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***  MHC1  ***

<R2> analysis for 2607180828532135053

---  normal mode 102  ---

This page gives a visualization of the normalized mean square displacement <R2> of all C-alpha atoms in the protein that are associated to this mode (black bars). The three components of the corresponding eigenvector are shown on the left (colored bars). Here is the raw data for <R2> and for the eigenvector (shift-click on the links for download).

XYZresidue<R2><R2>max = 0.0505
MET 10.0108
SER 20.0064
THR 30.0030
ILE 40.0079
THR 50.0079
LYS 60.0065
ASP 70.0046
GLN 80.0073
ILE 90.0060
LEU 100.0044
GLU 110.0078
GLY 120.0071
VAL 130.0033
ALA 140.0086
ALA 150.0096
LEU 160.0031
SER 170.0041
VAL 180.0043
MET 190.0010
GLU 200.0013
ILE 210.0046
VAL 220.0032
GLU 230.0045
LEU 240.0073
ILE 250.0075
SER 260.0049
ALA 270.0140
MET 280.0103
GLU 290.0030
GLU 300.0105
LYS 310.0107
PHE 320.0072
GLY 330.0179
VAL 340.0226
SER 350.0200
ALA 360.0145
ALA 370.0062
ALA 380.0101
VAL 390.0208
ALA 400.0210
ALA 410.0045
GLY 420.0079
PRO 430.0150
ALA 440.0150
ALA 450.0105
ALA 460.0167
VAL 470.0179
GLU 480.0054
ALA 490.0311
ALA 500.0397
GLU 510.0113
GLU 520.0099
GLN 530.0072
THR 540.0073
GLU 550.0051
PHE 560.0024
ASP 570.0025
VAL 580.0022
VAL 590.0024
LEU 600.0034
ALA 610.0050
SER 620.0041
PHE 630.0030
GLY 640.0044
GLU 650.0051
ASN 660.0046
LYS 670.0032
VAL 680.0033
ALA 690.0031
VAL 700.0021
ILE 710.0021
LYS 720.0032
ALA 730.0028
VAL 740.0015
ARG 750.0014
GLY 760.0016
ALA 770.0040
THR 780.0045
GLY 790.0040
LEU 800.0055
GLY 810.0096
LEU 820.0088
LYS 830.0103
GLU 840.0087
ALA 850.0039
LYS 860.0033
ASP 870.0032
LEU 880.0030
VAL 890.0012
GLU 900.0012
SER 910.0038
ALA 920.0037
PRO 930.0039
ALA 940.0035
VAL 950.0032
LEU 960.0038
LYS 970.0036
GLU 980.0034
GLY 990.0035
VAL 1000.0027
ASN 1010.0036
LYS 1020.0026
ASP 1030.0040
GLU 1040.0047
ALA 1050.0035
GLU 1060.0045
THR 1070.0048
LEU 1080.0043
LYS 1090.0041
LYS 1100.0048
SER 1110.0037
LEU 1120.0031
GLU 1130.0042
GLU 1140.0041
ALA 1150.0031
GLY 1160.0030
ALA 1170.0028
SER 1180.0031
VAL 1190.0031
GLU 1200.0035
ILE 1210.0018
LYS 1220.0019
GLU 1230.0037
ALA 1240.0051
ALA 1250.0060
ALA 1260.0122
LYS 1270.0112
ALA 1280.0096
TYR 1290.0092
LYS 1300.0074
ILE 1310.0017
ILE 1320.0058
SER 1330.0097
LEU 1340.0152
LYS 1350.0197
TYR 1360.0220
THR 1370.0156
ARG 1380.0114
LYS 1390.0050
VAL 1400.0052
CYS 1410.0137
ILE 1420.0179
GLY 1430.0243
PRO 1440.0273
GLY 1450.0350
PRO 1460.0134
GLY 1470.0302
LYS 1480.0266
ALA 1490.0206
TYR 1500.0098
LYS 1510.0059
ILE 1520.0037
ILE 1530.0059
SER 1540.0042
LEU 1550.0065
LYS 1560.0039
TYR 1570.0064
THR 1580.0053
ARG 1590.0081
LYS 1600.0072
VAL 1610.0072
CYS 1620.0085
GLY 1630.0120
PRO 1640.0142
GLY 1650.0144
