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***  Holo AMPK  ***

<R2> analysis for 260711185133617066

---  normal mode 91  ---

This page gives a visualization of the normalized mean square displacement <R2> of all C-alpha atoms in the protein that are associated to this mode (black bars). The three components of the corresponding eigenvector are shown on the left (colored bars). Here is the raw data for <R2> and for the eigenvector (shift-click on the links for download).

XYZresidue<R2><R2>max = 0.0359
GLY 110.0086
SER 120.0080
VAL 130.0066
LYS 140.0046
ILE 150.0029
GLY 160.0014
HIS 170.0017
TYR 180.0022
ILE 190.0037
LEU 200.0045
GLY 210.0039
ASP 220.0064
THR 230.0082
LEU 240.0091
GLY 250.0124
VAL 260.0130
GLY 270.0117
THR 280.0098
PHE 290.0054
GLY 300.0046
LYS 310.0069
VAL 320.0058
LYS 330.0030
VAL 340.0018
GLY 350.0026
LYS 360.0059
HIS 370.0033
GLU 380.0063
LEU 390.0066
THR 400.0040
GLY 410.0047
HIS 420.0045
LYS 430.0045
VAL 440.0036
ALA 450.0033
VAL 460.0043
LYS 470.0036
ILE 480.0029
LEU 490.0031
ASN 500.0024
ARG 510.0042
GLN 520.0047
LYS 530.0037
ILE 540.0028
ARG 550.0037
SER 560.0066
LEU 570.0057
ASP 580.0047
VAL 590.0042
VAL 600.0048
GLY 610.0037
LYS 620.0037
ILE 630.0044
ARG 640.0047
ARG 650.0051
GLU 660.0044
ILE 670.0064
GLN 680.0076
ASN 690.0075
LEU 700.0078
LYS 710.0108
LEU 720.0121
PHE 730.0078
ARG 740.0100
HIS 750.0057
PRO 760.0046
HIS 770.0059
ILE 780.0042
ILE 790.0068
LYS 800.0083
LEU 810.0082
TYR 820.0074
GLN 830.0059
VAL 840.0053
ILE 850.0047
SER 860.0036
THR 870.0035
PRO 880.0040
SER 890.0044
ASP 900.0044
ILE 910.0040
PHE 920.0042
MET 930.0044
VAL 940.0051
MET 950.0057
GLU 960.0040
TYR 970.0042
VAL 980.0057
SER 990.0066
GLY 1000.0084
GLY 1010.0086
GLU 1020.0097
LEU 1030.0112
PHE 1040.0112
ASP 1050.0077
TYR 1060.0055
ILE 1070.0077
CYS 1080.0138
LYS 1090.0142
ASN 1100.0099
GLY 1110.0046
ARG 1120.0038
LEU 1130.0052
ASP 1140.0057
GLU 1150.0072
LYS 1160.0076
GLU 1170.0089
SER 1180.0095
ARG 1190.0091
ARG 1200.0099
LEU 1210.0096
PHE 1220.0100
GLN 1230.0093
GLN 1240.0098
ILE 1250.0110
LEU 1260.0123
SER 1270.0101
GLY 1280.0088
VAL 1290.0102
ASP 1300.0103
TYR 1310.0073
CYS 1320.0064
HIS 1330.0078
ARG 1340.0098
HIS 1350.0092
MET 1360.0094
VAL 1370.0070
VAL 1380.0041
HIS 1390.0030
ARG 1400.0016
ASP 1410.0059
LEU 1420.0076
LYS 1430.0100
PRO 1440.0128
GLU 1450.0126
ASN 1460.0099
VAL 1470.0107
LEU 1480.0092
LEU 1490.0104
ASP 1500.0109
ALA 1510.0149
HIS 1520.0164
MET 1530.0158
ASN 1540.0148
ALA 1550.0136
LYS 1560.0084
ILE 1570.0068
ALA 1580.0063
