 191 0.0108
TYR 192 0.0074
VAL 193 0.0089
CYS 194 0.0078
LYS 195 0.0046
ARG 201 0.0049
ALA 202 0.0030
PRO 203 0.0024
PRO 204 0.0036
ILE 205 0.0037
LEU 206 0.0022
PRO 207 0.0018
PRO 208 0.0017
HIS 209 0.0018
LEU 210 0.0021
LEU 211 0.0027
GLN 212 0.0039
VAL 213 0.0035
ILE 214 0.0045
LEU 215 0.0040
ASN 216 0.0061
LYS 217 0.0070
ASP 218 0.0075
THR 219 0.0072
GLY 220 0.0079
ILE 221 0.0120
SER 222 0.0124
CYS 223 0.0073
ASP 224 0.0047
PRO 225 0.0077
ALA 226 0.0033
LEU 227 0.0036
LEU 228 0.0044
PRO 229 0.0053
GLU 230 0.0056
PRO 231 0.0041
ASN 232 0.0041
HIS 233 0.0042
VAL 234 0.0034
MET 235 0.0028
LEU 236 0.0026
ASN 237 0.0025
HIS 238 0.0018
LEU 239 0.0014
TYR 240 0.0011
ALA 241 0.0020
LEU 242 0.0031
SER 243 0.0046
ILE 244 0.0048
LYS 245 0.0058
ASP 246 0.0039
GLY 247 0.0038
VAL 248 0.0023
MET 249 0.0019
VAL 250 0.0009
LEU 251 0.0009
SER 252 0.0014
ALA 253 0.0020
THR 254 0.0027
HIS 255 0.0033
ARG 256 0.0049
TYR 257 0.0039
LYS 258 0.0045
LYS 259 0.0051
LYS 260 0.0043
TYR 261 0.0045
VAL 262 0.0037
THR 263 0.0033
THR 264 0.0026
LEU 265 0.0020
LEU 266 0.0019
TYR 267 0.0011
LYS 268 0.0015
PRO 269 0.0018
ILE 270 0.0026
ASN 25 0.0066
SER 26 0.0046
VAL 27 0.0032
TYR 28 0.0026
THR 29 0.0045
SER 30 0.0049
PHE 31 0.0041
MET 32 0.0038
LYS 33 0.0049
SER 34 0.0053
HIS 35 0.0031
ARG 36 0.0021
CYS 37 0.0018
TYR 38 0.0023
ASP 39 0.0031
LEU 40 0.0014
ILE 41 0.0020
PRO 42 0.0031
THR 43 0.0042
SER 44 0.0044
SER 45 0.0038
LYS 46 0.0035
LEU 47 0.0030
VAL 48 0.0026
VAL 49 0.0023
PHE 50 0.0025
ASP 51 0.0025
THR 52 0.0028
SER 53 0.0026
LEU 54 0.0024
GLN 55 0.0023
VAL 56 0.0023
LYS 57 0.0019
LYS 58 0.0020
ALA 59 0.0023
PHE 60 0.0020
PHE 61 0.0020
ALA 62 0.0024
LEU 63 0.0025
VAL 64 0.0023
THR 65 0.0029
ASN 66 0.0032
GLY 67 0.0030
VAL 68 0.0026
ARG 69 0.0020
ALA 70 0.0025
ALA 71 0.0024
PRO 72 0.0023
LEU 73 0.0024
TRP 74 0.0023
ASP 75 0.0027
SER 76 0.0029
LYS 77 0.0032
LYS 78 0.0026
GLN 79 0.0023
SER 80 0.0023
PHE 81 0.0022
VAL 82 0.0023
GLY 83 0.0025
MET 84 0.0026
LEU 85 0.0019
THR 86 0.0018
ILE 87 0.0019
THR 88 0.0017
ASP 89 0.0017
PHE 90 0.0016
ILE 91 0.0014
ASN 92 0.0012
ILE 93 0.0012
LEU 94 0.0011
HIS 95 0.0006
ARG 96 0.0007
TYR 97 0.0009
TYR 98 0.0006
LYS 99 0.0011
SER 100 0.0013
ALA 101 0.0015
LEU 102 0.0021
VAL 103 0.0019
GLN 104 0.0018
ILE 105 0.0012
TYR 106 0.0017
GLU 107 0.0018
LEU 108 0.0018
GLU 109 0.0020
GLU 110 0.0019
HIS 111 0.0022
LYS 112 0.0025
ILE 113 0.0027
GLU 114 0.0031
THR 115 0.0027
TRP 116 0.0025
ARG 117 0.0026
GLU 118 0.0030
VAL 119 0.0031
TYR 120 0.0039
LEU 121 0.0043
GLN 122 0.0065
ASP 123 0.0083
SER 124 0.0066
PHE 125 0.0070
LYS 126 0.0051
PRO 127 0.0046
LEU 128 0.0032
VAL 129 0.0025
CYS 130 0.0010
ILE 131 0.0007
SER 132 0.0010
PRO 133 0.0014
ASN 134 0.0009
ALA 135 0.0027
SER 136 0.0030
LEU 137 0.0026
PHE 138 0.0030
ASP 139 0.0026
ALA 140 0.0019
VAL 141 0.0022
SER 142 0.0024
SER 143 0.0017
LEU 144 0.0014
ILE 145 0.0023
ARG 146 0.0024
ASN 147 0.0018
LYS 148 0.0020
ILE 149 0.0011
HIS 150 0.0005
ARG 151 0.0007
LEU 152 0.0008
PRO 153 0.0014
VAL 154 0.0017
ILE 155 0.0024
ASP 156 0.0011
PRO 157 0.0018
GLU 158 0.0017
SER 159 0.0014
GLY 160 0.0019
ASN 161 0.0019
THR 162 0.0019
LEU 163 0.0018
TYR 164 0.0017
ILE 165 0.0008
LEU 166 0.0005
THR 167 0.0004
HIS 168 0.0005
LYS 169 0.0008
ARG 170 0.0009
ILE 171 0.0011
LEU 172 0.0011
LYS 173 0.0014
PHE 174 0.0016
LEU 175 0.0014
LYS 176 0.0012
LEU 177 0.0024
PHE 178 0.0020
