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***  MHC1  ***

<R2> analysis for 2607180828532135053

---  normal mode 105  ---

This page gives a visualization of the normalized mean square displacement <R2> of all C-alpha atoms in the protein that are associated to this mode (black bars). The three components of the corresponding eigenvector are shown on the left (colored bars). Here is the raw data for <R2> and for the eigenvector (shift-click on the links for download).

XYZresidue<R2><R2>max = 0.0738
MET 10.0108
SER 20.0058
THR 30.0033
ILE 40.0088
THR 50.0082
LYS 60.0074
ASP 70.0059
GLN 80.0085
ILE 90.0072
LEU 100.0050
GLU 110.0071
GLY 120.0067
VAL 130.0050
ALA 140.0079
ALA 150.0073
LEU 160.0028
SER 170.0040
VAL 180.0045
MET 190.0010
GLU 200.0014
ILE 210.0053
VAL 220.0033
GLU 230.0056
LEU 240.0088
ILE 250.0087
SER 260.0064
ALA 270.0149
MET 280.0118
GLU 290.0024
GLU 300.0090
LYS 310.0093
PHE 320.0094
GLY 330.0175
VAL 340.0220
SER 350.0174
ALA 360.0164
ALA 370.0173
ALA 380.0075
VAL 390.0178
ALA 400.0284
ALA 410.0094
GLY 420.0117
PRO 430.0174
ALA 440.0163
ALA 450.0088
ALA 460.0121
VAL 470.0167
GLU 480.0143
ALA 490.0088
ALA 500.0149
GLU 510.0132
GLU 520.0119
GLN 530.0110
THR 540.0117
GLU 550.0107
PHE 560.0040
ASP 570.0036
VAL 580.0025
VAL 590.0030
LEU 600.0043
ALA 610.0051
SER 620.0039
PHE 630.0024
GLY 640.0032
GLU 650.0037
ASN 660.0026
LYS 670.0023
VAL 680.0032
ALA 690.0025
VAL 700.0024
ILE 710.0023
LYS 720.0020
ALA 730.0021
VAL 740.0042
ARG 750.0047
GLY 760.0027
ALA 770.0061
THR 780.0079
GLY 790.0074
LEU 800.0087
GLY 810.0129
LEU 820.0106
LYS 830.0130
GLU 840.0125
ALA 850.0074
LYS 860.0051
ASP 870.0061
LEU 880.0059
VAL 890.0029
GLU 900.0020
SER 910.0045
ALA 920.0042
PRO 930.0042
ALA 940.0040
VAL 950.0037
LEU 960.0047
LYS 970.0039
GLU 980.0045
GLY 990.0054
VAL 1000.0031
ASN 1010.0040
LYS 1020.0040
ASP 1030.0031
GLU 1040.0019
ALA 1050.0018
GLU 1060.0037
THR 1070.0044
LEU 1080.0039
LYS 1090.0037
LYS 1100.0054
SER 1110.0048
LEU 1120.0037
GLU 1130.0035
GLU 1140.0040
ALA 1150.0038
GLY 1160.0034
ALA 1170.0032
SER 1180.0030
VAL 1190.0029
GLU 1200.0029
ILE 1210.0018
LYS 1220.0034
GLU 1230.0059
ALA 1240.0083
ALA 1250.0093
ALA 1260.0130
LYS 1270.0119
ALA 1280.0099
TYR 1290.0098
LYS 1300.0076
ILE 1310.0085
ILE 1320.0059
SER 1330.0045
LEU 1340.0025
LYS 1350.0029
TYR 1360.0055
THR 1370.0046
ARG 1380.0043
LYS 1390.0042
VAL 1400.0037
CYS 1410.0045
ILE 1420.0060
GLY 1430.0074
PRO 1440.0081
GLY 1450.0106
PRO 1460.0135
GLY 1470.0153
LYS 1480.0098
ALA 1490.0049
TYR 1500.0077
LYS 1510.0050
ILE 1520.0040
ILE 1530.0031
SER 1540.0027
LEU 1550.0028
LYS 1560.0020
TYR 1570.0019
THR 1580.0024
ARG 1590.0033
LYS 1600.0042
VAL 1610.0051
CYS 1620.0023
GLY 1630.0016
PRO 1640.0053
