CNRS Nantes University US2B US2B
home |  start a new run |  job status |  references&downloads |  examples |  help  

Should you encounter any unexpected behaviour,
please let us know.
 elNémo has been relocated.
**Some cleaning from time to time**
Sorry for the inconvenience.


***  dar29  ***

Normal Mode Analysis for ID 2607160252271657563

The following table indicates for every normal mode its frequency (black, normalized relative to the lowest mode frequency) and its collectivity (magenta). If a second structure was submitted, the cummulative overlap between the normal modes and the conformational change is computed (red). The corresponding amplitude (dq) is then also given (green). Click on the mode link to obtain a visualization of the mean square displacement <R2> of the C-alpha atoms associated to each mode.

WARNING: there are 5 low-collectivity modes among your first 5 modes (see below)! The degree of collectivity indicates the fraction of residues that are significantly affected by a given mode. While low-frequency modes are expected to have collective character, computed ones sometimes happen to be localized. In such cases, they correspond to motions of some extended parts of the system, as often observed in crystallographic protein structures for N- and C-termini.

[HELP on collectivity] [HELP on overlap]

<R2> frequency collectivity
mode 7 1.00 0.0139
mode 8 1.04 0.0177
mode 9 1.16 0.0229
mode 10 1.21 0.0331
mode 11 1.25 0.0131
mode 12 1.35 0.0142
mode 13 1.41 0.0138
mode 14 1.48 0.0145
mode 15 3.56 0.0292
mode 16 3.64 0.0448
mode 17 3.84 0.0327
mode 18 4.60 0.0263
mode 19 4.86 0.0310
mode 20 5.57 0.0231
mode 21 5.66 0.0235
mode 22 6.00 0.0207
mode 23 9.33 0.0253
mode 24 10.08 0.0284
mode 25 10.72 0.0242
mode 26 11.04 0.0191
mode 27 14.02 0.0226
mode 28 15.25 0.0334
mode 29 15.44 0.0407
mode 30 17.42 0.0204
mode 31 19.66 0.0282
mode 32 20.17 0.0289
mode 33 21.66 0.0244
mode 34 22.45 0.0220
mode 35 23.98 0.0296
mode 36 24.85 0.0322
mode 37 27.04 0.0181
mode 38 28.02 0.0163
mode 39 31.62 0.0130
mode 40 32.17 0.0197
mode 41 35.43 0.0131
mode 42 36.30 0.0098
mode 43 38.77 0.0202
mode 44 40.78 0.0106
mode 45 41.72 0.0195
mode 46 42.90 0.0209
mode 47 43.87 0.0188
mode 48 48.78 0.0087
mode 49 50.32 0.0099
mode 50 51.44 0.0141
mode 51 52.08 0.0274
mode 52 52.48 0.0249
mode 53 52.99 0.0113
mode 54 54.01 0.0129
mode 55 59.83 0.0125
mode 56 60.30 0.0145
mode 57 62.70 0.0201
mode 58 64.21 0.0210
mode 59 65.10 0.0302
mode 60 65.25 0.0307
mode 61 69.75 0.0158
mode 62 77.56 0.0175
mode 63 83.34 0.0219
mode 64 84.00 0.0174
mode 65 86.00 0.0219
mode 66 87.99 0.0201
mode 67 88.62 0.0194
mode 68 89.81 0.0190
mode 69 89.88 0.0205
mode 70 91.05 0.0186
mode 71 92.00 0.0152
mode 72 95.86 0.0173
mode 73 96.23 0.0230
mode 74 98.68 0.0250
mode 75 100.09 0.1033
mode 76 100.44 0.1630
mode 77 103.17 0.0907
mode 78 105.62 0.1997
mode 79 108.77 0.0327
mode 80 112.93 0.0083
mode 81 114.88 0.0146
mode 82 119.23 0.0482
mode 83 124.53 0.0701
mode 84 125.57 0.0437
mode 85 126.78 0.0154
mode 86 128.05 0.0131
mode 87 128.20 0.2170
mode 88 129.62 0.0208
mode 89 132.29 0.0149
mode 90 132.40 0.1293
mode 91 134.06 0.0536
mode 92 134.43 0.0912
mode 93 136.54 0.0201
mode 94 143.20 0.0289
mode 95 145.39 0.0465
mode 96 147.60 0.0083
mode 97 150.79 0.0708
mode 98 151.54 0.0299
mode 99 155.58 0.1122
mode 100 156.14 0.2588
mode 101 157.49 0.2887
mode 102 161.58 0.3730
mode 103 165.57 0.2320
mode 104 166.96 0.0366
mode 105 171.79 0.1530
mode 106 172.27 0.0972

If you find results from this site helpful for your research, please cite one of our papers:

elNémo is maintained by Yves-Henri Sanejouand.
It was developed by Karsten Suhre.
Between 2003 and 2014, it was hosted by IGS (Marseille).
Between 2015 and 2025, it was hosted by US2B (Nantes).
Last modification: april 24th, 2026.