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***  Holo AMPK  ***

<R2> analysis for 260711185133617066

---  normal mode 96  ---

This page gives a visualization of the normalized mean square displacement <R2> of all C-alpha atoms in the protein that are associated to this mode (black bars). The three components of the corresponding eigenvector are shown on the left (colored bars). Here is the raw data for <R2> and for the eigenvector (shift-click on the links for download).

XYZresidue<R2><R2>max = 0.0547
GLY 110.0035
SER 120.0012
VAL 130.0050
LYS 140.0052
ILE 150.0083
GLY 160.0226
HIS 170.0121
TYR 180.0103
ILE 190.0101
LEU 200.0173
GLY 210.0210
ASP 220.0215
THR 230.0218
LEU 240.0223
GLY 250.0339
VAL 260.0505
GLY 270.0398
THR 280.0264
PHE 290.0144
GLY 300.0207
LYS 310.0227
VAL 320.0188
LYS 330.0109
VAL 340.0111
GLY 350.0171
LYS 360.0283
HIS 370.0130
GLU 380.0300
LEU 390.0313
THR 400.0138
GLY 410.0272
HIS 420.0327
LYS 430.0271
VAL 440.0233
ALA 450.0179
VAL 460.0097
LYS 470.0116
ILE 480.0104
LEU 490.0126
ASN 500.0118
ARG 510.0101
GLN 520.0156
LYS 530.0138
ILE 540.0133
ARG 550.0172
SER 560.0353
LEU 570.0363
ASP 580.0273
VAL 590.0292
VAL 600.0194
GLY 610.0178
LYS 620.0175
ILE 630.0150
ARG 640.0166
ARG 650.0191
GLU 660.0085
ILE 670.0090
GLN 680.0096
ASN 690.0080
LEU 700.0080
LYS 710.0107
LEU 720.0122
PHE 730.0093
ARG 740.0123
HIS 750.0123
PRO 760.0072
HIS 770.0067
ILE 780.0090
ILE 790.0087
LYS 800.0123
LEU 810.0174
TYR 820.0162
GLN 830.0134
VAL 840.0118
ILE 850.0083
SER 860.0069
THR 870.0070
PRO 880.0084
SER 890.0096
ASP 900.0094
ILE 910.0113
PHE 920.0102
MET 930.0138
VAL 940.0140
MET 950.0174
GLU 960.0236
TYR 970.0142
VAL 980.0141
SER 990.0222
GLY 1000.0374
GLY 1010.0352
GLU 1020.0282
LEU 1030.0214
PHE 1040.0167
ASP 1050.0176
TYR 1060.0265
ILE 1070.0061
CYS 1080.0136
LYS 1090.0322
ASN 1100.0340
GLY 1110.0059
ARG 1120.0050
LEU 1130.0036
ASP 1140.0038
GLU 1150.0049
LYS 1160.0036
GLU 1170.0042
SER 1180.0026
ARG 1190.0020
ARG 1200.0038
LEU 1210.0046
PHE 1220.0037
GLN 1230.0016
GLN 1240.0044
ILE 1250.0062
LEU 1260.0093
SER 1270.0093
GLY 1280.0112
VAL 1290.0114
ASP 1300.0102
TYR 1310.0117
CYS 1320.0104
HIS 1330.0109
ARG 1340.0117
HIS 1350.0106
MET 1360.0057
VAL 1370.0050
VAL 1380.0050
HIS 1390.0048
ARG 1400.0049
ASP 1410.0101
LEU 1420.0072
LYS 1430.0098
PRO 1440.0127
GLU 1450.0162
ASN 1460.0184
VAL 1470.0177
LEU 1480.0190
LEU 1490.0195
ASP 1500.0217
ALA 1510.0324
HIS 1520.0288
MET 1530.0175
ASN 1540.0168
ALA 1550.0112
LYS 1560.0068
ILE 1570.0071
ALA 1580.0078