GLY 1650.0076
PRO 1660.0171
GLY 1670.0142
GLY 1680.0116
LYS 1690.0047
ALA 1700.0023
TYR 1710.0015
LYS 1720.0015
ILE 1730.0022
ILE 1740.0030
SER 1750.0039
LEU 1760.0029
LYS 1770.0026
TYR 1780.0024
THR 1790.0025
ARG 1800.0037
LYS 1810.0051
VAL 1820.0045
GLY 1830.0046
PRO 1840.0044
GLY 1850.0040
PRO 1860.0056
GLY 1870.0041
ILE 1880.0033
ILE 1890.0034
SER 1900.0041
LEU 1910.0042
LYS 1920.0028
TYR 1930.0019
THR 1940.0022
ARG 1950.0036
LYS 1960.0057
VAL 1970.0067
CYS 1980.0083
ILE 1990.0088
GLN 2000.0106
LEU 2010.0063
GLY 2020.0057
GLY 2030.0033
PRO 2040.0010
GLY 2050.0032
PRO 2060.0015
GLY 2070.0013
ASN 2080.0008
ILE 2090.0011
LYS 2100.0014
THR 2110.0017
ALA 2120.0017
PHE 2130.0020
HIS 2140.0024
CYS 2150.0027
TYR 2160.0039
ALA 2170.0031
ALA 2180.0026
TYR 2190.0035
MET 2200.0034
THR 2210.0041
SER 2220.0033
ILE 2230.0033
LYS 2240.0030
ALA 2250.0033
CYS 2260.0132
ASP 2270.0164
LEU 2280.0176
LYS 2290.0163
LYS 2300.0193
PRO 2310.0236
LEU 2320.0273
MET 2330.0228
GLU 2340.0256
SER 2350.0346
GLY 2360.0350
TRP 2370.0287
SER 2380.0420
ASP 2390.0383
THR 2400.0549
ALA 2410.0509
HIS 2420.0408
GLY 2430.0230
LYS 2440.0306
LYS 2450.0738
SER 2460.0400
LEU 2470.0393
PRO 2480.0188
SER 2490.0428
SER 2500.0465
SER 2510.0291
SER 2520.0304
TYR 2530.0272
SER 2540.0317
TYR 2550.0269
ARG 2560.0177
ARG 2570.0247
LYS 2580.0252
LEU 2590.0338
THR 2600.0371
ASN 2610.0378
PRO 2620.0491
ALA 2630.0260
ASN 2640.0522
LYS 2650.0423
GLU 2660.0070
GLU 2670.0246
SER 2680.0372
ILE 2690.0529
LYS 2700.0682
LYS 2710.0394
GLN 2720.0151
LYS 2730.0312
TYR 2740.0434
SER 2750.0708
TYR 2760.0566
PRO 2770.0624
TRP 2780.0409
GLN 2790.0258
THR 2800.0174
SER 2810.0434
LYS 2820.0348
CYS 2830.0157
PHE 2840.0346
ASP 2880.0043
TYR 2890.0023
GLN 2900.0034
TYR 2910.0056
CYS 2970.0016
ASN 2980.0008
PRO 2990.0009
GLY 3000.0008
LYS 3010.0009
LYS 3020.0006
ASN 3030.0011
THR 3040.0021
ILE 3050.0011
SER 3060.0020
GLY 3070.0026
TYR 3080.0014
LYS 3090.0006
ARG 3100.0020
MET 3110.0022
MET 3120.0017
ALA 3130.0034
THR 3140.0034
LYS 3150.0019
ASP 3160.0028
SER 3170.0025
PHE 3180.0016
GLN 3190.0014
SER 3200.0013
PHE 3210.0025
ASN 3220.0028
LEU 3230.0021
THR 3240.0027
GLU 3250.0044
PRO 3260.0038
HIS 3270.0062
ILE 3280.0057
THR 3290.0047
THR 3300.0060
ASN 3310.0049
LYS 3320.0026
LEU 3330.0017
GLU 3340.0024
TRP 3350.0017
ILE 3360.0035
ASP 3370.0018
PRO 3380.0017
ASP 3390.0035
GLY 3400.0037
ASN 3410.0053
THR 3420.0058
ARG 3430.0039
GLY 3440.0054
GLY 3450.0040
GLY 3460.0066
GLY 10.0078
SER 20.0074
HIS 30.0057
SER 40.0049
MET 50.0034
ARG 60.0036
TYR 70.0036
PHE 80.0043
PHE 90.0044
THR 100.0051
SER 110.0052
VAL 120.0038
SER 130.0047
ARG 140.0049
PRO 150.0064
GLY 160.0101
ARG 170.0088
GLY 180.0081
GLU 190.0075
PRO 200.0056
ARG 210.0049
PHE 220.0048