ASP 1590.0052
PHE 1600.0043
GLY 1610.0076
LEU 1620.0047
SER 1630.0040
ASN 1640.0035
MET 1650.0060
MET 1660.0100
SER 1670.0127
ASP 1680.0144
GLY 1690.0124
GLU 1700.0098
PHE 1710.0049
LEU 1720.0077
ARG 1730.0139
SER 1750.0074
CYS 1760.0060
GLY 1770.0073
SER 1780.0099
PRO 1790.0101
ASN 1800.0096
TYR 1810.0104
ALA 1820.0071
ALA 1830.0082
PRO 1840.0072
GLU 1850.0124
VAL 1860.0064
ILE 1870.0067
SER 1880.0130
GLY 1890.0132
ARG 1900.0173
LEU 1910.0131
TYR 1920.0109
ALA 1930.0091
GLY 1940.0081
PRO 1950.0099
GLU 1960.0107
VAL 1970.0093
ASP 1980.0087
ILE 1990.0102
TRP 2000.0056
SER 2010.0052
SER 2020.0068
GLY 2030.0077
VAL 2040.0072
ILE 2050.0059
LEU 2060.0060
TYR 2070.0066
ALA 2080.0060
LEU 2090.0051
LEU 2100.0070
CYS 2110.0047
GLY 2120.0045
THR 2130.0079
LEU 2140.0117
PRO 2150.0175
PHE 2160.0172
ASP 2170.0197
ASP 2180.0195
ASP 2190.0241
HIS 2200.0236
VAL 2210.0230
PRO 2220.0208
THR 2230.0206
LEU 2240.0217
PHE 2250.0146
LYS 2260.0136
LYS 2270.0161
ILE 2280.0165
CYS 2290.0141
ASP 2300.0159
GLY 2310.0151
ILE 2320.0104
PHE 2330.0079
TYR 2340.0061
THR 2350.0078
PRO 2360.0099
GLN 2370.0150
TYR 2380.0156
LEU 2390.0140
ASN 2400.0098
PRO 2410.0091
SER 2420.0093
VAL 2430.0081
ILE 2440.0071
SER 2450.0030
LEU 2460.0056
LEU 2470.0072
LYS 2480.0075
HIS 2490.0082
MET 2500.0086
LEU 2510.0077
GLN 2520.0084
VAL 2530.0080
ASP 2540.0090
PRO 2550.0137
MET 2560.0157
LYS 2570.0155
ARG 2580.0138
ALA 2590.0140
THR 2600.0216
ILE 2610.0215
LYS 2620.0223
ASP 2630.0195
ILE 2640.0171
ARG 2650.0217
GLU 2660.0231
HIS 2670.0179
GLU 2680.0140
TRP 2690.0087
PHE 2700.0117
LYS 2710.0134
GLN 2720.0092
ASP 2730.0079
LEU 2740.0096
PRO 2750.0096
LYS 2760.0112
TYR 2770.0122
LEU 2780.0127
PHE 2790.0143
PRO 2800.0142
GLU 2810.0164
ASP 2820.0206
LYS 3950.0241
ALA 3960.0237
LYS 3970.0208
TRP 3980.0190
HIS 3990.0176
LEU 4000.0096
GLY 4010.0093
ILE 4020.0078
ARG 4030.0056
SER 4040.0047
GLN 4050.0138
SER 4060.0106
ARG 4070.0105
PRO 4080.0070
ASN 4090.0121
ASP 4100.0046
ILE 4110.0029
MET 4120.0061
ALA 4130.0073
GLU 4140.0058
VAL 4150.0121
CYS 4160.0093
ARG 4170.0093
ALA 4180.0108
ILE 4190.0089
LYS 4200.0081
GLN 4210.0155
LEU 4220.0136
ASP 4230.0097
TYR 4240.0040
GLU 4250.0046
TRP 4260.0062
LYS 4270.0079
VAL 4280.0093
VAL 4290.0108
ASN 4300.0106
PRO 4310.0141
TYR 4320.0110
TYR 4330.0072
LEU 4340.0087
ARG 4350.0078
VAL 4360.0050
ARG 4370.0040
ARG 4380.0030
LYS 4390.0059
ASN 4400.0048
PRO 4410.0062
VAL 4420.0062
THR 4430.0113
SER 4440.0124
THR 4450.0102
TYR 4460.0072
SER 4470.0065
LYS 4480.0058
MET 4490.0075
SER 4500.0052
