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***  MHC1  ***

<R2> analysis for 2607180828532135053

---  normal mode 100  ---

This page gives a visualization of the normalized mean square displacement <R2> of all C-alpha atoms in the protein that are associated to this mode (black bars). The three components of the corresponding eigenvector are shown on the left (colored bars). Here is the raw data for <R2> and for the eigenvector (shift-click on the links for download).

XYZresidue<R2><R2>max = 0.1409
MET 10.0398
SER 20.0263
THR 30.0102
ILE 40.0280
THR 50.0285
LYS 60.0228
ASP 70.0135
GLN 80.0241
ILE 90.0203
LEU 100.0137
GLU 110.0291
GLY 120.0269
VAL 130.0087
ALA 140.0293
ALA 150.0359
LEU 160.0100
SER 170.0059
VAL 180.0079
MET 190.0105
GLU 200.0090
ILE 210.0122
VAL 220.0106
GLU 230.0132
LEU 240.0174
ILE 250.0181
SER 260.0147
ALA 270.0399
MET 280.0309
GLU 290.0061
GLU 300.0282
LYS 310.0314
PHE 320.0236
GLY 330.0445
VAL 340.0614
SER 350.0552
ALA 360.0257
ALA 370.0239
ALA 380.0327
VAL 390.0585
ALA 400.0612
ALA 410.0288
GLY 420.0614
PRO 430.0829
ALA 440.0556
ALA 450.0485
ALA 460.0811
VAL 470.0850
GLU 480.0625
ALA 490.1139
ALA 500.1409
GLU 510.0115
GLU 520.0157
GLN 530.0156
THR 540.0129
GLU 550.0163
PHE 560.0073
ASP 570.0049
VAL 580.0024
VAL 590.0036
LEU 600.0055
ALA 610.0108
SER 620.0107
PHE 630.0105
GLY 640.0102
GLU 650.0101
ASN 660.0102
LYS 670.0114
VAL 680.0110
ALA 690.0097
VAL 700.0105
ILE 710.0106
LYS 720.0085
ALA 730.0067
VAL 740.0102
ARG 750.0111
GLY 760.0043
ALA 770.0082
THR 780.0130
GLY 790.0124
LEU 800.0164
GLY 810.0242
LEU 820.0218
LYS 830.0265
GLU 840.0254
ALA 850.0177
LYS 860.0150
ASP 870.0160
LEU 880.0151
VAL 890.0114
GLU 900.0110
SER 910.0103
ALA 920.0104
PRO 930.0103
ALA 940.0092
VAL 950.0083
LEU 960.0036
LYS 970.0017
GLU 980.0058
GLY 990.0095
VAL 1000.0073
ASN 1010.0088
LYS 1020.0091
ASP 1030.0075
GLU 1040.0048
ALA 1050.0050
GLU 1060.0074
THR 1070.0053
LEU 1080.0051
LYS 1090.0080
LYS 1100.0091
SER 1110.0081
LEU 1120.0087
GLU 1130.0097
GLU 1140.0096
ALA 1150.0097
GLY 1160.0104
ALA 1170.0093
SER 1180.0096
VAL 1190.0082
GLU 1200.0084
ILE 1210.0056
LYS 1220.0058
GLU 1230.0100
ALA 1240.0107
ALA 1250.0125
ALA 1260.0153
LYS 1270.0135
ALA 1280.0101
TYR 1290.0088
LYS 1300.0052
ILE 1310.0024
ILE 1320.0028
SER 1330.0038
LEU 1340.0073
LYS 1350.0092
TYR 1360.0097
THR 1370.0064
ARG 1380.0046
LYS 1390.0013
VAL 1400.0028
CYS 1410.0079
ILE 1420.0096
GLY 1430.0124
PRO 1440.0134
GLY 1450.0166
PRO 1460.0107
GLY 1470.0185
LYS 1480.0142
ALA 1490.0097
TYR 1500.0056
LYS 1510.0039
ILE 1520.0032
ILE 1530.0033
SER 1540.0027
LEU 1550.0031
LYS 1560.0023
TYR 1570.0033
THR 1580.0030
ARG 1590.0041
LYS 1600.0038
VAL 1610.0035
CYS 1620.0055
GLY 1630.0075
PRO 1640.0074