ASP 1590.0092
PHE 1600.0091
GLY 1610.0076
LEU 1620.0066
SER 1630.0047
ASN 1640.0045
MET 1650.0035
MET 1660.0024
SER 1670.0016
ASP 1680.0033
GLY 1690.0057
GLU 1700.0055
PHE 1710.0047
LEU 1720.0039
ARG 1730.0043
SER 1750.0037
CYS 1760.0037
GLY 1770.0038
SER 1780.0043
PRO 1790.0040
ASN 1800.0044
TYR 1810.0054
ALA 1820.0047
ALA 1830.0054
PRO 1840.0046
GLU 1850.0072
VAL 1860.0052
ILE 1870.0049
SER 1880.0066
GLY 1890.0054
ARG 1900.0069
LEU 1910.0061
TYR 1920.0055
ALA 1930.0048
GLY 1940.0046
PRO 1950.0081
GLU 1960.0097
VAL 1970.0096
ASP 1980.0098
ILE 1990.0113
TRP 2000.0087
SER 2010.0088
SER 2020.0093
GLY 2030.0085
VAL 2040.0078
ILE 2050.0072
LEU 2060.0055
TYR 2070.0060
ALA 2080.0074
LEU 2090.0064
LEU 2100.0128
CYS 2110.0131
GLY 2120.0160
THR 2130.0140
LEU 2140.0120
PRO 2150.0110
PHE 2160.0075
ASP 2170.0085
ASP 2180.0117
ASP 2190.0155
HIS 2200.0084
VAL 2210.0109
PRO 2220.0107
THR 2230.0058
LEU 2240.0039
PHE 2250.0030
LYS 2260.0066
LYS 2270.0080
ILE 2280.0074
CYS 2290.0084
ASP 2300.0074
GLY 2310.0086
ILE 2320.0034
PHE 2330.0035
TYR 2340.0069
THR 2350.0111
PRO 2360.0205
GLN 2370.0302
TYR 2380.0332
LEU 2390.0237
ASN 2400.0220
PRO 2410.0191
SER 2420.0122
VAL 2430.0084
ILE 2440.0089
SER 2450.0038
LEU 2460.0035
LEU 2470.0045
LYS 2480.0061
HIS 2490.0093
MET 2500.0117
LEU 2510.0103
GLN 2520.0108
VAL 2530.0100
ASP 2540.0113
PRO 2550.0121
MET 2560.0136
LYS 2570.0150
ARG 2580.0143
ALA 2590.0157
THR 2600.0097
ILE 2610.0097
LYS 2620.0079
ASP 2630.0052
ILE 2640.0052
ARG 2650.0077
GLU 2660.0076
HIS 2670.0066
GLU 2680.0108
TRP 2690.0086
PHE 2700.0073
LYS 2710.0117
GLN 2720.0126
ASP 2730.0133
LEU 2740.0128
PRO 2750.0192
LYS 2760.0254
TYR 2770.0247
LEU 2780.0151
PHE 2790.0142
PRO 2800.0090
GLU 2810.0158
ASP 2820.0103
LYS 3950.0169
ALA 3960.0112
LYS 3970.0088
TRP 3980.0046
HIS 3990.0106
LEU 4000.0114
GLY 4010.0106
ILE 4020.0102
ARG 4030.0084
SER 4040.0072
GLN 4050.0109
SER 4060.0131
ARG 4070.0116
PRO 4080.0076
ASN 4090.0093
ASP 4100.0066
ILE 4110.0066
MET 4120.0048
ALA 4130.0029
GLU 4140.0030
VAL 4150.0043
CYS 4160.0048
ARG 4170.0064
ALA 4180.0061
ILE 4190.0051
LYS 4200.0063
GLN 4210.0083
LEU 4220.0086
ASP 4230.0094
TYR 4240.0096
GLU 4250.0085
TRP 4260.0075
LYS 4270.0069
VAL 4280.0078
VAL 4290.0106
ASN 4300.0076
PRO 4310.0075
TYR 4320.0070
TYR 4330.0071
LEU 4340.0075
ARG 4350.0076
VAL 4360.0079
ARG 4370.0073
ARG 4380.0075
LYS 4390.0073
ASN 4400.0118
PRO 4410.0195
VAL 4420.0172
THR 4430.0120
SER 4440.0156
THR 4450.0067
TYR 4460.0051
SER 4470.0031
LYS 4480.0031
MET 4490.0040
SER 4500.0027