PRO 1660.0196
GLY 1670.0161
GLY 1680.0281
LYS 1690.0210
ALA 1700.0129
TYR 1710.0135
LYS 1720.0102
ILE 1730.0078
ILE 1740.0073
SER 1750.0090
LEU 1760.0125
LYS 1770.0113
TYR 1780.0124
THR 1790.0116
ARG 1800.0124
LYS 1810.0111
VAL 1820.0056
GLY 1830.0108
PRO 1840.0135
GLY 1850.0133
PRO 1860.0127
GLY 1870.0082
ILE 1880.0047
ILE 1890.0025
SER 1900.0042
LEU 1910.0099
LYS 1920.0096
TYR 1930.0111
THR 1940.0107
ARG 1950.0124
LYS 1960.0082
VAL 1970.0064
CYS 1980.0040
ILE 1990.0062
GLN 2000.0105
LEU 2010.0088
GLY 2020.0083
GLY 2030.0075
PRO 2040.0063
GLY 2050.0055
PRO 2060.0064
GLY 2070.0064
ASN 2080.0065
ILE 2090.0066
LYS 2100.0064
THR 2110.0063
ALA 2120.0067
PHE 2130.0082
HIS 2140.0084
CYS 2150.0082
TYR 2160.0117
ALA 2170.0138
ALA 2180.0143
TYR 2190.0138
MET 2200.0156
THR 2210.0164
SER 2220.0171
ILE 2230.0182
LYS 2240.0166
ALA 2250.0172
CYS 2260.0176
ASP 2270.0162
LEU 2280.0120
LYS 2290.0079
LYS 2300.0046
PRO 2310.0050
LEU 2320.0037
MET 2330.0036
GLU 2340.0057
SER 2350.0083
GLY 2360.0032
TRP 2370.0024
SER 2380.0033
ASP 2390.0027
THR 2400.0038
ALA 2410.0023
HIS 2420.0018
GLY 2430.0015
LYS 2440.0015
LYS 2450.0028
SER 2460.0014
LEU 2470.0021
PRO 2480.0017
SER 2490.0033
SER 2500.0034
SER 2510.0023
SER 2520.0022
TYR 2530.0022
SER 2540.0022
TYR 2550.0022
ARG 2560.0019
ARG 2570.0020
LYS 2580.0021
LEU 2590.0024
THR 2600.0026
ASN 2610.0025
PRO 2620.0039
ALA 2630.0034
ASN 2640.0044
LYS 2650.0032
GLU 2660.0024
GLU 2670.0034
SER 2680.0036
ILE 2690.0041
LYS 2700.0053
LYS 2710.0026
GLN 2720.0009
LYS 2730.0019
TYR 2740.0020
SER 2750.0039
TYR 2760.0033
PRO 2770.0036
TRP 2780.0028
GLN 2790.0012
THR 2800.0011
SER 2810.0023
LYS 2820.0021
CYS 2830.0008
PHE 2840.0019
ASP 2880.0044
TYR 2890.0028
GLN 2900.0029
TYR 2910.0073
CYS 2970.0086
ASN 2980.0069
PRO 2990.0025
GLY 3000.0058
LYS 3010.0071
LYS 3020.0047
ASN 3030.0041
THR 3040.0065
ILE 3050.0062
SER 3060.0074
GLY 3070.0064
TYR 3080.0104
LYS 3090.0102
ARG 3100.0083
MET 3110.0111
MET 3120.0139
ALA 3130.0149
THR 3140.0156
LYS 3150.0167
ASP 3160.0205
SER 3170.0147
PHE 3180.0082
GLN 3190.0052
SER 3200.0062
PHE 3210.0101
ASN 3220.0088
LEU 3230.0070
THR 3240.0271
GLU 3250.0411
PRO 3260.0286
HIS 3270.0505
ILE 3280.0366
THR 3290.0274
THR 3300.0420
ASN 3310.0472
LYS 3320.0361
LEU 3330.0218
GLU 3340.0347
TRP 3350.0282
ILE 3360.0457
ASP 3370.0254
PRO 3380.0192
ASP 3390.0174
GLY 3400.0260
ASN 3410.0288
THR 3420.0378
ARG 3430.0088
GLY 3440.0163
GLY 3450.0137
GLY 3460.0154
GLY 10.0052
SER 20.0047
HIS 30.0050
SER 40.0055
MET 50.0063
ARG 60.0072
TYR 70.0066
PHE 80.0060
PHE 90.0058
THR 100.0056
SER 110.0061
VAL 120.0055
SER 130.0108
ARG 140.0151
PRO 150.0191
GLY 160.0410
ARG 170.0356
GLY 180.0289
GLU 190.0211
PRO 200.0119
ARG 210.0084
PHE 220.0070
ILE 230.0052