GLY 1650.0065
PRO 1660.0061
GLY 1670.0106
GLY 1680.0152
LYS 1690.0121
ALA 1700.0069
TYR 1710.0073
LYS 1720.0055
ILE 1730.0046
ILE 1740.0041
SER 1750.0052
LEU 1760.0051
LYS 1770.0045
TYR 1780.0050
THR 1790.0048
ARG 1800.0054
LYS 1810.0059
VAL 1820.0037
GLY 1830.0059
PRO 1840.0068
GLY 1850.0071
PRO 1860.0072
GLY 1870.0052
ILE 1880.0036
ILE 1890.0024
SER 1900.0007
LEU 1910.0032
LYS 1920.0032
TYR 1930.0041
THR 1940.0041
ARG 1950.0051
LYS 1960.0039
VAL 1970.0051
CYS 1980.0058
ILE 1990.0078
GLN 2000.0111
LEU 2010.0077
GLY 2020.0077
GLY 2030.0061
PRO 2040.0032
GLY 2050.0022
PRO 2060.0019
GLY 2070.0024
ASN 2080.0024
ILE 2090.0023
LYS 2100.0027
THR 2110.0034
ALA 2120.0035
PHE 2130.0027
HIS 2140.0026
CYS 2150.0031
TYR 2160.0029
ALA 2170.0015
ALA 2180.0024
TYR 2190.0023
MET 2200.0015
THR 2210.0025
SER 2220.0026
ILE 2230.0026
LYS 2240.0030
ALA 2250.0034
CYS 2260.0030
ASP 2270.0021
LEU 2280.0015
LYS 2290.0010
LYS 2300.0011
PRO 2310.0012
LEU 2320.0009
MET 2330.0006
GLU 2340.0003
SER 2350.0005
GLY 2360.0006
TRP 2370.0005
SER 2380.0007
ASP 2390.0007
THR 2400.0011
ALA 2410.0007
HIS 2420.0004
GLY 2430.0008
LYS 2440.0008
LYS 2450.0012
SER 2460.0004
LEU 2470.0004
PRO 2480.0004
SER 2490.0006
SER 2500.0007
SER 2510.0005
SER 2520.0006
TYR 2530.0005
SER 2540.0006
TYR 2550.0005
ARG 2560.0003
ARG 2570.0003
LYS 2580.0003
LEU 2590.0005
THR 2600.0006
ASN 2610.0004
PRO 2620.0007
ALA 2630.0008
ASN 2640.0009
LYS 2650.0007
GLU 2660.0004
GLU 2670.0006
SER 2680.0006
ILE 2690.0007
LYS 2700.0010
LYS 2710.0004
GLN 2720.0001
LYS 2730.0005
TYR 2740.0007
SER 2750.0011
TYR 2760.0007
PRO 2770.0008
TRP 2780.0006
GLN 2790.0004
THR 2800.0003
SER 2810.0006
LYS 2820.0006
CYS 2830.0003
PHE 2840.0006
ASP 2880.0009
TYR 2890.0006
GLN 2900.0006
TYR 2910.0016
CYS 2970.0020
ASN 2980.0013
PRO 2990.0012
GLY 3000.0006
LYS 3010.0009
LYS 3020.0013
ASN 3030.0007
THR 3040.0012
ILE 3050.0007
SER 3060.0017
GLY 3070.0023
TYR 3080.0018
LYS 3090.0011
ARG 3100.0017
MET 3110.0017
MET 3120.0011
ALA 3130.0018
THR 3140.0016
LYS 3150.0011
ASP 3160.0015
SER 3170.0008
PHE 3180.0006
GLN 3190.0011
SER 3200.0010
PHE 3210.0013
ASN 3220.0012
LEU 3230.0026
THR 3240.0057
GLU 3250.0074
PRO 3260.0051
HIS 3270.0086
ILE 3280.0056
THR 3290.0045
THR 3300.0058
ASN 3310.0062
LYS 3320.0057
LEU 3330.0033
GLU 3340.0064
TRP 3350.0058
ILE 3360.0086
ASP 3370.0058
PRO 3380.0060
ASP 3390.0059
GLY 3400.0066
ASN 3410.0060
THR 3420.0075
ARG 3430.0051
GLY 3440.0064
GLY 3450.0073
GLY 3460.0068
GLY 10.0069
SER 20.0069
HIS 30.0056
SER 40.0051
MET 50.0038
ARG 60.0030
TYR 70.0023
PHE 80.0022
PHE 90.0016
THR 100.0017
SER 110.0026
VAL 120.0028
SER 130.0045
ARG 140.0061
PRO 150.0075
GLY 160.0096
ARG 170.0090
GLY 180.0084
GLU 190.0073
PRO 200.0056
ARG 210.0037
PHE 220.0033
