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***  MHC1  ***

<R2> analysis for 2607180828532135053

---  normal mode 101  ---

This page gives a visualization of the normalized mean square displacement <R2> of all C-alpha atoms in the protein that are associated to this mode (black bars). The three components of the corresponding eigenvector are shown on the left (colored bars). Here is the raw data for <R2> and for the eigenvector (shift-click on the links for download).

XYZresidue<R2><R2>max = 0.0681
MET 10.0095
SER 20.0067
THR 30.0021
ILE 40.0066
THR 50.0070
LYS 60.0058
ASP 70.0033
GLN 80.0054
ILE 90.0046
LEU 100.0036
GLU 110.0073
GLY 120.0065
VAL 130.0023
ALA 140.0066
ALA 150.0082
LEU 160.0020
SER 170.0024
VAL 180.0044
MET 190.0061
GLU 200.0039
ILE 210.0027
VAL 220.0037
GLU 230.0034
LEU 240.0024
ILE 250.0032
SER 260.0033
ALA 270.0073
MET 280.0063
GLU 290.0012
GLU 300.0044
LYS 310.0069
PHE 320.0072
GLY 330.0065
VAL 340.0102
SER 350.0088
ALA 360.0044
ALA 370.0113
ALA 380.0081
VAL 390.0090
ALA 400.0139
ALA 410.0098
GLY 420.0200
PRO 430.0256
ALA 440.0153
ALA 450.0118
ALA 460.0205
VAL 470.0177
GLU 480.0169
ALA 490.0199
ALA 500.0197
GLU 510.0141
GLU 520.0147
GLN 530.0113
THR 540.0130
GLU 550.0099
PHE 560.0052
ASP 570.0031
VAL 580.0024
VAL 590.0023
LEU 600.0030
ALA 610.0026
SER 620.0011
PHE 630.0017
GLY 640.0015
GLU 650.0034
ASN 660.0022
LYS 670.0036
VAL 680.0038
ALA 690.0025
VAL 700.0031
ILE 710.0047
LYS 720.0046
ALA 730.0050
VAL 740.0064
ARG 750.0083
GLY 760.0085
ALA 770.0099
THR 780.0116
GLY 790.0128
LEU 800.0127
GLY 810.0149
LEU 820.0117
LYS 830.0147
GLU 840.0144
ALA 850.0097
LYS 860.0089
ASP 870.0091
LEU 880.0066
VAL 890.0044
GLU 900.0061
SER 910.0016
ALA 920.0006
PRO 930.0009
ALA 940.0015
VAL 950.0030
LEU 960.0034
LYS 970.0033
GLU 980.0039
GLY 990.0056
VAL 1000.0053
ASN 1010.0093
LYS 1020.0092
ASP 1030.0093
GLU 1040.0069
ALA 1050.0049
GLU 1060.0050
THR 1070.0038
LEU 1080.0029
LYS 1090.0037
LYS 1100.0037
SER 1110.0040
LEU 1120.0035
GLU 1130.0034
GLU 1140.0037
ALA 1150.0036
GLY 1160.0010
ALA 1170.0024
SER 1180.0040
VAL 1190.0036
GLU 1200.0053
ILE 1210.0048
LYS 1220.0042
GLU 1230.0045
ALA 1240.0032
ALA 1250.0023
ALA 1260.0067
LYS 1270.0055
ALA 1280.0039
TYR 1290.0031
LYS 1300.0018
ILE 1310.0068
ILE 1320.0128
SER 1330.0157
LEU 1340.0209
LYS 1350.0247
TYR 1360.0260
THR 1370.0180
ARG 1380.0139
LYS 1390.0061
VAL 1400.0073
CYS 1410.0212
ILE 1420.0260
GLY 1430.0357
PRO 1440.0403
GLY 1450.0515
PRO 1460.0121
GLY 1470.0407
LYS 1480.0400
ALA 1490.0321
TYR 1500.0160
LYS 1510.0072
ILE 1520.0060
ILE 1530.0086
SER 1540.0080
LEU 1550.0102
LYS 1560.0046
TYR 1570.0046
THR 1580.0039
ARG 1590.0075
LYS 1600.0084
VAL 1610.0093
CYS 1620.0125
GLY 1630.0221
PRO 1640.0271
GLY 1650.0281