LEU 4510.0055
GLN 4520.0058
LEU 4530.0074
TYR 4540.0092
GLN 4550.0120
VAL 4560.0144
ASP 4570.0091
SER 4580.0090
ARG 4590.0190
THR 4600.0040
TYR 4610.0033
LEU 4620.0039
LEU 4630.0036
ASP 4640.0040
PHE 4650.0049
ARG 4660.0048
SER 4670.0047
ILE 4680.0050
ASP 4690.0056
ASP 4700.0179
GLU 4710.0185
LEU 5260.0288
THR 5270.0359
PRO 5280.0342
ARG 5290.0232
PRO 5300.0188
GLY 5310.0146
SER 5320.0136
HIS 5330.0114
THR 5340.0113
ILE 5350.0122
GLU 5360.0043
PHE 5370.0018
PHE 5380.0039
GLU 5390.0049
MET 5400.0026
CYS 5410.0050
ALA 5420.0077
ASN 5430.0106
LEU 5440.0104
ILE 5450.0122
LYS 5460.0249
ILE 5470.0266
LEU 5480.0277
ALA 5490.0339
PRO 740.0091
ALA 750.0092
GLN 760.0076
ALA 770.0071
ARG 780.0080
PRO 790.0047
THR 800.0051
VAL 810.0047
PHE 820.0052
ARG 830.0048
TRP 840.0046
THR 850.0070
GLY 860.0078
GLY 870.0083
GLY 880.0060
LYS 890.0115
GLU 900.0090
VAL 910.0051
TYR 920.0033
LEU 930.0017
SER 940.0021
GLY 950.0044
SER 960.0058
PHE 970.0052
ASN 980.0024
ASN 990.0037
TRP 1000.0034
SER 1010.0019
LYS 1020.0030
LEU 1030.0046
PRO 1040.0069
LEU 1050.0053
THR 1060.0062
ARG 1070.0070
ASP 1080.0116
HIS 1090.0146
ASN 1100.0135
ASN 1110.0111
PHE 1120.0066
VAL 1130.0103
ALA 1140.0064
ILE 1150.0054
LEU 1160.0063
ASP 1170.0065
LEU 1180.0075
PRO 1190.0058
GLU 1200.0063
GLY 1210.0049
GLU 1220.0073
HIS 1230.0095
GLN 1240.0090
TYR 1250.0063
LYS 1260.0026
PHE 1270.0017
PHE 1280.0021
VAL 1290.0071
ASP 1300.0070
GLY 1310.0037
GLN 1320.0069
TRP 1330.0065
THR 1340.0100
HIS 1350.0067
ASP 1360.0175
PRO 1370.0235
SER 1380.0317
GLU 1390.0214
PRO 1400.0156
ILE 1410.0074
VAL 1420.0095
THR 1430.0125
SER 1440.0053
GLN 1450.0072
LEU 1460.0097
GLY 1470.0157
THR 1480.0162
VAL 1490.0049
ASN 1500.0057
ASN 1510.0068
ILE 1520.0105
ILE 1530.0136
GLN 1540.0048
VAL 1550.0043
LYS 1560.0041
LYS 1570.0046
THR 1580.0053
ASP 1590.0050
PHE 1600.0041
GLU 1610.0045
VAL 1620.0054
PHE 1630.0062
ASP 1640.0090
ALA 1650.0085
LEU 1660.0077
MET 1670.0080
VAL 1680.0083
ASP 1690.0096
SER 1700.0058
GLN 1710.0172
HIS 1880.0131
GLN 1890.0114
GLU 1900.0072
PRO 1910.0070
TYR 1920.0059
VAL 1930.0088
CYS 1940.0091
LYS 1950.0079
ARG 2010.0281
ALA 2020.0229
PRO 2030.0182
PRO 2040.0210
ILE 2050.0209
LEU 2060.0126
PRO 2070.0098
PRO 2080.0152
HIS 2090.0131
LEU 2100.0121
LEU 2110.0108
GLN 2120.0114
VAL 2130.0143
ILE 2140.0154
LEU 2150.0185
ASN 2160.0225
LYS 2170.0165
ASP 2180.0169
THR 2190.0123
GLY 2200.0132
ILE 2210.0119
SER 2220.0112
CYS 2230.0180
ASP 2240.0299
PRO 2250.0309
ALA 2260.0202
LEU 2270.0183
LEU 2280.0151
PRO 2290.0141
GLU 2300.0138