ILE 230.0027
ALA 240.0024
VAL 250.0018
GLY 260.0017
TYR 270.0017
VAL 280.0018
ASP 290.0016
ASP 300.0018
THR 310.0014
GLN 320.0016
PHE 330.0017
VAL 340.0019
ARG 350.0021
PHE 360.0032
ASP 370.0036
SER 380.0041
ASP 390.0044
ALA 400.0044
ALA 410.0050
SER 420.0046
GLN 430.0044
ARG 440.0039
MET 450.0032
GLU 460.0025
PRO 470.0022
ARG 480.0021
ALA 490.0019
PRO 500.0020
TRP 510.0021
ILE 520.0021
GLU 530.0017
GLN 540.0020
GLU 550.0023
GLY 560.0025
PRO 570.0027
GLU 580.0027
TYR 590.0027
TRP 600.0029
ASP 610.0036
GLY 620.0033
GLU 630.0032
THR 640.0038
ARG 650.0041
LYS 660.0036
VAL 670.0036
LYS 680.0039
ALA 690.0040
HIS 700.0038
SER 710.0042
GLN 720.0055
THR 730.0051
HIS 740.0038
ARG 750.0048
VAL 760.0059
ASP 770.0047
LEU 780.0044
GLY 790.0053
THR 800.0050
LEU 810.0033
ARG 820.0040
GLY 830.0040
TYR 840.0023
TYR 850.0012
ASN 860.0046
GLN 870.0062
SER 880.0094
GLU 890.0109
ALA 900.0119
GLY 910.0059
SER 920.0047
HIS 930.0032
THR 940.0018
VAL 950.0021
GLN 960.0017
ARG 970.0014
MET 980.0022
TYR 990.0027
GLY 1000.0037
CYS 1010.0066
ASP 1020.0079
VAL 1030.0091
GLY 1040.0106
SER 1050.0110
ASP 1060.0124
TRP 1070.0099
ARG 1080.0114
PHE 1090.0108
LEU 1100.0114
ARG 1110.0084
GLY 1120.0067
TYR 1130.0048
HIS 1140.0030
GLN 1150.0021
TYR 1160.0019
ALA 1170.0015
TYR 1180.0015
ASP 1190.0017
GLY 1200.0018
LYS 1210.0026
ASP 1220.0021
TYR 1230.0018
ILE 1240.0019
ALA 1250.0016
LEU 1260.0032
LYS 1270.0047
GLU 1280.0071
ASP 1290.0075
LEU 1300.0064
ARG 1310.0058
SER 1320.0032
TRP 1330.0016
THR 1340.0027
ALA 1350.0040
ALA 1360.0036
ASP 1370.0040
MET 1380.0050
ALA 1390.0039
ALA 1400.0034
GLN 1410.0064
THR 1420.0076
THR 1430.0061
LYS 1440.0057
HIS 1450.0082
LYS 1460.0089
TRP 1470.0071
GLU 1480.0070
ALA 1490.0098
ALA 1500.0103
HIS 1510.0081
VAL 1520.0079
ALA 1530.0060
GLU 1540.0081
GLN 1550.0104
LEU 1560.0068
ARG 1570.0085
ALA 1580.0101
TYR 1590.0087
LEU 1600.0081
GLU 1610.0102
GLY 1620.0103
THR 1630.0087
CYS 1640.0072
VAL 1650.0088
GLU 1660.0075
TRP 1670.0059
LEU 1680.0058
ARG 1690.0066
ARG 1700.0055
TYR 1710.0034
LEU 1720.0040
GLU 1730.0037
ASN 1740.0026
GLY 1750.0025
LYS 1760.0026
GLU 1770.0025
THR 1780.0020
LEU 1790.0019
GLN 1800.0023
ARG 1810.0017
THR 1820.0028
ASP 1830.0032
ALA 1840.0044
PRO 1850.0050
LYS 1860.0060
THR 1870.0056
HIS 1880.0060
MET 1890.0062
THR 1900.0072
HIS 1910.0072
HIS 1920.0072
ALA 1930.0066
VAL 1940.0045
SER 1950.0054
ASP 1960.0084
HIS 1970.0079
GLU 1980.0054
ALA 1990.0057
THR 2000.0050
LEU 2010.0045
ARG 2020.0050
CYS 2030.0047
TRP 2040.0058
ALA 2050.0060
LEU 2060.0043
SER 2070.0038
PHE 2080.0038
TYR 2090.0036
PRO 2100.0037
ALA 2110.0044
GLU 2120.0047
ILE 2130.0049
THR 2140.0051
LEU 2150.0050
THR 2160.0034
TRP 2170.0024
GLN 2180.0021
ARG 2190.0040
ASP 2200.0053
