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Normal Mode Analysis for ID 2607150732291466857

Conformational change expected to be analysed



The following table indicates for every normal mode its frequency (black, normalized relative to the lowest mode frequency) and its collectivity (magenta). If a second structure was submitted, the cummulative overlap between the normal modes and the conformational change is computed (red). The corresponding amplitude (dq) is then also given (green). Click on the mode link to obtain a visualization of the mean square displacement <R2> of the C-alpha atoms associated to each mode.

WARNING: there are 1 low-collectivity modes among your first 5 modes (see below)! The degree of collectivity indicates the fraction of residues that are significantly affected by a given mode. While low-frequency modes are expected to have collective character, computed ones sometimes happen to be localized. In such cases, they correspond to motions of some extended parts of the system, as often observed in crystallographic protein structures for N- and C-termini.

WARNING: Rotation-translation modes have a cumulative overlap of 0.7830 !!! This probably means that the second conformation was not fitted properly onto the first one.

[HELP on collectivity] [HELP on overlap]

<R2> frequency collectivity cumulative overlap amplitude (dq)
mode 7 1.00 0.2077 0.000 66.8609
mode 8 1.46 0.1588 0.031 231.4781
mode 9 1.83 0.0711 0.047 -145.1351
mode 10 2.95 0.2575 0.089 -258.7666
mode 11 3.28 0.2279 0.188 -401.8640
mode 12 3.80 0.5292 0.188 -80.5521
mode 13 4.13 0.4556 0.256 -330.2195
mode 14 4.35 0.3230 0.256 15.2877
mode 15 4.65 0.4013 0.293 -236.6581
mode 16 4.66 0.2813 0.481 560.8530
mode 17 4.86 0.4131 0.487 78.1723
mode 18 5.30 0.4096 0.502 146.1564
mode 19 5.79 0.3648 0.502 39.7795
mode 20 5.82 0.4813 0.508 109.0254
mode 21 5.96 0.4102 0.513 -65.5938
mode 22 6.26 0.3224 0.534 -200.6711
mode 23 6.35 0.5855 0.539 -39.3847
mode 24 6.60 0.5712 0.565 -218.8585
mode 25 6.95 0.5365 0.570 82.4266
mode 26 7.23 0.5364 0.581 120.7291
mode 27 7.41 0.3250 0.602 184.0575
mode 28 7.56 0.5325 0.602 75.9289
mode 29 7.79 0.3311 0.612 132.7743
mode 30 8.00 0.4215 0.638 204.4998
mode 31 8.20 0.5358 0.649 -114.4134
mode 32 8.47 0.4822 0.659 145.3731
mode 33 8.72 0.5046 0.659 25.9434
mode 34 8.78 0.5238 0.659 43.2091
mode 35 8.85 0.3568 0.665 -38.2870
mode 36 9.08 0.2984 0.665 -26.3383
mode 37 9.22 0.3782 0.680 162.1961
mode 38 9.34 0.4062 0.685 106.7174
mode 39 9.44 0.3755 0.712 198.9090
mode 40 9.69 0.4204 0.727 -166.7198
mode 41 9.86 0.3795 0.748 185.8514
mode 42 10.11 0.4177 0.769 -172.7975
mode 43 10.17 0.5120 0.769 -14.7048
mode 44 10.30 0.5016 0.774 -100.1380
mode 45 10.46 0.3561 0.774 -77.0375
mode 46 10.50 0.3089 0.785 132.0155
mode 47 10.77 0.3573 0.790 -44.6444
mode 48 10.81 0.3604 0.790 64.4174
mode 49 10.98 0.4150 0.790 22.7858
mode 50 11.20 0.2248 0.795 -57.8363
mode 51 11.26 0.3822 0.795 -0.6198
mode 52 11.57 0.5087 0.811 -159.6378
mode 53 11.66 0.2119 0.816 92.1754
mode 54 11.85 0.5156 0.832 164.4288
mode 55 12.02 0.4258 0.832 48.6793
mode 56 12.12 0.3839 0.842 -117.0469
mode 57 12.16 0.5342 0.842 -4.1333
mode 58 12.41 0.4072 0.848 118.1009
mode 59 12.50 0.3553 0.848 -46.3022
mode 60 12.58 0.4350 0.853 50.9881
mode 61 12.71 0.4739 0.858 -79.4449
mode 62 12.78 0.3613 0.874 178.2107
mode 63 12.87 0.2394 0.900 -207.8482
mode 64 13.13 0.4040 0.910 110.8681
mode 65 13.19 0.5068 0.910 -8.4981
mode 66 13.26 0.3972 0.916 -121.2882
mode 67 13.43 0.4191 0.916 5.8759
mode 68 13.49 0.4584 0.921 -44.4602
mode 69 13.63 0.2686 0.921 14.9239
mode 70 13.64 0.5048 0.921 -33.8423
mode 71 13.72 0.4857 0.926 -81.7140
mode 72 13.79 0.5116 0.926 6.7898
mode 73 13.87 0.3785 0.926 -21.7915
mode 74 14.00 0.3999 0.926 47.5118
mode 75 14.16 0.4380 0.926 25.3560
mode 76 14.23 0.3185 0.926 22.3939
mode 77 14.36 0.4228 0.926 11.1371
mode 78 14.44 0.3174 0.926 -41.7519
mode 79 14.51 0.4593 0.926 14.6214
mode 80 14.60 0.2026 0.926 -37.1694
mode 81 14.70 0.4076 0.926 4.4763
mode 82 14.81 0.4430 0.931 -40.7400
mode 83 14.83 0.4551 0.931 -11.9325
mode 84 15.03 0.3699 0.931 -22.9524
mode 85 15.06 0.5133 0.931 39.3682
mode 86 15.19 0.5190 0.942 -119.3129
mode 87 15.25 0.4895 0.942 63.6717
mode 88 15.37 0.5745 0.947 83.8387
mode 89 15.41 0.5282 0.952 -75.3453
mode 90 15.55 0.5262 0.952 -34.0268
mode 91 15.64 0.5050 0.952 12.1662
mode 92 15.81 0.5477 0.952 -17.1583
mode 93 15.84 0.4802 0.952 34.1132
mode 94 15.91 0.5055 0.952 1.0279
mode 95 16.12 0.1762 0.952 -47.2854
mode 96 16.16 0.3417 0.963 128.9783
mode 97 16.22 0.4685 0.963 -56.5969
mode 98 16.30 0.4523 0.968 -25.9801
mode 99 16.35 0.4669 0.968 -34.4217
mode 100 16.38 0.5222 0.968 -37.9361
mode 101 16.50 0.5299 0.968 36.6485
mode 102 16.53 0.1406 0.968 -52.8626
mode 103 16.58 0.4298 0.968 2.8943
mode 104 16.71 0.4366 0.968 -21.2473
mode 105 16.74 0.4849 0.968 -10.9105
mode 106 16.83 0.4848 0.968 6.3012

If you find results from this site helpful for your research, please cite one of our papers:

elNémo is maintained by Yves-Henri Sanejouand.
It was developed by Karsten Suhre.
Between 2003 and 2014, it was hosted by IGS (Marseille).
Between 2015 and 2025, it was hosted by US2B (Nantes).
Last modification: april 24th, 2026.