LEU 4510.0034
GLN 4520.0022
LEU 4530.0028
TYR 4540.0025
GLN 4550.0051
VAL 4560.0106
ASP 4570.0090
SER 4580.0101
ARG 4590.0052
THR 4600.0045
TYR 4610.0040
LEU 4620.0056
LEU 4630.0062
ASP 4640.0064
PHE 4650.0039
ARG 4660.0028
SER 4670.0027
ILE 4680.0022
ASP 4690.0022
ASP 4700.0040
GLU 4710.0035
LEU 5260.0086
THR 5270.0127
PRO 5280.0127
ARG 5290.0103
PRO 5300.0106
GLY 5310.0046
SER 5320.0051
HIS 5330.0040
THR 5340.0053
ILE 5350.0052
GLU 5360.0033
PHE 5370.0037
PHE 5380.0051
GLU 5390.0043
MET 5400.0038
CYS 5410.0045
ALA 5420.0062
ASN 5430.0070
LEU 5440.0065
ILE 5450.0072
LYS 5460.0100
ILE 5470.0122
LEU 5480.0121
ALA 5490.0132
PRO 740.0262
ALA 750.0175
GLN 760.0209
ALA 770.0235
ARG 780.0173
PRO 790.0087
THR 800.0094
VAL 810.0088
PHE 820.0090
ARG 830.0086
TRP 840.0052
THR 850.0076
GLY 860.0101
GLY 870.0112
GLY 880.0089
LYS 890.0085
GLU 900.0068
VAL 910.0052
TYR 920.0038
LEU 930.0024
SER 940.0065
GLY 950.0071
SER 960.0060
PHE 970.0030
ASN 980.0035
ASN 990.0063
TRP 1000.0068
SER 1010.0053
LYS 1020.0020
LEU 1030.0040
PRO 1040.0049
LEU 1050.0054
THR 1060.0059
ARG 1070.0059
ASP 1080.0067
HIS 1090.0097
ASN 1100.0097
ASN 1110.0092
PHE 1120.0072
VAL 1130.0084
ALA 1140.0130
ILE 1150.0116
LEU 1160.0135
ASP 1170.0137
LEU 1180.0166
PRO 1190.0141
GLU 1200.0136
GLY 1210.0068
GLU 1220.0099
HIS 1230.0152
GLN 1240.0165
TYR 1250.0139
LYS 1260.0088
PHE 1270.0075
PHE 1280.0055
VAL 1290.0062
ASP 1300.0071
GLY 1310.0079
GLN 1320.0045
TRP 1330.0036
THR 1340.0119
HIS 1350.0089
ASP 1360.0300
PRO 1370.0396
SER 1380.0547
GLU 1390.0334
PRO 1400.0210
ILE 1410.0091
VAL 1420.0226
THR 1430.0327
SER 1440.0172
GLN 1450.0121
LEU 1460.0179
GLY 1470.0353
THR 1480.0401
VAL 1490.0121
ASN 1500.0125
ASN 1510.0132
ILE 1520.0186
ILE 1530.0232
GLN 1540.0098
VAL 1550.0112
LYS 1560.0116
LYS 1570.0131
THR 1580.0137
ASP 1590.0100
PHE 1600.0100
GLU 1610.0108
VAL 1620.0103
PHE 1630.0114
ASP 1640.0127
ALA 1650.0145
LEU 1660.0140
MET 1670.0177
VAL 1680.0221
ASP 1690.0186
SER 1700.0202
GLN 1710.0279
HIS 1880.0056
GLN 1890.0084
GLU 1900.0083
PRO 1910.0100
TYR 1920.0036
VAL 1930.0069
CYS 1940.0092
LYS 1950.0086
ARG 2010.0124
ALA 2020.0077
PRO 2030.0028
PRO 2040.0020
ILE 2050.0065
LEU 2060.0088
PRO 2070.0080
PRO 2080.0097
HIS 2090.0085
LEU 2100.0091
LEU 2110.0104
GLN 2120.0092
VAL 2130.0082
ILE 2140.0073
LEU 2150.0066
ASN 2160.0089
LYS 2170.0097
ASP 2180.0140
THR 2190.0164
GLY 2200.0222
ILE 2210.0087
SER 2220.0174
CYS 2230.0246
ASP 2240.0282
PRO 2250.0184
ALA 2260.0098
LEU 2270.0093
LEU 2280.0070
PRO 2290.0074
GLU 2300.0104