GLY 2210.0025
GLU 2220.0020
ASP 2230.0009
GLN 2240.0012
THR 2250.0002
GLN 2260.0004
ASP 2270.0011
THR 2280.0020
GLU 2290.0028
LEU 2300.0037
VAL 2310.0047
GLU 2320.0048
THR 2330.0048
ARG 2340.0048
PRO 2350.0049
ALA 2360.0045
GLY 2370.0040
ASP 2380.0034
GLY 2390.0035
THR 2400.0039
PHE 2410.0047
GLN 2420.0048
LYS 2430.0049
TRP 2440.0050
ALA 2450.0050
ALA 2460.0040
VAL 2470.0022
VAL 2480.0024
VAL 2490.0042
PRO 2500.0059
SER 2510.0097
GLY 2520.0119
GLN 2530.0098
GLU 2540.0089
GLN 2550.0106
ARG 2560.0075
TYR 2570.0054
THR 2580.0049
CYS 2590.0050
HIS 2600.0049
VAL 2610.0055
GLN 2620.0059
HIS 2630.0052
GLU 2640.0054
GLY 2650.0052
LEU 2660.0101
PRO 2670.0140
LYS 2680.0131
PRO 2690.0097
LEU 2700.0078
THR 2710.0053
LEU 2720.0075
ARG 2730.0082
TRP 2740.0092
GLU 2750.0123
PRO 2760.0180
GLN 2780.0021
ARG 2790.0024
THR 2800.0025
PRO 2810.0030
LYS 2820.0029
ILE 2830.0050
GLN 2840.0049
VAL 2850.0045
TYR 2860.0047
SER 2870.0046
ARG 2880.0050
HIS 2890.0065
PRO 2900.0086
ALA 2910.0083
GLU 2920.0096
ASN 2930.0103
GLY 2940.0102
LYS 2950.0093
SER 2960.0071
ASN 2970.0055
PHE 2980.0035
LEU 2990.0033
ASN 3000.0033
CYS 3010.0036
TYR 3020.0039
VAL 3030.0029
SER 3040.0026
GLY 3050.0023
PHE 3060.0023
HIS 3070.0024
PRO 3080.0019
SER 3090.0026
ASP 3100.0029
ILE 3110.0031
GLU 3120.0038
VAL 3130.0048
ASP 3140.0038
LEU 3150.0033
LEU 3160.0034
LYS 3170.0038
ASN 3180.0046
GLY 3190.0041
GLU 3200.0033
ARG 3210.0035
ILE 3220.0034
GLU 3230.0049
LYS 3240.0045
VAL 3250.0031
GLU 3260.0025
HIS 3270.0017
SER 3280.0007
ASP 3290.0007
LEU 3300.0010
SER 3310.0015
PHE 3320.0020
SER 3330.0023
LYS 3340.0025
ASP 3350.0026
TRP 3360.0023
SER 3370.0023
PHE 3380.0021
TYR 3390.0020
LEU 3400.0021
LEU 3410.0023
TYR 3420.0026
TYR 3430.0024
THR 3440.0028
GLU 3450.0041
PHE 3460.0048
THR 3470.0063
PRO 3480.0063
THR 3490.0105
GLU 3500.0141
LYS 3510.0134
ASP 3520.0086
GLU 3530.0058
TYR 3540.0050
ALA 3550.0051
CYS 3560.0050
ARG 3570.0054
VAL 3580.0052
ASN 3590.0055
HIS 3600.0050
VAL 3610.0050
THR 3620.0042
LEU 3630.0064
SER 3640.0072
GLN 3650.0072
PRO 3660.0067
LYS 3670.0058
ILE 3680.0063
VAL 3690.0065
LYS 3700.0063
TRP 3710.0062
ASP 3720.0071
ARG 3730.0071
ASP 3740.0083
MET 3750.0088
SER 10.0029
GLN 20.0029
PHE 30.0028
ARG 40.0028
VAL 50.0026
SER 60.0027
PRO 70.0027
LEU 80.0026
ASP 90.0025
ARG 100.0025
THR 110.0029
TRP 120.0029
ASN 130.0030
LEU 140.0031
GLY 150.0031
GLU 160.0024
THR 170.0024
VAL 180.0024
GLU 190.0025
LEU 200.0025
LYS 210.0028
CYS 220.0029
GLN 230.0031
VAL 240.0031
LEU 250.0033
LEU 260.0034
SER 270.0035
ASN 280.0029
PRO 290.0028
THR 300.0023
SER 310.0010
GLY 320.0013
CYS 330.0014
SER 340.0010
TRP 350.0012
LEU 360.0007
PHE 370.0009
GLN 380.0011
PRO 390.0014
ARG 400.0017
GLY 410.0010
ALA 420.0014
ALA 430.0015