PRO 1660.0404
GLY 1670.0253
GLY 1680.0481
LYS 1690.0350
ALA 1700.0236
TYR 1710.0231
LYS 1720.0157
ILE 1730.0126
ILE 1740.0068
SER 1750.0108
LEU 1760.0173
LYS 1770.0170
TYR 1780.0174
THR 1790.0167
ARG 1800.0169
LYS 1810.0129
VAL 1820.0049
GLY 1830.0154
PRO 1840.0200
GLY 1850.0177
PRO 1860.0197
GLY 1870.0141
ILE 1880.0097
ILE 1890.0048
SER 1900.0022
LEU 1910.0080
LYS 1920.0086
TYR 1930.0113
THR 1940.0122
ARG 1950.0152
LYS 1960.0119
VAL 1970.0105
CYS 1980.0058
ILE 1990.0069
GLN 2000.0055
LEU 2010.0046
GLY 2020.0045
GLY 2030.0038
PRO 2040.0040
GLY 2050.0056
PRO 2060.0065
GLY 2070.0090
ASN 2080.0110
ILE 2090.0098
LYS 2100.0091
THR 2110.0101
ALA 2120.0108
PHE 2130.0087
HIS 2140.0070
CYS 2150.0082
TYR 2160.0063
ALA 2170.0052
ALA 2180.0039
TYR 2190.0040
MET 2200.0041
THR 2210.0053
SER 2220.0067
ILE 2230.0080
LYS 2240.0092
ALA 2250.0107
CYS 2260.0213
ASP 2270.0171
LEU 2280.0107
LYS 2290.0112
LYS 2300.0068
PRO 2310.0025
LEU 2320.0028
MET 2330.0034
GLU 2340.0037
SER 2350.0046
GLY 2360.0022
TRP 2370.0017
SER 2380.0020
ASP 2390.0020
THR 2400.0028
ALA 2410.0031
HIS 2420.0020
GLY 2430.0022
LYS 2440.0014
LYS 2450.0024
SER 2460.0016
LEU 2470.0019
PRO 2480.0006
SER 2490.0024
SER 2500.0022
SER 2510.0016
SER 2520.0014
TYR 2530.0014
SER 2540.0014
TYR 2550.0013
ARG 2560.0012
ARG 2570.0012
LYS 2580.0011
LEU 2590.0014
THR 2600.0014
ASN 2610.0018
PRO 2620.0030
ALA 2630.0029
ASN 2640.0032
LYS 2650.0024
GLU 2660.0018
GLU 2670.0024
SER 2680.0021
ILE 2690.0023
LYS 2700.0028
LYS 2710.0014
GLN 2720.0006
LYS 2730.0010
TYR 2740.0009
SER 2750.0017
TYR 2760.0016
PRO 2770.0017
TRP 2780.0014
GLN 2790.0005
THR 2800.0006
SER 2810.0010
LYS 2820.0010
CYS 2830.0004
PHE 2840.0012
ASP 2880.0078
TYR 2890.0050
GLN 2900.0053
TYR 2910.0134
CYS 2970.0022
ASN 2980.0013
PRO 2990.0032
GLY 3000.0029
LYS 3010.0019
LYS 3020.0030
ASN 3030.0015
THR 3040.0015
ILE 3050.0020
SER 3060.0020
GLY 3070.0030
TYR 3080.0021
LYS 3090.0017
ARG 3100.0022
MET 3110.0012
MET 3120.0013
ALA 3130.0031
THR 3140.0027
LYS 3150.0021
ASP 3160.0034
SER 3170.0010
PHE 3180.0010
GLN 3190.0025
SER 3200.0039
PHE 3210.0052
ASN 3220.0048
LEU 3230.0077
THR 3240.0138
GLU 3250.0166
PRO 3260.0116
HIS 3270.0165
ILE 3280.0097
THR 3290.0064
THR 3300.0123
ASN 3310.0148
LYS 3320.0117
LEU 3330.0067
GLU 3340.0129
TRP 3350.0128
ILE 3360.0192
ASP 3370.0142
PRO 3380.0157
ASP 3390.0162
GLY 3400.0174
ASN 3410.0161
THR 3420.0197
ARG 3430.0155
GLY 3440.0189
GLY 3450.0202
GLY 3460.0204
GLY 10.0112
SER 20.0109
HIS 30.0080
SER 40.0071
MET 50.0049
ARG 60.0039
TYR 70.0039
PHE 80.0039
PHE 90.0041
THR 100.0040
SER 110.0071
VAL 120.0124
SER 130.0185
ARG 140.0287
PRO 150.0330
GLY 160.0681
ARG 170.0616
GLY 180.0520
GLU 190.0384
PRO 200.0234
ARG 210.0170
PHE 220.0132
ILE 230.0096