ILE 230.0043
ALA 240.0043
VAL 250.0039
GLY 260.0027
TYR 270.0027
VAL 280.0028
ASP 290.0027
ASP 300.0027
THR 310.0028
GLN 320.0027
PHE 330.0024
VAL 340.0025
ARG 350.0029
PHE 360.0043
ASP 370.0044
SER 380.0051
ASP 390.0049
ALA 400.0044
ALA 410.0050
SER 420.0046
GLN 430.0051
ARG 440.0044
MET 450.0039
GLU 460.0031
PRO 470.0028
ARG 480.0027
ALA 490.0025
PRO 500.0023
TRP 510.0019
ILE 520.0018
GLU 530.0019
GLN 540.0012
GLU 550.0008
GLY 560.0012
PRO 570.0021
GLU 580.0023
TYR 590.0023
TRP 600.0026
ASP 610.0041
GLY 620.0044
GLU 630.0042
THR 640.0046
ARG 650.0056
LYS 660.0055
VAL 670.0052
LYS 680.0057
ALA 690.0063
HIS 700.0062
SER 710.0059
GLN 720.0070
THR 730.0074
HIS 740.0061
ARG 750.0061
VAL 760.0069
ASP 770.0063
LEU 780.0055
GLY 790.0061
THR 800.0063
LEU 810.0050
ARG 820.0049
GLY 830.0057
TYR 840.0047
TYR 850.0036
ASN 860.0067
GLN 870.0061
SER 880.0079
GLU 890.0078
ALA 900.0075
GLY 910.0044
SER 920.0035
HIS 930.0032
THR 940.0035
VAL 950.0047
GLN 960.0045
ARG 970.0040
MET 980.0038
TYR 990.0034
GLY 1000.0032
CYS 1010.0044
ASP 1020.0063
VAL 1030.0072
GLY 1040.0091
SER 1050.0097
ASP 1060.0103
TRP 1070.0077
ARG 1080.0087
PHE 1090.0080
LEU 1100.0094
ARG 1110.0070
GLY 1120.0049
TYR 1130.0039
HIS 1140.0028
GLN 1150.0043
TYR 1160.0047
ALA 1170.0040
TYR 1180.0038
ASP 1190.0029
GLY 1200.0027
LYS 1210.0034
ASP 1220.0036
TYR 1230.0039
ILE 1240.0039
ALA 1250.0037
LEU 1260.0039
LYS 1270.0073
GLU 1280.0093
ASP 1290.0099
LEU 1300.0067
ARG 1310.0079
SER 1320.0060
TRP 1330.0038
THR 1340.0058
ALA 1350.0053
ALA 1360.0046
ASP 1370.0047
MET 1380.0052
ALA 1390.0050
ALA 1400.0048
GLN 1410.0055
THR 1420.0046
THR 1430.0036
LYS 1440.0033
HIS 1450.0024
LYS 1460.0016
TRP 1470.0016
GLU 1480.0036
ALA 1490.0043
ALA 1500.0055
HIS 1510.0085
VAL 1520.0054
ALA 1530.0054
GLU 1540.0090
GLN 1550.0083
LEU 1560.0040
ARG 1570.0063
ALA 1580.0073
TYR 1590.0043
LEU 1600.0038
GLU 1610.0067
GLY 1620.0063
THR 1630.0042
CYS 1640.0025
VAL 1650.0046
GLU 1660.0039
TRP 1670.0026
LEU 1680.0034
ARG 1690.0040
ARG 1700.0027
TYR 1710.0023
LEU 1720.0031
GLU 1730.0027
ASN 1740.0019
GLY 1750.0027
LYS 1760.0033
GLU 1770.0033
THR 1780.0028
LEU 1790.0023
GLN 1800.0024
ARG 1810.0023
THR 1820.0030
ASP 1830.0035
ALA 1840.0042
PRO 1850.0048
LYS 1860.0056
THR 1870.0052
HIS 1880.0046
MET 1890.0043
THR 1900.0040
HIS 1910.0043
HIS 1920.0048
ALA 1930.0047
VAL 1940.0049
SER 1950.0058
ASP 1960.0072
HIS 1970.0062
GLU 1980.0045
ALA 1990.0036
THR 2000.0036
LEU 2010.0037
ARG 2020.0041
CYS 2030.0045
TRP 2040.0048
ALA 2050.0055
LEU 2060.0044
SER 2070.0038
PHE 2080.0038
TYR 2090.0035
PRO 2100.0035
ALA 2110.0053
GLU 2120.0057
ILE 2130.0055
THR 2140.0058
LEU 2150.0055
THR 2160.0056
TRP 2170.0045
GLN 2180.0047
ARG 2190.0043
ASP 2200.0056