ALA 440.0011
SER 450.0013
PRO 460.0008
THR 470.0007
PHE 480.0006
LEU 490.0006
LEU 500.0007
TYR 510.0009
LEU 520.0018
SER 530.0025
GLN 540.0035
ASN 550.0034
LYS 560.0031
PRO 570.0021
LYS 580.0018
ALA 590.0013
ALA 600.0017
GLU 610.0030
GLY 620.0028
LEU 630.0018
ASP 640.0013
THR 650.0013
GLN 660.0013
ARG 670.0016
PHE 680.0014
SER 690.0016
GLY 700.0018
LYS 710.0026
ARG 720.0030
LEU 730.0035
GLY 740.0037
ASP 750.0035
THR 760.0032
PHE 770.0027
VAL 780.0025
LEU 790.0020
THR 800.0019
LEU 810.0020
SER 820.0021
ASP 830.0024
PHE 840.0025
ARG 850.0028
ARG 860.0024
GLU 870.0025
ASN 880.0024
GLU 890.0022
GLY 900.0022
TYR 910.0018
TYR 920.0016
PHE 930.0015
CYS 940.0014
SER 950.0011
ALA 960.0014
LEU 970.0011
SER 980.0015
ASN 990.0012
SER 1000.0004
ILE 1010.0005
MET 1020.0004
TYR 1030.0011
PHE 1040.0013
SER 1050.0019
HIS 1060.0022
PHE 1070.0020
VAL 1080.0021
PRO 1090.0022
VAL 1100.0021
PHE 1110.0029
LEU 1120.0028
PRO 1130.0030
ALA 1140.0031
SER 10.0029
GLN 20.0025
PHE 30.0020
ARG 40.0019
VAL 50.0018
SER 60.0019
PRO 70.0029
LEU 80.0035
ASP 90.0048
ARG 100.0052
THR 110.0055
TRP 120.0052
ASN 130.0061
LEU 140.0058
GLY 150.0048
GLU 160.0045
THR 170.0033
VAL 180.0029
GLU 190.0022
LEU 200.0016
LYS 210.0015
CYS 220.0015
GLN 230.0015
VAL 240.0017
LEU 250.0023
LEU 260.0028
SER 270.0032
ASN 280.0029
PRO 290.0026
THR 300.0024
SER 310.0017
GLY 320.0014
CYS 330.0013
SER 340.0013
TRP 350.0013
LEU 360.0013
PHE 370.0014
GLN 380.0018
PRO 390.0021
ARG 400.0025
GLY 410.0004
ALA 420.0013
ALA 430.0018
ALA 440.0010
SER 450.0011
PRO 460.0008
THR 470.0009
PHE 480.0010
LEU 490.0012
LEU 500.0013
TYR 510.0013
LEU 520.0017
SER 530.0018
GLN 540.0021
ASN 550.0014
LYS 560.0011
PRO 570.0012
LYS 580.0011
ALA 590.0012
ALA 600.0012
GLU 610.0016
GLY 620.0019
LEU 630.0016
ASP 640.0020
THR 650.0020
GLN 660.0019
ARG 670.0014
PHE 680.0014
SER 690.0016
GLY 700.0017
LYS 710.0011
ARG 720.0010
LEU 730.0011
GLY 740.0012
ASP 750.0017
THR 760.0012
PHE 770.0011
VAL 780.0012
LEU 790.0012
THR 800.0016
LEU 810.0016
SER 820.0021
ASP 830.0031
PHE 840.0037
ARG 850.0047
ARG 860.0063
GLU 870.0059
ASN 880.0038
GLU 890.0041
GLY 900.0032
TYR 910.0021
TYR 920.0017
PHE 930.0016
CYS 940.0014
SER 950.0017
ALA 960.0017
LEU 970.0016
SER 980.0021
ASN 990.0022
SER 1000.0016
ILE 1010.0018
MET 1020.0015
TYR 1030.0016
PHE 1040.0016
SER 1050.0019
HIS 1060.0018
PHE 1070.0021
VAL 1080.0018
PRO 1090.0026
VAL 1100.0028
PHE 1110.0045
LEU 1120.0061
PRO 1130.0075
ALA 1140.0088

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elNémo is maintained by Yves-Henri Sanejouand.
It was developed by Karsten Suhre.
Between 2003 and 2014, it was hosted by IGS (Marseille).
Between 2015 and 2025, it was hosted by US2B (Nantes).
Last modification: april 24th, 2026.