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***  MHC1  ***

<R2> analysis for 2607180828532135053

---  normal mode 103  ---

This page gives a visualization of the normalized mean square displacement <R2> of all C-alpha atoms in the protein that are associated to this mode (black bars). The three components of the corresponding eigenvector are shown on the left (colored bars). Here is the raw data for <R2> and for the eigenvector (shift-click on the links for download).

XYZresidue<R2><R2>max = 0.0547
MET 10.0037
SER 20.0023
THR 30.0008
ILE 40.0027
THR 50.0029
LYS 60.0025
ASP 70.0017
GLN 80.0024
ILE 90.0020
LEU 100.0018
GLU 110.0030
GLY 120.0026
VAL 130.0012
ALA 140.0029
ALA 150.0033
LEU 160.0008
SER 170.0005
VAL 180.0009
MET 190.0013
GLU 200.0011
ILE 210.0015
VAL 220.0014
GLU 230.0016
LEU 240.0019
ILE 250.0020
SER 260.0014
ALA 270.0037
MET 280.0028
GLU 290.0007
GLU 300.0027
LYS 310.0027
PHE 320.0020
GLY 330.0045
VAL 340.0059
SER 350.0051
ALA 360.0037
ALA 370.0030
ALA 380.0027
VAL 390.0054
ALA 400.0062
ALA 410.0016
GLY 420.0018
PRO 430.0035
ALA 440.0033
ALA 450.0037
ALA 460.0063
VAL 470.0043
GLU 480.0036
ALA 490.0102
ALA 500.0101
GLU 510.0011
GLU 520.0037
GLN 530.0020
THR 540.0033
GLU 550.0048
PHE 560.0051
ASP 570.0050
VAL 580.0043
VAL 590.0040
LEU 600.0043
ALA 610.0071
SER 620.0072
PHE 630.0065
GLY 640.0069
GLU 650.0084
ASN 660.0071
LYS 670.0092
VAL 680.0108
ALA 690.0079
VAL 700.0049
ILE 710.0079
LYS 720.0099
ALA 730.0068
VAL 740.0040
ARG 750.0076
GLY 760.0083
ALA 770.0053
THR 780.0034
GLY 790.0054
LEU 800.0096
GLY 810.0167
LEU 820.0177
LYS 830.0209
GLU 840.0174
ALA 850.0102
LYS 860.0091
ASP 870.0116
LEU 880.0096
VAL 890.0063
GLU 900.0087
SER 910.0076
ALA 920.0073
PRO 930.0074
ALA 940.0062
VAL 950.0051
LEU 960.0044
LYS 970.0053
GLU 980.0065
GLY 990.0077
VAL 1000.0067
ASN 1010.0067
LYS 1020.0054
ASP 1030.0062
GLU 1040.0064
ALA 1050.0049
GLU 1060.0051
THR 1070.0048
LEU 1080.0039
LYS 1090.0034
LYS 1100.0034
SER 1110.0033
LEU 1120.0014
GLU 1130.0019
GLU 1140.0031
ALA 1150.0024
GLY 1160.0028
ALA 1170.0026
SER 1180.0033
VAL 1190.0040
GLU 1200.0054
ILE 1210.0044
LYS 1220.0033
GLU 1230.0043
ALA 1240.0054
ALA 1250.0079
ALA 1260.0179
LYS 1270.0171
ALA 1280.0151
TYR 1290.0143
LYS 1300.0124
ILE 1310.0070
ILE 1320.0022
SER 1330.0051
LEU 1340.0095
LYS 1350.0145
TYR 1360.0155
THR 1370.0116
ARG 1380.0092
LYS 1390.0052
VAL 1400.0048
CYS 1410.0120
ILE 1420.0183
GLY 1430.0244
PRO 1440.0281
GLY 1450.0363
PRO 1460.0159
GLY 1470.0261
LYS 1480.0220
ALA 1490.0192
TYR 1500.0090
LYS 1510.0017
ILE 1520.0021
ILE 1530.0025
SER 1540.0034
LEU 1550.0035
LYS 1560.0038
TYR 1570.0017
THR 1580.0021
ARG 1590.0006
LYS 1600.0013
VAL 1610.0012
CYS 1620.0041
GLY 1630.0080
PRO 1640.0086
GLY 1650.0065