ALA 240.0059
VAL 250.0028
GLY 260.0014
TYR 270.0014
VAL 280.0012
ASP 290.0013
ASP 300.0020
THR 310.0030
GLN 320.0019
PHE 330.0018
VAL 340.0021
ARG 350.0033
PHE 360.0080
ASP 370.0125
SER 380.0171
ASP 390.0201
ALA 400.0171
ALA 410.0157
SER 420.0109
GLN 430.0132
ARG 440.0092
MET 450.0066
GLU 460.0036
PRO 470.0022
ARG 480.0030
ALA 490.0054
PRO 500.0075
TRP 510.0078
ILE 520.0072
GLU 530.0103
GLN 540.0133
GLU 550.0131
GLY 560.0173
PRO 570.0156
GLU 580.0184
TYR 590.0151
TRP 600.0112
ASP 610.0116
GLY 620.0144
GLU 630.0107
THR 640.0104
ARG 650.0153
LYS 660.0128
VAL 670.0109
LYS 680.0137
ALA 690.0161
HIS 700.0143
SER 710.0161
GLN 720.0221
THR 730.0193
HIS 740.0131
ARG 750.0193
VAL 760.0159
ASP 770.0111
LEU 780.0088
GLY 790.0102
THR 800.0093
LEU 810.0042
ARG 820.0018
GLY 830.0050
TYR 840.0074
TYR 850.0065
ASN 860.0024
GLN 870.0011
SER 880.0015
GLU 890.0038
ALA 900.0040
GLY 910.0098
SER 920.0099
HIS 930.0060
THR 940.0052
VAL 950.0026
GLN 960.0012
ARG 970.0015
MET 980.0032
TYR 990.0040
GLY 1000.0058
CYS 1010.0118
ASP 1020.0135
VAL 1030.0157
GLY 1040.0183
SER 1050.0188
ASP 1060.0222
TRP 1070.0172
ARG 1080.0211
PHE 1090.0205
LEU 1100.0212
ARG 1110.0145
GLY 1120.0118
TYR 1130.0081
HIS 1140.0057
GLN 1150.0021
TYR 1160.0026
ALA 1170.0021
TYR 1180.0025
ASP 1190.0044
GLY 1200.0054
LYS 1210.0062
ASP 1220.0050
TYR 1230.0057
ILE 1240.0056
ALA 1250.0034
LEU 1260.0054
LYS 1270.0051
GLU 1280.0105
ASP 1290.0128
LEU 1300.0127
ARG 1310.0130
SER 1320.0082
TRP 1330.0068
THR 1340.0063
ALA 1350.0125
ALA 1360.0125
ASP 1370.0138
MET 1380.0166
ALA 1390.0139
ALA 1400.0119
GLN 1410.0206
THR 1420.0238
THR 1430.0192
LYS 1440.0183
HIS 1450.0254
LYS 1460.0275
TRP 1470.0225
GLU 1480.0229
ALA 1490.0305
ALA 1500.0308
HIS 1510.0243
VAL 1520.0234
ALA 1530.0168
GLU 1540.0216
GLN 1550.0281
LEU 1560.0171
ARG 1570.0195
ALA 1580.0236
TYR 1590.0202
LEU 1600.0177
GLU 1610.0215
GLY 1620.0219
THR 1630.0189
CYS 1640.0150
VAL 1650.0172
GLU 1660.0142
TRP 1670.0105
LEU 1680.0089
ARG 1690.0095
ARG 1700.0065
TYR 1710.0030
LEU 1720.0034
GLU 1730.0020
ASN 1740.0017
GLY 1750.0025
LYS 1760.0043
GLU 1770.0053
THR 1780.0039
LEU 1790.0026
GLN 1800.0045
ARG 1810.0046
THR 1820.0071
ASP 1830.0078
ALA 1840.0104
PRO 1850.0120
LYS 1860.0133
THR 1870.0129
HIS 1880.0136
MET 1890.0139
THR 1900.0153
HIS 1910.0142
HIS 1920.0135
ALA 1930.0105
VAL 1940.0071
SER 1950.0056
ASP 1960.0093
HIS 1970.0091
GLU 1980.0055
ALA 1990.0083
THR 2000.0096
LEU 2010.0099
ARG 2020.0112
CYS 2030.0110
TRP 2040.0132
ALA 2050.0137
LEU 2060.0118
SER 2070.0098
PHE 2080.0098
TYR 2090.0086
PRO 2100.0091
ALA 2110.0111
GLU 2120.0118
ILE 2130.0121
THR 2140.0127
LEU 2150.0125
THR 2160.0090
TRP 2170.0066
GLN 2180.0046
ARG 2190.0062
ASP 2200.0090
GLY 2210.0050
GLU 2220.0032