ILE 179 0.0011
THR 180 0.0046
GLU 181 0.0050
PHE 182 0.0024
PRO 183 0.0018
LYS 184 0.0037
PRO 185 0.0050
GLU 186 0.0063
PHE 187 0.0049
MET 188 0.0041
SER 189 0.0060
LYS 190 0.0042
SER 191 0.0023
LEU 192 0.0024
GLU 193 0.0031
GLU 194 0.0035
LEU 195 0.0034
GLN 196 0.0036
ILE 197 0.0029
GLY 198 0.0026
THR 199 0.0041
TYR 200 0.0050
ALA 201 0.0070
ASN 202 0.0063
ILE 203 0.0030
ALA 204 0.0013
MET 205 0.0015
VAL 206 0.0011
ARG 207 0.0017
THR 208 0.0023
THR 209 0.0026
THR 210 0.0016
PRO 211 0.0013
VAL 212 0.0007
TYR 213 0.0008
VAL 214 0.0013
ALA 215 0.0008
LEU 216 0.0009
GLY 217 0.0015
ILE 218 0.0016
PHE 219 0.0016
VAL 220 0.0020
GLN 221 0.0026
HIS 222 0.0026
ARG 223 0.0027
VAL 224 0.0025
SER 225 0.0022
ALA 226 0.0016
LEU 227 0.0010
PRO 228 0.0007
VAL 229 0.0008
VAL 230 0.0018
ASP 231 0.0045
GLU 232 0.0064
LYS 233 0.0049
GLY 234 0.0027
ARG 235 0.0017
VAL 236 0.0017
VAL 237 0.0026
ASP 238 0.0021
ILE 239 0.0016
TYR 240 0.0007
SER 241 0.0009
LYS 242 0.0008
PHE 243 0.0010
ASP 244 0.0007
VAL 245 0.0010
ILE 246 0.0012
ASN 247 0.0012
LEU 248 0.0010
ALA 249 0.0012
ALA 250 0.0016
GLU 251 0.0012
LYS 252 0.0012
THR 253 0.0008
TYR 254 0.0010
ASN 255 0.0010
ASN 256 0.0010
LEU 257 0.0006
ASP 258 0.0012
VAL 259 0.0012
SER 260 0.0014
VAL 261 0.0012
THR 262 0.0013
LYS 263 0.0014
ALA 264 0.0012
LEU 265 0.0012
GLN 266 0.0010
HIS 267 0.0017
ARG 268 0.0014
SER 269 0.0009
HIS 270 0.0038
TYR 271 0.0020
PHE 272 0.0021
GLU 273 0.0045
GLY 274 0.0063
VAL 275 0.0024
LEU 276 0.0021
LYS 277 0.0025
CYS 278 0.0027
TYR 279 0.0034
LEU 280 0.0028
HIS 281 0.0022
GLU 282 0.0021
THR 283 0.0024
LEU 284 0.0027
GLU 285 0.0028
THR 286 0.0028
ILE 287 0.0019
ILE 288 0.0017
ASN 289 0.0025
ARG 290 0.0016
LEU 291 0.0015
VAL 292 0.0013
GLU 293 0.0017
ALA 294 0.0021
GLU 295 0.0014
VAL 296 0.0015
HIS 297 0.0016
ARG 298 0.0017
LEU 299 0.0017
VAL 300 0.0026
VAL 301 0.0036
VAL 302 0.0042
ASP 303 0.0053
GLU 304 0.0055
ASN 305 0.0046
ASP 306 0.0036
VAL 307 0.0039
VAL 308 0.0038
LYS 309 0.0048
GLY 310 0.0033
ILE 311 0.0028
VAL 312 0.0020
SER 313 0.0018
LEU 314 0.0013
SER 315 0.0011
ASP 316 0.0010
ILE 317 0.0009
LEU 318 0.0008
GLN 319 0.0008
ALA 320 0.0028
LEU 321 0.0019
VAL 322 0.0035
LEU 323 0.0050
THR 324 0.0065

If you find results from this site helpful for your research, please cite one of our papers:

K. Suhre & Y.H. Sanejouand, ElNemo: a normal mode web-server for protein movement analysis and the generation of templates for molecular replacement. Nucleic Acids Research, 32, W610-W614, 2004.
K. Suhre & Y.H. Sanejouand, On the potential of normal mode analysis for solving difficult molecular replacement problems. Acta Cryst. D vol.60, p796-799, 2004 © International Union of Crystallography.

elNémo is maintained by Yves-Henri Sanejouand.
It was developed by Karsten Suhre.
Between 2003 and 2014, it was hosted by IGS (Marseille).
Between 2015 and 2025, it was hosted by US2B (Nantes).
Last modification: april 24th, 2026.

Should you encounter any unexpected behaviour, please let us know. elNémo has been relocated. **Some cleaning from time to time** Sorry for the inconvenience.

*** Holo AMPK ***

<R2> analysis for 260711185133617066

--- normal mode 53 ---

Should you encounter any unexpected behaviour,
please let us know.
elNémo has been relocated.
Some cleaning from time to time
Sorry for the inconvenience.

* Holo AMPK *

<R²> analysis for 260711185133617066