PRO 1660.0058
GLY 1670.0170
GLY 1680.0219
LYS 1690.0190
ALA 1700.0115
TYR 1710.0104
LYS 1720.0063
ILE 1730.0044
ILE 1740.0017
SER 1750.0060
LEU 1760.0109
LYS 1770.0118
TYR 1780.0105
THR 1790.0108
ARG 1800.0094
LYS 1810.0073
VAL 1820.0024
GLY 1830.0082
PRO 1840.0121
GLY 1850.0124
PRO 1860.0110
GLY 1870.0065
ILE 1880.0033
ILE 1890.0037
SER 1900.0051
LEU 1910.0073
LYS 1920.0074
TYR 1930.0064
THR 1940.0061
ARG 1950.0054
LYS 1960.0021
VAL 1970.0042
CYS 1980.0079
ILE 1990.0113
GLN 2000.0163
LEU 2010.0154
GLY 2020.0164
GLY 2030.0134
PRO 2040.0096
GLY 2050.0117
PRO 2060.0086
GLY 2070.0092
ASN 2080.0091
ILE 2090.0082
LYS 2100.0087
THR 2110.0076
ALA 2120.0078
PHE 2130.0080
HIS 2140.0073
CYS 2150.0068
TYR 2160.0063
ALA 2170.0060
ALA 2180.0046
TYR 2190.0044
MET 2200.0048
THR 2210.0045
SER 2220.0049
ILE 2230.0054
LYS 2240.0066
ALA 2250.0076
CYS 2260.0129
ASP 2270.0131
LEU 2280.0016
LYS 2290.0040
LYS 2300.0079
PRO 2310.0073
LEU 2320.0067
MET 2330.0046
GLU 2340.0046
SER 2350.0041
GLY 2360.0025
TRP 2370.0025
SER 2380.0037
ASP 2390.0035
THR 2400.0049
ALA 2410.0042
HIS 2420.0038
GLY 2430.0036
LYS 2440.0038
LYS 2450.0058
SER 2460.0016
LEU 2470.0015
PRO 2480.0029
SER 2490.0028
SER 2500.0025
SER 2510.0048
SER 2520.0047
TYR 2530.0034
SER 2540.0035
TYR 2550.0025
ARG 2560.0009
ARG 2570.0018
LYS 2580.0021
LEU 2590.0029
THR 2600.0035
ASN 2610.0022
PRO 2620.0012
ALA 2630.0027
ASN 2640.0039
LYS 2650.0030
GLU 2660.0014
GLU 2670.0015
SER 2680.0026
ILE 2690.0033
LYS 2700.0044
LYS 2710.0015
GLN 2720.0011
LYS 2730.0033
TYR 2740.0050
SER 2750.0074
TYR 2760.0037
PRO 2770.0044
TRP 2780.0033
GLN 2790.0029
THR 2800.0019
SER 2810.0044
LYS 2820.0035
CYS 2830.0018
PHE 2840.0034
ASP 2880.0007
TYR 2890.0004
GLN 2900.0007
TYR 2910.0012
CYS 2970.0043
ASN 2980.0022
PRO 2990.0093
GLY 3000.0085
LYS 3010.0045
LYS 3020.0074
ASN 3030.0042
THR 3040.0062
ILE 3050.0079
SER 3060.0103
GLY 3070.0089
TYR 3080.0087
LYS 3090.0068
ARG 3100.0041
MET 3110.0043
MET 3120.0053
ALA 3130.0068
THR 3140.0083
LYS 3150.0090
ASP 3160.0127
SER 3170.0082
PHE 3180.0068
GLN 3190.0059
SER 3200.0077
PHE 3210.0096
ASN 3220.0087
LEU 3230.0084
THR 3240.0084
GLU 3250.0088
PRO 3260.0082
HIS 3270.0135
ILE 3280.0216
THR 3290.0265
THR 3300.0354
ASN 3310.0309
LYS 3320.0141
LEU 3330.0140
GLU 3340.0116
TRP 3350.0124
ILE 3360.0145
ASP 3370.0173
PRO 3380.0154
ASP 3390.0153
GLY 3400.0192
ASN 3410.0187
THR 3420.0185
ARG 3430.0068
GLY 3440.0084
GLY 3450.0130
GLY 3460.0159
GLY 10.0063
SER 20.0071
HIS 30.0072
SER 40.0086
MET 50.0089
ARG 60.0080
TYR 70.0062
PHE 80.0055
PHE 90.0039
THR 100.0041
SER 110.0039
VAL 120.0106
SER 130.0143
ARG 140.0222
PRO 150.0266
GLY 160.0501
ARG 170.0441
GLY 180.0347
GLU 190.0235
PRO 200.0136
ARG 210.0075
PHE 220.0048
ILE 230.0040