PRO 2310.0061
ASN 2320.0057
HIS 2330.0047
VAL 2340.0058
MET 2350.0072
LEU 2360.0055
ASN 2370.0058
HIS 2380.0061
LEU 2390.0065
TYR 2400.0068
ALA 2410.0074
LEU 2420.0036
SER 2430.0096
ILE 2440.0048
LYS 2450.0118
ASP 2460.0103
GLY 2470.0090
VAL 2480.0084
MET 2490.0055
VAL 2500.0041
LEU 2510.0052
SER 2520.0051
ALA 2530.0052
THR 2540.0052
HIS 2550.0054
ARG 2560.0031
TYR 2570.0030
LYS 2580.0059
LYS 2590.0082
LYS 2600.0067
TYR 2610.0053
VAL 2620.0051
THR 2630.0049
THR 2640.0049
LEU 2650.0046
LEU 2660.0038
TYR 2670.0049
LYS 2680.0058
PRO 2690.0069
ILE 2700.0076
ASN 250.0015
SER 260.0014
VAL 270.0033
TYR 280.0029
THR 290.0024
SER 300.0037
PHE 310.0040
MET 320.0032
LYS 330.0040
SER 340.0051
HIS 350.0051
ARG 360.0044
CYS 370.0027
TYR 380.0040
ASP 390.0049
LEU 400.0047
ILE 410.0045
PRO 420.0062
THR 430.0070
SER 440.0070
SER 450.0055
LYS 460.0047
LEU 470.0044
VAL 480.0038
VAL 490.0034
PHE 500.0061
ASP 510.0062
THR 520.0054
SER 530.0052
LEU 540.0041
GLN 550.0054
VAL 560.0041
LYS 570.0033
LYS 580.0053
ALA 590.0061
PHE 600.0060
PHE 610.0081
ALA 620.0087
LEU 630.0081
VAL 640.0092
THR 650.0123
ASN 660.0128
GLY 670.0110
VAL 680.0104
ARG 690.0083
ALA 700.0039
ALA 710.0031
PRO 720.0038
LEU 730.0034
TRP 740.0043
ASP 750.0058
SER 760.0054
LYS 770.0043
LYS 780.0032
GLN 790.0036
SER 800.0043
PHE 810.0031
VAL 820.0023
GLY 830.0021
MET 840.0020
LEU 850.0033
THR 860.0034
ILE 870.0040
THR 880.0038
ASP 890.0042
PHE 900.0059
ILE 910.0059
ASN 920.0056
ILE 930.0054
LEU 940.0056
HIS 950.0057
ARG 960.0045
TYR 970.0020
TYR 980.0020
LYS 990.0028
SER 1000.0144
ALA 1010.0207
LEU 1020.0296
VAL 1030.0204
GLN 1040.0167
ILE 1050.0074
TYR 1060.0086
GLU 1070.0080
LEU 1080.0081
GLU 1090.0095
GLU 1100.0063
HIS 1110.0055
LYS 1120.0062
ILE 1130.0060
GLU 1140.0081
THR 1150.0099
TRP 1160.0044
ARG 1170.0021
GLU 1180.0064
VAL 1190.0085
TYR 1200.0120
LEU 1210.0082
GLN 1220.0138
ASP 1230.0203
SER 1240.0195
PHE 1250.0133
LYS 1260.0104
PRO 1270.0091
LEU 1280.0066
VAL 1290.0071
CYS 1300.0036
ILE 1310.0028
SER 1320.0024
PRO 1330.0026
ASN 1340.0031
ALA 1350.0064
SER 1360.0049
LEU 1370.0036
PHE 1380.0031
ASP 1390.0044
ALA 1400.0065
VAL 1410.0048
SER 1420.0082
SER 1430.0102
LEU 1440.0084
ILE 1450.0107
ARG 1460.0159
ASN 1470.0151
LYS 1480.0096
ILE 1490.0100
HIS 1500.0074
ARG 1510.0065
LEU 1520.0048
PRO 1530.0042
VAL 1540.0032
ILE 1550.0063
ASP 1560.0078
PRO 1570.0070
GLU 1580.0093
SER 1590.0096
GLY 1600.0064
ASN 1610.0058
THR 1620.0043
LEU 1630.0033
TYR 1640.0026
ILE 1650.0039
LEU 1660.0035
THR 1670.0030
HIS 1680.0026