PRO 2310.0153
ASN 2320.0150
HIS 2330.0146
VAL 2340.0138
MET 2350.0136
LEU 2360.0118
ASN 2370.0121
HIS 2380.0105
LEU 2390.0110
TYR 2400.0113
ALA 2410.0232
LEU 2420.0204
SER 2430.0275
ILE 2440.0230
LYS 2450.0209
ASP 2460.0093
GLY 2470.0079
VAL 2480.0081
MET 2490.0121
VAL 2500.0121
LEU 2510.0113
SER 2520.0109
ALA 2530.0102
THR 2540.0105
HIS 2550.0110
ARG 2560.0131
TYR 2570.0082
LYS 2580.0070
LYS 2590.0131
LYS 2600.0158
TYR 2610.0090
VAL 2620.0088
THR 2630.0084
THR 2640.0087
LEU 2650.0091
LEU 2660.0056
TYR 2670.0060
LYS 2680.0072
PRO 2690.0077
ILE 2700.0081
ASN 250.0073
SER 260.0054
VAL 270.0063
TYR 280.0051
THR 290.0049
SER 300.0041
PHE 310.0029
MET 320.0034
LYS 330.0057
SER 340.0060
HIS 350.0044
ARG 360.0086
CYS 370.0126
TYR 380.0109
ASP 390.0074
LEU 400.0069
ILE 410.0068
PRO 420.0099
THR 430.0109
SER 440.0131
SER 450.0084
LYS 460.0075
LEU 470.0065
VAL 480.0089
VAL 490.0090
PHE 500.0055
ASP 510.0074
THR 520.0082
SER 530.0106
LEU 540.0096
GLN 550.0035
VAL 560.0035
LYS 570.0051
LYS 580.0073
ALA 590.0074
PHE 600.0073
PHE 610.0108
ALA 620.0134
LEU 630.0131
VAL 640.0143
THR 650.0181
ASN 660.0203
GLY 670.0182
VAL 680.0179
ARG 690.0153
ALA 700.0103
ALA 710.0085
PRO 720.0085
LEU 730.0093
TRP 740.0114
ASP 750.0216
SER 760.0195
LYS 770.0277
LYS 780.0285
GLN 790.0196
SER 800.0212
PHE 810.0175
VAL 820.0179
GLY 830.0152
MET 840.0129
LEU 850.0067
THR 860.0073
ILE 870.0074
THR 880.0077
ASP 890.0070
PHE 900.0048
ILE 910.0061
ASN 920.0066
ILE 930.0058
LEU 940.0058
HIS 950.0079
ARG 960.0074
TYR 970.0066
TYR 980.0060
LYS 990.0041
SER 1000.0085
ALA 1010.0082
LEU 1020.0091
VAL 1030.0091
GLN 1040.0084
ILE 1050.0040
TYR 1060.0043
GLU 1070.0046
LEU 1080.0040
GLU 1090.0034
GLU 1100.0041
HIS 1110.0064
LYS 1120.0061
ILE 1130.0097
GLU 1140.0094
THR 1150.0147
TRP 1160.0148
ARG 1170.0142
GLU 1180.0142
VAL 1190.0147
TYR 1200.0195
LEU 1210.0156
GLN 1220.0213
ASP 1230.0175
SER 1240.0116
PHE 1250.0234
LYS 1260.0109
PRO 1270.0070
LEU 1280.0118
VAL 1290.0169
CYS 1300.0215
ILE 1310.0199
SER 1320.0209
PRO 1330.0194
ASN 1340.0183
ALA 1350.0161
SER 1360.0118
LEU 1370.0081
PHE 1380.0069
ASP 1390.0105
ALA 1400.0113
VAL 1410.0054
SER 1420.0128
SER 1430.0138
LEU 1440.0069
ILE 1450.0192
ARG 1460.0290
ASN 1470.0215
LYS 1480.0174
ILE 1490.0069
HIS 1500.0085
ARG 1510.0106
LEU 1520.0107
PRO 1530.0159
VAL 1540.0184
ILE 1550.0265
ASP 1560.0303
PRO 1570.0277
GLU 1580.0315
SER 1590.0307
GLY 1600.0233
ASN 1610.0217
THR 1620.0187
LEU 1630.0153
TYR 1640.0132
ILE 1650.0116
LEU 1660.0077
THR 1670.0057
HIS 1680.0038