GLY 2210.0063
GLU 2220.0053
ASP 2230.0046
GLN 2240.0031
THR 2250.0033
GLN 2260.0021
ASP 2270.0019
THR 2280.0027
GLU 2290.0033
LEU 2300.0042
VAL 2310.0038
GLU 2320.0040
THR 2330.0041
ARG 2340.0042
PRO 2350.0045
ALA 2360.0036
GLY 2370.0044
ASP 2380.0039
GLY 2390.0045
THR 2400.0037
PHE 2410.0040
GLN 2420.0040
LYS 2430.0043
TRP 2440.0043
ALA 2450.0046
ALA 2460.0041
VAL 2470.0030
VAL 2480.0025
VAL 2490.0027
PRO 2500.0037
SER 2510.0041
GLY 2520.0041
GLN 2530.0039
GLU 2540.0032
GLN 2550.0040
ARG 2560.0042
TYR 2570.0039
THR 2580.0049
CYS 2590.0055
HIS 2600.0067
VAL 2610.0063
GLN 2620.0062
HIS 2630.0058
GLU 2640.0055
GLY 2650.0051
LEU 2660.0065
PRO 2670.0070
LYS 2680.0073
PRO 2690.0072
LEU 2700.0063
THR 2710.0069
LEU 2720.0063
ARG 2730.0054
TRP 2740.0045
GLU 2750.0046
PRO 2760.0077
GLN 2780.0030
ARG 2790.0035
THR 2800.0037
PRO 2810.0042
LYS 2820.0045
ILE 2830.0063
GLN 2840.0055
VAL 2850.0056
TYR 2860.0048
SER 2870.0046
ARG 2880.0041
HIS 2890.0029
PRO 2900.0029
ALA 2910.0041
GLU 2920.0044
ASN 2930.0062
GLY 2940.0064
LYS 2950.0046
SER 2960.0039
ASN 2970.0035
PHE 2980.0042
LEU 2990.0048
ASN 3000.0050
CYS 3010.0057
TYR 3020.0057
VAL 3030.0045
SER 3040.0044
GLY 3050.0041
PHE 3060.0035
HIS 3070.0031
PRO 3080.0042
SER 3090.0044
ASP 3100.0045
ILE 3110.0045
GLU 3120.0047
VAL 3130.0081
ASP 3140.0076
LEU 3150.0068
LEU 3160.0074
LYS 3170.0072
ASN 3180.0102
GLY 3190.0109
GLU 3200.0098
ARG 3210.0087
ILE 3220.0068
GLU 3230.0051
LYS 3240.0049
VAL 3250.0047
GLU 3260.0045
HIS 3270.0045
SER 3280.0027
ASP 3290.0026
LEU 3300.0026
SER 3310.0033
PHE 3320.0037
SER 3330.0026
LYS 3340.0028
ASP 3350.0026
TRP 3360.0024
SER 3370.0022
PHE 3380.0036
TYR 3390.0039
LEU 3400.0040
LEU 3410.0043
TYR 3420.0044
TYR 3430.0055
THR 3440.0050
GLU 3450.0041
PHE 3460.0047
THR 3470.0049
PRO 3480.0059
THR 3490.0080
GLU 3500.0108
LYS 3510.0120
ASP 3520.0097
GLU 3530.0080
TYR 3540.0073
ALA 3550.0079
CYS 3560.0079
ARG 3570.0088
VAL 3580.0061
ASN 3590.0060
HIS 3600.0059
VAL 3610.0059
THR 3620.0059
LEU 3630.0068
SER 3640.0065
GLN 3650.0060
PRO 3660.0061
LYS 3670.0069
ILE 3680.0086
VAL 3690.0082
LYS 3700.0078
TRP 3710.0070
ASP 3720.0071
ARG 3730.0053
ASP 3740.0045
MET 3750.0050
SER 10.0007
GLN 20.0010
PHE 30.0011
ARG 40.0011
VAL 50.0012
SER 60.0020
PRO 70.0024
LEU 80.0024
ASP 90.0032
ARG 100.0034
THR 110.0031
TRP 120.0034
ASN 130.0037
LEU 140.0039
GLY 150.0041
GLU 160.0042
THR 170.0034
VAL 180.0030
GLU 190.0026
LEU 200.0022
LYS 210.0018
CYS 220.0014
GLN 230.0014
VAL 240.0013
LEU 250.0011
LEU 260.0015
SER 270.0021
ASN 280.0023
PRO 290.0018
THR 300.0019
SER 310.0027
GLY 320.0023
CYS 330.0016
SER 340.0008
TRP 350.0007
LEU 360.0011
PHE 370.0013
GLN 380.0016
PRO 390.0020
ARG 400.0023
GLY 410.0021
ALA 420.0022
ALA 430.0020