ALA 240.0028
VAL 250.0050
GLY 260.0076
TYR 270.0068
VAL 280.0067
ASP 290.0078
ASP 300.0080
THR 310.0083
GLN 320.0059
PHE 330.0052
VAL 340.0035
ARG 350.0032
PHE 360.0033
ASP 370.0060
SER 380.0079
ASP 390.0107
ALA 400.0102
ALA 410.0136
SER 420.0109
GLN 430.0095
ARG 440.0064
MET 450.0035
GLU 460.0041
PRO 470.0046
ARG 480.0060
ALA 490.0075
PRO 500.0088
TRP 510.0083
ILE 520.0065
GLU 530.0072
GLN 540.0081
GLU 550.0063
GLY 560.0037
PRO 570.0030
GLU 580.0025
TYR 590.0025
TRP 600.0025
ASP 610.0051
GLY 620.0056
GLU 630.0032
THR 640.0048
ARG 650.0076
LYS 660.0063
VAL 670.0038
LYS 680.0068
ALA 690.0080
HIS 700.0053
SER 710.0062
GLN 720.0103
THR 730.0084
HIS 740.0042
ARG 750.0088
VAL 760.0068
ASP 770.0050
LEU 780.0069
GLY 790.0082
THR 800.0063
LEU 810.0076
ARG 820.0103
GLY 830.0097
TYR 840.0084
TYR 850.0115
ASN 860.0122
GLN 870.0141
SER 880.0161
GLU 890.0174
ALA 900.0189
GLY 910.0164
SER 920.0136
HIS 930.0103
THR 940.0081
VAL 950.0052
GLN 960.0060
ARG 970.0059
MET 980.0074
TYR 990.0080
GLY 1000.0096
CYS 1010.0113
ASP 1020.0102
VAL 1030.0089
GLY 1040.0080
SER 1050.0066
ASP 1060.0069
TRP 1070.0071
ARG 1080.0086
PHE 1090.0103
LEU 1100.0115
ARG 1110.0111
GLY 1120.0103
TYR 1130.0094
HIS 1140.0085
GLN 1150.0081
TYR 1160.0069
ALA 1170.0077
TYR 1180.0075
ASP 1190.0091
GLY 1200.0101
LYS 1210.0101
ASP 1220.0097
TYR 1230.0090
ILE 1240.0087
ALA 1250.0089
LEU 1260.0109
LYS 1270.0106
GLU 1280.0112
ASP 1290.0108
LEU 1300.0111
ARG 1310.0105
SER 1320.0097
TRP 1330.0097
THR 1340.0097
ALA 1350.0096
ALA 1360.0100
ASP 1370.0096
MET 1380.0087
ALA 1390.0085
ALA 1400.0085
GLN 1410.0080
THR 1420.0077
THR 1430.0082
LYS 1440.0080
HIS 1450.0078
LYS 1460.0096
TRP 1470.0103
GLU 1480.0101
ALA 1490.0115
ALA 1500.0127
HIS 1510.0148
VAL 1520.0141
ALA 1530.0126
GLU 1540.0145
GLN 1550.0167
LEU 1560.0124
ARG 1570.0117
ALA 1580.0118
TYR 1590.0118
LEU 1600.0109
GLU 1610.0115
GLY 1620.0108
THR 1630.0106
CYS 1640.0105
VAL 1650.0096
GLU 1660.0078
TRP 1670.0074
LEU 1680.0079
ARG 1690.0067
ARG 1700.0058
TYR 1710.0064
LEU 1720.0067
GLU 1730.0066
ASN 1740.0065
GLY 1750.0067
LYS 1760.0078
GLU 1770.0072
THR 1780.0068
LEU 1790.0068
GLN 1800.0081
ARG 1810.0130
THR 1820.0153
ASP 1830.0201
ALA 1840.0229
PRO 1850.0254
LYS 1860.0314
THR 1870.0270
HIS 1880.0254
MET 1890.0227
THR 1900.0246
HIS 1910.0259
HIS 1920.0334
ALA 1930.0347
VAL 1940.0421
SER 1950.0472
ASP 1960.0547
HIS 1970.0461
GLU 1980.0347
ALA 1990.0283
THR 2000.0260
LEU 2010.0175
ARG 2020.0198
CYS 2030.0198
TRP 2040.0233
ALA 2050.0254
LEU 2060.0245
SER 2070.0229
PHE 2080.0195
TYR 2090.0161
PRO 2100.0134
ALA 2110.0180
GLU 2120.0157
ILE 2130.0165
THR 2140.0157
LEU 2150.0175
THR 2160.0170
TRP 2170.0121
GLN 2180.0117
ARG 2190.0129
ASP 2200.0179
GLY 2210.0190
GLU 2220.0160