ASP 2230.0021
GLN 2240.0020
THR 2250.0019
GLN 2260.0023
ASP 2270.0027
THR 2280.0050
GLU 2290.0069
LEU 2300.0088
VAL 2310.0105
GLU 2320.0105
THR 2330.0105
ARG 2340.0103
PRO 2350.0103
ALA 2360.0100
GLY 2370.0078
ASP 2380.0073
GLY 2390.0078
THR 2400.0100
PHE 2410.0111
GLN 2420.0113
LYS 2430.0113
TRP 2440.0114
ALA 2450.0115
ALA 2460.0094
VAL 2470.0052
VAL 2480.0036
VAL 2490.0053
PRO 2500.0076
SER 2510.0138
GLY 2520.0185
GLN 2530.0152
GLU 2540.0146
GLN 2550.0186
ARG 2560.0126
TYR 2570.0095
THR 2580.0105
CYS 2590.0117
HIS 2600.0123
VAL 2610.0137
GLN 2620.0143
HIS 2630.0130
GLU 2640.0130
GLY 2650.0122
LEU 2660.0211
PRO 2670.0286
LYS 2680.0274
PRO 2690.0217
LEU 2700.0170
THR 2710.0132
LEU 2720.0168
ARG 2730.0167
TRP 2740.0178
GLU 2750.0231
PRO 2760.0356
GLN 2780.0073
ARG 2790.0072
THR 2800.0074
PRO 2810.0074
LYS 2820.0072
ILE 2830.0092
GLN 2840.0094
VAL 2850.0083
TYR 2860.0092
SER 2870.0094
ARG 2880.0110
HIS 2890.0158
PRO 2900.0203
ALA 2910.0190
GLU 2920.0225
ASN 2930.0214
GLY 2940.0227
LYS 2950.0233
SER 2960.0191
ASN 2970.0146
PHE 2980.0087
LEU 2990.0070
ASN 3000.0067
CYS 3010.0062
TYR 3020.0072
VAL 3030.0063
SER 3040.0065
GLY 3050.0066
PHE 3060.0065
HIS 3070.0066
PRO 3080.0061
SER 3090.0059
ASP 3100.0050
ILE 3110.0039
GLU 3120.0036
VAL 3130.0063
ASP 3140.0062
LEU 3150.0059
LEU 3160.0061
LYS 3170.0065
ASN 3180.0072
GLY 3190.0093
GLU 3200.0103
ARG 3210.0104
ILE 3220.0100
GLU 3230.0123
LYS 3240.0121
VAL 3250.0080
GLU 3260.0076
HIS 3270.0052
SER 3280.0056
ASP 3290.0047
LEU 3300.0035
SER 3310.0040
PHE 3320.0044
SER 3330.0057
LYS 3340.0051
ASP 3350.0057
TRP 3360.0052
SER 3370.0064
PHE 3380.0056
TYR 3390.0054
LEU 3400.0048
LEU 3410.0048
TYR 3420.0043
TYR 3430.0048
THR 3440.0073
GLU 3450.0114
PHE 3460.0116
THR 3470.0143
PRO 3480.0124
THR 3490.0153
GLU 3500.0178
LYS 3510.0137
ASP 3520.0088
GLU 3530.0065
TYR 3540.0065
ALA 3550.0068
CYS 3560.0068
ARG 3570.0079
VAL 3580.0057
ASN 3590.0054
HIS 3600.0055
VAL 3610.0057
THR 3620.0051
LEU 3630.0046
SER 3640.0033
GLN 3650.0027
PRO 3660.0043
LYS 3670.0046
ILE 3680.0100
VAL 3690.0101
LYS 3700.0093
TRP 3710.0095
ASP 3720.0116
ARG 3730.0133
ASP 3740.0160
MET 3750.0171
SER 10.0053
GLN 20.0052
PHE 30.0044
ARG 40.0038
VAL 50.0030
SER 60.0026
PRO 70.0024
LEU 80.0029
ASP 90.0021
ARG 100.0024
THR 110.0054
TRP 120.0059
ASN 130.0067
LEU 140.0076
GLY 150.0073
GLU 160.0047
THR 170.0042
VAL 180.0038
GLU 190.0031
LEU 200.0029
LYS 210.0032
CYS 220.0038
GLN 230.0043
VAL 240.0048
LEU 250.0055
LEU 260.0074
SER 270.0080
ASN 280.0071
PRO 290.0061
THR 300.0052
SER 310.0016
GLY 320.0019
CYS 330.0017
SER 340.0008
TRP 350.0010
LEU 360.0014
PHE 370.0019
GLN 380.0026
PRO 390.0032
ARG 400.0039
GLY 410.0024
ALA 420.0034
ALA 430.0039
ALA 440.0029
SER 450.0034
PRO 460.0023