ALA 240.0054
VAL 250.0056
GLY 260.0041
TYR 270.0038
VAL 280.0034
ASP 290.0040
ASP 300.0040
THR 310.0061
GLN 320.0060
PHE 330.0061
VAL 340.0060
ARG 350.0061
PHE 360.0061
ASP 370.0061
SER 380.0082
ASP 390.0093
ALA 400.0076
ALA 410.0080
SER 420.0068
GLN 430.0071
ARG 440.0075
MET 450.0082
GLU 460.0080
PRO 470.0092
ARG 480.0091
ALA 490.0108
PRO 500.0125
TRP 510.0132
ILE 520.0121
GLU 530.0140
GLN 540.0157
GLU 550.0146
GLY 560.0168
PRO 570.0147
GLU 580.0157
TYR 590.0146
TRP 600.0120
ASP 610.0127
GLY 620.0150
GLU 630.0127
THR 640.0105
ARG 650.0133
LYS 660.0124
VAL 670.0096
LYS 680.0101
ALA 690.0123
HIS 700.0105
SER 710.0107
GLN 720.0144
THR 730.0146
HIS 740.0102
ARG 750.0113
VAL 760.0104
ASP 770.0098
LEU 780.0070
GLY 790.0070
THR 800.0086
LEU 810.0079
ARG 820.0078
GLY 830.0085
TYR 840.0085
TYR 850.0082
ASN 860.0086
GLN 870.0081
SER 880.0090
GLU 890.0090
ALA 900.0085
GLY 910.0050
SER 920.0048
HIS 930.0055
THR 940.0052
VAL 950.0067
GLN 960.0059
ARG 970.0063
MET 980.0070
TYR 990.0076
GLY 1000.0085
CYS 1010.0054
ASP 1020.0049
VAL 1030.0043
GLY 1040.0044
SER 1050.0053
ASP 1060.0046
TRP 1070.0042
ARG 1080.0026
PHE 1090.0019
LEU 1100.0017
ARG 1110.0021
GLY 1120.0031
TYR 1130.0042
HIS 1140.0053
GLN 1150.0063
TYR 1160.0072
ALA 1170.0069
TYR 1180.0067
ASP 1190.0064
GLY 1200.0065
LYS 1210.0068
ASP 1220.0063
TYR 1230.0067
ILE 1240.0061
ALA 1250.0054
LEU 1260.0025
LYS 1270.0057
GLU 1280.0074
ASP 1290.0096
LEU 1300.0065
ARG 1310.0120
SER 1320.0091
TRP 1330.0039
THR 1340.0054
ALA 1350.0050
ALA 1360.0066
ASP 1370.0078
MET 1380.0079
ALA 1390.0081
ALA 1400.0067
GLN 1410.0040
THR 1420.0040
THR 1430.0057
LYS 1440.0024
HIS 1450.0050
LYS 1460.0109
TRP 1470.0115
GLU 1480.0139
ALA 1490.0189
ALA 1500.0213
HIS 1510.0242
VAL 1520.0185
ALA 1530.0128
GLU 1540.0202
GLN 1550.0226
LEU 1560.0114
ARG 1570.0091
ALA 1580.0116
TYR 1590.0106
LEU 1600.0052
GLU 1610.0047
GLY 1620.0064
THR 1630.0091
CYS 1640.0081
VAL 1650.0056
GLU 1660.0064
TRP 1670.0080
LEU 1680.0073
ARG 1690.0073
ARG 1700.0088
TYR 1710.0082
LEU 1720.0078
GLU 1730.0075
ASN 1740.0084
GLY 1750.0090
LYS 1760.0074
GLU 1770.0084
THR 1780.0084
LEU 1790.0072
GLN 1800.0066
ARG 1810.0068
THR 1820.0048
ASP 1830.0031
ALA 1840.0014
PRO 1850.0023
LYS 1860.0064
THR 1870.0074
HIS 1880.0079
MET 1890.0096
THR 1900.0104
HIS 1910.0114
HIS 1920.0131
ALA 1930.0140
VAL 1940.0147
SER 1950.0157
ASP 1960.0155
HIS 1970.0134
GLU 1980.0126
ALA 1990.0131
THR 2000.0129
LEU 2010.0110
ARG 2020.0104
CYS 2030.0096
TRP 2040.0090
ALA 2050.0084
LEU 2060.0042
SER 2070.0038
PHE 2080.0043
TYR 2090.0054
PRO 2100.0064
ALA 2110.0090
GLU 2120.0098
ILE 2130.0092
THR 2140.0107
LEU 2150.0105
THR 2160.0122
TRP 2170.0119
GLN 2180.0119
ARG 2190.0116
ASP 2200.0122
GLY 2210.0136
GLU 2220.0120