LYS 1690.0021
ARG 1700.0029
ILE 1710.0023
LEU 1720.0008
LYS 1730.0023
PHE 1740.0031
LEU 1750.0020
LYS 1760.0026
LEU 1770.0025
PHE 1780.0012
ILE 1790.0016
THR 1800.0097
GLU 1810.0117
PHE 1820.0067
PRO 1830.0024
LYS 1840.0060
PRO 1850.0076
GLU 1860.0095
PHE 1870.0067
MET 1880.0026
SER 1890.0064
LYS 1900.0065
SER 1910.0035
LEU 1920.0028
GLU 1930.0038
GLU 1940.0091
LEU 1950.0054
GLN 1960.0076
ILE 1970.0089
GLY 1980.0108
THR 1990.0112
TYR 2000.0072
ALA 2010.0184
ASN 2020.0200
ILE 2030.0062
ALA 2040.0035
MET 2050.0079
VAL 2060.0057
ARG 2070.0039
THR 2080.0014
THR 2090.0025
THR 2100.0046
PRO 2110.0046
VAL 2120.0046
TYR 2130.0049
VAL 2140.0048
ALA 2150.0039
LEU 2160.0050
GLY 2170.0071
ILE 2180.0063
PHE 2190.0049
VAL 2200.0081
GLN 2210.0108
HIS 2220.0095
ARG 2230.0056
VAL 2240.0056
SER 2250.0047
ALA 2260.0049
LEU 2270.0051
PRO 2280.0064
VAL 2290.0056
VAL 2300.0062
ASP 2310.0050
GLU 2320.0064
LYS 2330.0055
GLY 2340.0060
ARG 2350.0045
VAL 2360.0049
VAL 2370.0040
ASP 2380.0056
ILE 2390.0074
TYR 2400.0041
SER 2410.0040
LYS 2420.0032
PHE 2430.0036
ASP 2440.0030
VAL 2450.0034
ILE 2460.0043
ASN 2470.0060
LEU 2480.0064
ALA 2490.0067
ALA 2500.0094
GLU 2510.0110
LYS 2520.0087
THR 2530.0105
TYR 2540.0084
ASN 2550.0109
ASN 2560.0080
LEU 2570.0070
ASP 2580.0048
VAL 2590.0057
SER 2600.0018
VAL 2610.0017
THR 2620.0016
LYS 2630.0024
ALA 2640.0026
LEU 2650.0059
GLN 2660.0057
HIS 2670.0060
ARG 2680.0067
SER 2690.0065
HIS 2700.0105
TYR 2710.0062
PHE 2720.0078
GLU 2730.0122
GLY 2740.0162
VAL 2750.0049
LEU 2760.0035
LYS 2770.0045
CYS 2780.0061
TYR 2790.0091
LEU 2800.0052
HIS 2810.0052
GLU 2820.0061
THR 2830.0041
LEU 2840.0034
GLU 2850.0027
THR 2860.0045
ILE 2870.0054
ILE 2880.0047
ASN 2890.0046
ARG 2900.0032
LEU 2910.0027
VAL 2920.0013
GLU 2930.0014
ALA 2940.0014
GLU 2950.0010
VAL 2960.0016
HIS 2970.0034
ARG 2980.0043
LEU 2990.0051
VAL 3000.0059
VAL 3010.0065
VAL 3020.0075
ASP 3030.0094
GLU 3040.0091
ASN 3050.0061
ASP 3060.0045
VAL 3070.0069
VAL 3080.0064
LYS 3090.0055
GLY 3100.0076
ILE 3110.0067
VAL 3120.0069
SER 3130.0056
LEU 3140.0054
SER 3150.0044
ASP 3160.0075
ILE 3170.0069
LEU 3180.0049
GLN 3190.0078
ALA 3200.0054
LEU 3210.0031
VAL 3220.0031
LEU 3230.0045
THR 3240.0041

If you find results from this site helpful for your research, please cite one of our papers:

elNémo is maintained by Yves-Henri Sanejouand.
It was developed by Karsten Suhre.
Between 2003 and 2014, it was hosted by IGS (Marseille).
Between 2015 and 2025, it was hosted by US2B (Nantes).
Last modification: april 24th, 2026.