THR 470.0021
PHE 480.0019
LEU 490.0016
LEU 500.0015
TYR 510.0007
LEU 520.0025
SER 530.0041
GLN 540.0061
ASN 550.0059
LYS 560.0052
PRO 570.0033
LYS 580.0034
ALA 590.0027
ALA 600.0039
GLU 610.0066
GLY 620.0059
LEU 630.0041
ASP 640.0029
THR 650.0012
GLN 660.0024
ARG 670.0034
PHE 680.0025
SER 690.0016
GLY 700.0015
LYS 710.0031
ARG 720.0039
LEU 730.0048
GLY 740.0054
ASP 750.0052
THR 760.0042
PHE 770.0033
VAL 780.0030
LEU 790.0024
THR 800.0022
LEU 810.0037
SER 820.0045
ASP 830.0057
PHE 840.0057
ARG 850.0068
ARG 860.0060
GLU 870.0064
ASN 880.0054
GLU 890.0049
GLY 900.0046
TYR 910.0029
TYR 920.0024
PHE 930.0020
CYS 940.0015
SER 950.0013
ALA 960.0025
LEU 970.0025
SER 980.0038
ASN 990.0037
SER 1000.0020
ILE 1010.0011
MET 1020.0009
TYR 1030.0017
PHE 1040.0016
SER 1050.0025
HIS 1060.0040
PHE 1070.0033
VAL 1080.0029
PRO 1090.0026
VAL 1100.0027
PHE 1110.0062
LEU 1120.0063
PRO 1130.0069
ALA 1140.0072
SER 10.0073
GLN 20.0067
PHE 30.0057
ARG 40.0053
VAL 50.0047
SER 60.0028
PRO 70.0041
LEU 80.0055
ASP 90.0070
ARG 100.0080
THR 110.0087
TRP 120.0089
ASN 130.0109
LEU 140.0113
GLY 150.0098
GLU 160.0083
THR 170.0060
VAL 180.0052
GLU 190.0031
LEU 200.0027
LYS 210.0033
CYS 220.0041
GLN 230.0045
VAL 240.0053
LEU 250.0065
LEU 260.0073
SER 270.0081
ASN 280.0074
PRO 290.0065
THR 300.0058
SER 310.0036
GLY 320.0030
CYS 330.0031
SER 340.0029
TRP 350.0030
LEU 360.0034
PHE 370.0037
GLN 380.0044
PRO 390.0048
ARG 400.0054
GLY 410.0021
ALA 420.0046
ALA 430.0056
ALA 440.0033
SER 450.0037
PRO 460.0015
THR 470.0016
PHE 480.0016
LEU 490.0019
LEU 500.0021
TYR 510.0018
LEU 520.0023
SER 530.0025
GLN 540.0030
ASN 550.0021
LYS 560.0012
PRO 570.0013
LYS 580.0012
ALA 590.0013
ALA 600.0013
GLU 610.0013
GLY 620.0018
LEU 630.0020
ASP 640.0027
THR 650.0030
GLN 660.0024
ARG 670.0027
PHE 680.0030
SER 690.0023
GLY 700.0023
LYS 710.0017
ARG 720.0025
LEU 730.0028
GLY 740.0038
ASP 750.0046
THR 760.0032
PHE 770.0029
VAL 780.0024
LEU 790.0026
THR 800.0024
LEU 810.0036
SER 820.0044
ASP 830.0069
PHE 840.0078
ARG 850.0100
ARG 860.0121
GLU 870.0117
ASN 880.0081
GLU 890.0082
GLY 900.0069
TYR 910.0049
TYR 920.0043
PHE 930.0041
CYS 940.0039
SER 950.0044
ALA 960.0042
LEU 970.0038
SER 980.0049
ASN 990.0047
SER 1000.0033
ILE 1010.0042
MET 1020.0037
TYR 1030.0043
PHE 1040.0043
SER 1050.0048
HIS 1060.0050
PHE 1070.0051
VAL 1080.0043
PRO 1090.0053
VAL 1100.0055
PHE 1110.0083
LEU 1120.0105
PRO 1130.0119
ALA 1140.0138

If you find results from this site helpful for your research, please cite one of our papers:

elNémo is maintained by Yves-Henri Sanejouand.
It was developed by Karsten Suhre.
Between 2003 and 2014, it was hosted by IGS (Marseille).
Between 2015 and 2025, it was hosted by US2B (Nantes).
Last modification: april 24th, 2026.