ASP 2230.0111
GLN 2240.0094
THR 2250.0090
GLN 2260.0068
ASP 2270.0078
THR 2280.0087
GLU 2290.0093
LEU 2300.0101
VAL 2310.0082
GLU 2320.0082
THR 2330.0074
ARG 2340.0066
PRO 2350.0060
ALA 2360.0042
GLY 2370.0056
ASP 2380.0058
GLY 2390.0070
THR 2400.0054
PHE 2410.0065
GLN 2420.0063
LYS 2430.0077
TRP 2440.0084
ALA 2450.0101
ALA 2460.0115
VAL 2470.0112
VAL 2480.0113
VAL 2490.0112
PRO 2500.0112
SER 2510.0133
GLY 2520.0132
GLN 2530.0127
GLU 2540.0132
GLN 2550.0133
ARG 2560.0121
TYR 2570.0123
THR 2580.0126
CYS 2590.0128
HIS 2600.0128
VAL 2610.0101
GLN 2620.0106
HIS 2630.0089
GLU 2640.0083
GLY 2650.0058
LEU 2660.0111
PRO 2670.0149
LYS 2680.0165
PRO 2690.0149
LEU 2700.0125
THR 2710.0129
LEU 2720.0135
ARG 2730.0133
TRP 2740.0135
GLU 2750.0138
PRO 2760.0177
GLN 2780.0040
ARG 2790.0030
THR 2800.0030
PRO 2810.0029
LYS 2820.0037
ILE 2830.0050
GLN 2840.0037
VAL 2850.0019
TYR 2860.0012
SER 2870.0010
ARG 2880.0020
HIS 2890.0022
PRO 2900.0040
ALA 2910.0054
GLU 2920.0080
ASN 2930.0104
GLY 2940.0115
LYS 2950.0098
SER 2960.0088
ASN 2970.0061
PHE 2980.0039
LEU 2990.0028
ASN 3000.0024
CYS 3010.0029
TYR 3020.0040
VAL 3030.0035
SER 3040.0027
GLY 3050.0026
PHE 3060.0023
HIS 3070.0025
PRO 3080.0027
SER 3090.0017
ASP 3100.0018
ILE 3110.0029
GLU 3120.0043
VAL 3130.0065
ASP 3140.0053
LEU 3150.0035
LEU 3160.0032
LYS 3170.0041
ASN 3180.0040
GLY 3190.0033
GLU 3200.0059
ARG 3210.0070
ILE 3220.0074
GLU 3230.0094
LYS 3240.0090
VAL 3250.0062
GLU 3260.0052
HIS 3270.0038
SER 3280.0028
ASP 3290.0023
LEU 3300.0025
SER 3310.0034
PHE 3320.0041
SER 3330.0029
LYS 3340.0035
ASP 3350.0035
TRP 3360.0037
SER 3370.0029
PHE 3380.0028
TYR 3390.0025
LEU 3400.0020
LEU 3410.0023
TYR 3420.0028
TYR 3430.0044
THR 3440.0056
GLU 3450.0064
PHE 3460.0064
THR 3470.0073
PRO 3480.0071
THR 3490.0122
GLU 3500.0145
LYS 3510.0145
ASP 3520.0094
GLU 3530.0040
TYR 3540.0024
ALA 3550.0009
CYS 3560.0030
ARG 3570.0048
VAL 3580.0051
ASN 3590.0046
HIS 3600.0036
VAL 3610.0034
THR 3620.0042
LEU 3630.0040
SER 3640.0043
GLN 3650.0046
PRO 3660.0047
LYS 3670.0051
ILE 3680.0043
VAL 3690.0035
LYS 3700.0017
TRP 3710.0011
ASP 3720.0029
ARG 3730.0034
ASP 3740.0068
MET 3750.0082
SER 10.0044
GLN 20.0042
PHE 30.0050
ARG 40.0063
VAL 50.0066
SER 60.0087
PRO 70.0106
LEU 80.0108
ASP 90.0135
ARG 100.0148
THR 110.0159
TRP 120.0161
ASN 130.0161
LEU 140.0162
GLY 150.0163
GLU 160.0185
THR 170.0154
VAL 180.0134
GLU 190.0111
LEU 200.0090
LYS 210.0080
CYS 220.0066
GLN 230.0071
VAL 240.0054
LEU 250.0060
LEU 260.0066
SER 270.0075
ASN 280.0074
PRO 290.0067
THR 300.0067
SER 310.0089
GLY 320.0073
CYS 330.0044
SER 340.0015
TRP 350.0018
LEU 360.0026
PHE 370.0056
GLN 380.0073
PRO 390.0104
ARG 400.0122
GLY 410.0072
ALA 420.0069
ALA 430.0059
ALA 440.0050
SER 450.0039
PRO 460.0046