ASP 2230.0129
GLN 2240.0074
THR 2250.0095
GLN 2260.0073
ASP 2270.0077
THR 2280.0106
GLU 2290.0136
LEU 2300.0165
VAL 2310.0162
GLU 2320.0157
THR 2330.0155
ARG 2340.0150
PRO 2350.0145
ALA 2360.0188
GLY 2370.0216
ASP 2380.0231
GLY 2390.0222
THR 2400.0190
PHE 2410.0185
GLN 2420.0185
LYS 2430.0183
TRP 2440.0183
ALA 2450.0182
ALA 2460.0189
VAL 2470.0136
VAL 2480.0173
VAL 2490.0177
PRO 2500.0256
SER 2510.0319
GLY 2520.0297
GLN 2530.0236
GLU 2540.0166
GLN 2550.0154
ARG 2560.0141
TYR 2570.0106
THR 2580.0117
CYS 2590.0155
HIS 2600.0207
VAL 2610.0200
GLN 2620.0163
HIS 2630.0169
GLU 2640.0155
GLY 2650.0206
LEU 2660.0262
PRO 2670.0290
LYS 2680.0258
PRO 2690.0200
LEU 2700.0236
THR 2710.0212
LEU 2720.0193
ARG 2730.0141
TRP 2740.0137
GLU 2750.0114
PRO 2760.0183
GLN 2780.0020
ARG 2790.0018
THR 2800.0040
PRO 2810.0058
LYS 2820.0081
ILE 2830.0117
GLN 2840.0093
VAL 2850.0073
TYR 2860.0067
SER 2870.0077
ARG 2880.0165
HIS 2890.0195
PRO 2900.0209
ALA 2910.0177
GLU 2920.0245
ASN 2930.0296
GLY 2940.0289
LYS 2950.0261
SER 2960.0181
ASN 2970.0151
PHE 2980.0097
LEU 2990.0068
ASN 3000.0076
CYS 3010.0080
TYR 3020.0102
VAL 3030.0081
SER 3040.0066
GLY 3050.0048
PHE 3060.0034
HIS 3070.0018
PRO 3080.0046
SER 3090.0054
ASP 3100.0050
ILE 3110.0053
GLU 3120.0059
VAL 3130.0139
ASP 3140.0118
LEU 3150.0074
LEU 3160.0100
LYS 3170.0115
ASN 3180.0218
GLY 3190.0230
GLU 3200.0210
ARG 3210.0178
ILE 3220.0110
GLU 3230.0124
LYS 3240.0143
VAL 3250.0113
GLU 3260.0135
HIS 3270.0118
SER 3280.0038
ASP 3290.0019
LEU 3300.0018
SER 3310.0022
PHE 3320.0026
SER 3330.0036
LYS 3340.0047
ASP 3350.0041
TRP 3360.0045
SER 3370.0033
PHE 3380.0028
TYR 3390.0048
LEU 3400.0067
LEU 3410.0087
TYR 3420.0103
TYR 3430.0112
THR 3440.0074
GLU 3450.0063
PHE 3460.0069
THR 3470.0126
PRO 3480.0192
THR 3490.0271
GLU 3500.0345
LYS 3510.0350
ASP 3520.0257
GLU 3530.0134
TYR 3540.0084
ALA 3550.0069
CYS 3560.0071
ARG 3570.0122
VAL 3580.0067
ASN 3590.0054
HIS 3600.0047
VAL 3610.0037
THR 3620.0039
LEU 3630.0039
SER 3640.0032
GLN 3650.0034
PRO 3660.0043
LYS 3670.0055
ILE 3680.0101
VAL 3690.0080
LYS 3700.0059
TRP 3710.0016
ASP 3720.0019
ARG 3730.0090
ASP 3740.0129
MET 3750.0224
SER 10.0049
GLN 20.0035
PHE 30.0041
ARG 40.0056
VAL 50.0064
SER 60.0068
PRO 70.0065
LEU 80.0064
ASP 90.0061
ARG 100.0057
THR 110.0038
TRP 120.0028
ASN 130.0014
LEU 140.0021
GLY 150.0039
GLU 160.0037
THR 170.0042
VAL 180.0046
GLU 190.0052
LEU 200.0058
LYS 210.0057
CYS 220.0049
GLN 230.0044
VAL 240.0039
LEU 250.0037
LEU 260.0048
SER 270.0083
ASN 280.0104
PRO 290.0075
THR 300.0095
SER 310.0078
GLY 320.0071
CYS 330.0052
SER 340.0052
TRP 350.0055
LEU 360.0057
PHE 370.0060
GLN 380.0062
PRO 390.0066
ARG 400.0066
GLY 410.0079
ALA 420.0069
ALA 430.0063
ALA 440.0069
SER 450.0066
PRO 460.0064