LYS 1690.0069
ARG 1700.0046
ILE 1710.0021
LEU 1720.0037
LYS 1730.0058
PHE 1740.0045
LEU 1750.0025
LYS 1760.0055
LEU 1770.0067
PHE 1780.0070
ILE 1790.0078
THR 1800.0257
GLU 1810.0223
PHE 1820.0054
PRO 1830.0115
LYS 1840.0257
PRO 1850.0201
GLU 1860.0184
PHE 1870.0112
MET 1880.0096
SER 1890.0137
LYS 1900.0104
SER 1910.0095
LEU 1920.0073
GLU 1930.0081
GLU 1940.0096
LEU 1950.0091
GLN 1960.0078
ILE 1970.0065
GLY 1980.0069
THR 1990.0065
TYR 2000.0099
ALA 2010.0144
ASN 2020.0162
ILE 2030.0111
ALA 2040.0134
MET 2050.0056
VAL 2060.0025
ARG 2070.0017
THR 2080.0042
THR 2090.0057
THR 2100.0049
PRO 2110.0050
VAL 2120.0032
TYR 2130.0047
VAL 2140.0056
ALA 2150.0058
LEU 2160.0052
GLY 2170.0118
ILE 2180.0108
PHE 2190.0102
VAL 2200.0204
GLN 2210.0284
HIS 2220.0260
ARG 2230.0270
VAL 2240.0223
SER 2250.0137
ALA 2260.0115
LEU 2270.0089
PRO 2280.0081
VAL 2290.0067
VAL 2300.0069
ASP 2310.0087
GLU 2320.0153
LYS 2330.0161
GLY 2340.0120
ARG 2350.0090
VAL 2360.0074
VAL 2370.0072
ASP 2380.0084
ILE 2390.0097
TYR 2400.0077
SER 2410.0084
LYS 2420.0083
PHE 2430.0093
ASP 2440.0085
VAL 2450.0037
ILE 2460.0038
ASN 2470.0041
LEU 2480.0015
ALA 2490.0032
ALA 2500.0073
GLU 2510.0057
LYS 2520.0050
THR 2530.0023
TYR 2540.0024
ASN 2550.0057
ASN 2560.0055
LEU 2570.0056
ASP 2580.0075
VAL 2590.0066
SER 2600.0055
VAL 2610.0056
THR 2620.0099
LYS 2630.0092
ALA 2640.0076
LEU 2650.0113
GLN 2660.0117
HIS 2670.0122
ARG 2680.0118
SER 2690.0117
HIS 2700.0177
TYR 2710.0127
PHE 2720.0101
GLU 2730.0096
GLY 2740.0130
VAL 2750.0048
LEU 2760.0062
LYS 2770.0051
CYS 2780.0062
TYR 2790.0050
LEU 2800.0074
HIS 2810.0082
GLU 2820.0072
THR 2830.0066
LEU 2840.0054
GLU 2850.0041
THR 2860.0036
ILE 2870.0037
ILE 2880.0047
ASN 2890.0036
ARG 2900.0046
LEU 2910.0050
VAL 2920.0071
GLU 2930.0070
ALA 2940.0066
GLU 2950.0069
VAL 2960.0046
HIS 2970.0019
ARG 2980.0021
LEU 2990.0036
VAL 3000.0055
VAL 3010.0060
VAL 3020.0042
ASP 3030.0055
GLU 3040.0098
ASN 3050.0134
ASP 3060.0101
VAL 3070.0076
VAL 3080.0045
LYS 3090.0050
GLY 3100.0069
ILE 3110.0053
VAL 3120.0064
SER 3130.0051
LEU 3140.0064
SER 3150.0081
ASP 3160.0106
ILE 3170.0100
LEU 3180.0076
GLN 3190.0091
ALA 3200.0075
LEU 3210.0030
VAL 3220.0038
LEU 3230.0073
THR 3240.0089

If you find results from this site helpful for your research, please cite one of our papers:

elNémo is maintained by Yves-Henri Sanejouand.
It was developed by Karsten Suhre.
Between 2003 and 2014, it was hosted by IGS (Marseille).
Between 2015 and 2025, it was hosted by US2B (Nantes).
Last modification: april 24th, 2026.