THR 470.0058
PHE 480.0047
LEU 490.0046
LEU 500.0031
TYR 510.0045
LEU 520.0061
SER 530.0104
GLN 540.0145
ASN 550.0141
LYS 560.0124
PRO 570.0079
LYS 580.0093
ALA 590.0082
ALA 600.0114
GLU 610.0210
GLY 620.0211
LEU 630.0156
ASP 640.0141
THR 650.0066
GLN 660.0115
ARG 670.0136
PHE 680.0098
SER 690.0064
GLY 700.0054
LYS 710.0071
ARG 720.0095
LEU 730.0134
GLY 740.0149
ASP 750.0125
THR 760.0108
PHE 770.0071
VAL 780.0076
LEU 790.0069
THR 800.0095
LEU 810.0143
SER 820.0163
ASP 830.0180
PHE 840.0172
ARG 850.0181
ARG 860.0137
GLU 870.0158
ASN 880.0168
GLU 890.0139
GLY 900.0140
TYR 910.0095
TYR 920.0074
PHE 930.0048
CYS 940.0027
SER 950.0014
ALA 960.0046
LEU 970.0055
SER 980.0067
ASN 990.0072
SER 1000.0058
ILE 1010.0043
MET 1020.0028
TYR 1030.0027
PHE 1040.0019
SER 1050.0032
HIS 1060.0051
PHE 1070.0072
VAL 1080.0094
PRO 1090.0121
VAL 1100.0136
PHE 1110.0159
LEU 1120.0157
PRO 1130.0171
ALA 1140.0185
SER 10.0095
GLN 20.0075
PHE 30.0068
ARG 40.0082
VAL 50.0078
SER 60.0100
PRO 70.0124
LEU 80.0141
ASP 90.0182
ARG 100.0176
THR 110.0166
TRP 120.0137
ASN 130.0143
LEU 140.0119
GLY 150.0080
GLU 160.0097
THR 170.0081
VAL 180.0077
GLU 190.0082
LEU 200.0074
LYS 210.0078
CYS 220.0068
GLN 230.0069
VAL 240.0057
LEU 250.0076
LEU 260.0076
SER 270.0094
ASN 280.0084
PRO 290.0065
THR 300.0053
SER 310.0046
GLY 320.0028
CYS 330.0028
SER 340.0019
TRP 350.0018
LEU 360.0022
PHE 370.0032
GLN 380.0039
PRO 390.0050
ARG 400.0054
GLY 410.0035
ALA 420.0055
ALA 430.0049
ALA 440.0020
SER 450.0010
PRO 460.0017
THR 470.0011
PHE 480.0010
LEU 490.0003
LEU 500.0003
TYR 510.0022
LEU 520.0024
SER 530.0031
GLN 540.0033
ASN 550.0024
LYS 560.0022
PRO 570.0019
LYS 580.0014
ALA 590.0016
ALA 600.0016
GLU 610.0044
GLY 620.0074
LEU 630.0056
ASP 640.0081
THR 650.0078
GLN 660.0099
ARG 670.0064
PHE 680.0052
SER 690.0068
GLY 700.0070
LYS 710.0060
ARG 720.0054
LEU 730.0076
GLY 740.0074
ASP 750.0076
THR 760.0073
PHE 770.0054
VAL 780.0062
LEU 790.0049
THR 800.0064
LEU 810.0043
SER 820.0047
ASP 830.0043
PHE 840.0067
ARG 850.0097
ARG 860.0159
GLU 870.0151
ASN 880.0090
GLU 890.0107
GLY 900.0084
TYR 910.0050
TYR 920.0041
PHE 930.0039
CYS 940.0033
SER 950.0034
ALA 960.0048
LEU 970.0062
SER 980.0084
ASN 990.0097
SER 1000.0082
ILE 1010.0082
MET 1020.0063
TYR 1030.0060
PHE 1040.0050
SER 1050.0052
HIS 1060.0039
PHE 1070.0055
VAL 1080.0055
PRO 1090.0081
VAL 1100.0084
PHE 1110.0122
LEU 1120.0169
PRO 1130.0227
ALA 1140.0274

If you find results from this site helpful for your research, please cite one of our papers:

elNémo is maintained by Yves-Henri Sanejouand.
It was developed by Karsten Suhre.
Between 2003 and 2014, it was hosted by IGS (Marseille).
Between 2015 and 2025, it was hosted by US2B (Nantes).
Last modification: april 24th, 2026.