ALA 440.0018
SER 450.0015
PRO 460.0014
THR 470.0013
PHE 480.0007
LEU 490.0007
LEU 500.0007
TYR 510.0016
LEU 520.0022
SER 530.0033
GLN 540.0044
ASN 550.0044
LYS 560.0039
PRO 570.0027
LYS 580.0025
ALA 590.0019
ALA 600.0022
GLU 610.0039
GLY 620.0036
LEU 630.0023
ASP 640.0018
THR 650.0007
GLN 660.0015
ARG 670.0022
PHE 680.0016
SER 690.0016
GLY 700.0020
LYS 710.0026
ARG 720.0032
LEU 730.0040
GLY 740.0044
ASP 750.0037
THR 760.0033
PHE 770.0024
VAL 780.0023
LEU 790.0017
THR 800.0021
LEU 810.0029
SER 820.0033
ASP 830.0038
PHE 840.0037
ARG 850.0038
ARG 860.0031
GLU 870.0033
ASN 880.0034
GLU 890.0029
GLY 900.0028
TYR 910.0021
TYR 920.0017
PHE 930.0014
CYS 940.0011
SER 950.0007
ALA 960.0013
LEU 970.0015
SER 980.0019
ASN 990.0021
SER 1000.0017
ILE 1010.0012
MET 1020.0009
TYR 1030.0011
PHE 1040.0011
SER 1050.0014
HIS 1060.0015
PHE 1070.0017
VAL 1080.0020
PRO 1090.0023
VAL 1100.0026
PHE 1110.0033
LEU 1120.0031
PRO 1130.0024
ALA 1140.0021
SER 10.0009
GLN 20.0010
PHE 30.0009
ARG 40.0009
VAL 50.0008
SER 60.0004
PRO 70.0006
LEU 80.0010
ASP 90.0015
ARG 100.0014
THR 110.0016
TRP 120.0018
ASN 130.0024
LEU 140.0028
GLY 150.0032
GLU 160.0025
THR 170.0020
VAL 180.0013
GLU 190.0008
LEU 200.0003
LYS 210.0009
CYS 220.0010
GLN 230.0010
VAL 240.0011
LEU 250.0012
LEU 260.0017
SER 270.0022
ASN 280.0023
PRO 290.0018
THR 300.0018
SER 310.0015
GLY 320.0014
CYS 330.0012
SER 340.0011
TRP 350.0010
LEU 360.0008
PHE 370.0009
GLN 380.0012
PRO 390.0013
ARG 400.0015
GLY 410.0020
ALA 420.0021
ALA 430.0020
ALA 440.0016
SER 450.0013
PRO 460.0012
THR 470.0012
PHE 480.0011
LEU 490.0010
LEU 500.0009
TYR 510.0014
LEU 520.0017
SER 530.0018
GLN 540.0019
ASN 550.0016
LYS 560.0015
PRO 570.0015
LYS 580.0012
ALA 590.0013
ALA 600.0011
GLU 610.0014
GLY 620.0010
LEU 630.0010
ASP 640.0010
THR 650.0012
GLN 660.0017
ARG 670.0015
PHE 680.0012
SER 690.0009
GLY 700.0007
LYS 710.0012
ARG 720.0014
LEU 730.0014
GLY 740.0015
ASP 750.0015
THR 760.0011
PHE 770.0011
VAL 780.0009
LEU 790.0009
THR 800.0008
LEU 810.0014
SER 820.0020
ASP 830.0026
PHE 840.0021
ARG 850.0024
ARG 860.0022
GLU 870.0022
ASN 880.0015
GLU 890.0008
GLY 900.0007
TYR 910.0009
TYR 920.0007
PHE 930.0007
CYS 940.0007
SER 950.0009
ALA 960.0010
LEU 970.0013
SER 980.0019
ASN 990.0024
SER 1000.0021
ILE 1010.0011
MET 1020.0008
TYR 1030.0007
PHE 1040.0008
SER 1050.0011
HIS 1060.0010
PHE 1070.0008
VAL 1080.0004
PRO 1090.0003
VAL 1100.0002
PHE 1110.0006
LEU 1120.0016
PRO 1130.0023
ALA 1140.0022

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elNémo is maintained by Yves-Henri Sanejouand.
It was developed by Karsten Suhre.
Between 2003 and 2014, it was hosted by IGS (Marseille).
Between 2015 and 2025, it was hosted by US2B (Nantes).
Last modification: april 24th, 2026.