THR 470.0073
PHE 480.0073
LEU 490.0075
LEU 500.0073
TYR 510.0071
LEU 520.0070
SER 530.0081
GLN 540.0100
ASN 550.0116
LYS 560.0127
PRO 570.0109
LYS 580.0111
ALA 590.0112
ALA 600.0109
GLU 610.0145
GLY 620.0140
LEU 630.0117
ASP 640.0105
THR 650.0096
GLN 660.0073
ARG 670.0067
PHE 680.0065
SER 690.0061
GLY 700.0056
LYS 710.0065
ARG 720.0060
LEU 730.0054
GLY 740.0055
ASP 750.0052
THR 760.0048
PHE 770.0050
VAL 780.0052
LEU 790.0055
THR 800.0060
LEU 810.0037
SER 820.0041
ASP 830.0044
PHE 840.0042
ARG 850.0043
ARG 860.0027
GLU 870.0040
ASN 880.0046
GLU 890.0047
GLY 900.0063
TYR 910.0055
TYR 920.0051
PHE 930.0043
CYS 940.0040
SER 950.0040
ALA 960.0039
LEU 970.0050
SER 980.0075
ASN 990.0091
SER 1000.0068
ILE 1010.0060
MET 1020.0036
TYR 1030.0021
PHE 1040.0017
SER 1050.0032
HIS 1060.0055
PHE 1070.0055
VAL 1080.0057
PRO 1090.0057
VAL 1100.0058
PHE 1110.0034
LEU 1120.0019
PRO 1130.0027
ALA 1140.0041
SER 10.0078
GLN 20.0080
PHE 30.0075
ARG 40.0075
VAL 50.0066
SER 60.0073
PRO 70.0073
LEU 80.0073
ASP 90.0076
ARG 100.0071
THR 110.0060
TRP 120.0054
ASN 130.0046
LEU 140.0040
GLY 150.0044
GLU 160.0052
THR 170.0053
VAL 180.0054
GLU 190.0057
LEU 200.0058
LYS 210.0054
CYS 220.0060
GLN 230.0068
VAL 240.0072
LEU 250.0080
LEU 260.0067
SER 270.0082
ASN 280.0080
PRO 290.0065
THR 300.0064
SER 310.0036
GLY 320.0036
CYS 330.0035
SER 340.0031
TRP 350.0032
LEU 360.0033
PHE 370.0028
GLN 380.0029
PRO 390.0028
ARG 400.0035
GLY 410.0053
ALA 420.0056
ALA 430.0050
ALA 440.0044
SER 450.0039
PRO 460.0021
THR 470.0013
PHE 480.0024
LEU 490.0028
LEU 500.0041
TYR 510.0052
LEU 520.0047
SER 530.0050
GLN 540.0063
ASN 550.0062
LYS 560.0033
PRO 570.0036
LYS 580.0043
ALA 590.0049
ALA 600.0057
GLU 610.0046
GLY 620.0052
LEU 630.0055
ASP 640.0059
THR 650.0054
GLN 660.0051
ARG 670.0050
PHE 680.0052
SER 690.0054
GLY 700.0056
LYS 710.0047
ARG 720.0051
LEU 730.0063
GLY 740.0064
ASP 750.0062
THR 760.0060
PHE 770.0053
VAL 780.0054
LEU 790.0049
THR 800.0051
LEU 810.0054
SER 820.0049
ASP 830.0041
PHE 840.0040
ARG 850.0037
ARG 860.0037
GLU 870.0038
ASN 880.0038
GLU 890.0039
GLY 900.0040
TYR 910.0038
TYR 920.0039
PHE 930.0044
CYS 940.0048
SER 950.0048
ALA 960.0045
LEU 970.0051
SER 980.0065
ASN 990.0072
SER 1000.0059
ILE 1010.0067
MET 1020.0058
TYR 1030.0063
PHE 1040.0058
SER 1050.0063
HIS 1060.0065
PHE 1070.0058
VAL 1080.0058
PRO 1090.0054
VAL 1100.0048
PHE 1110.0049
LEU 1120.0049
PRO 1130.0057
ALA 1140.0056

If you find results from this site helpful for your research, please cite one of our papers:

elNémo is maintained by Yves-Henri Sanejouand.
It was developed by Karsten Suhre.
Between 2003 and 2014, it was hosted by IGS (Marseille).
Between 2015 and 2025, it was hosted by US2B (Nantes).
Last modification: april 24th, 2026.