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***  MHC1  ***

<R2> analysis for 2607180828532135053

---  normal mode 11  ---

This page gives a visualization of the normalized mean square displacement <R2> of all C-alpha atoms in the protein that are associated to this mode (black bars). The three components of the corresponding eigenvector are shown on the left (colored bars). Here is the raw data for <R2> and for the eigenvector (shift-click on the links for download).

XYZresidue<R2><R2>max = 0.0654
MET 10.0319
SER 20.0294
THR 30.0285
ILE 40.0248
THR 50.0267
LYS 60.0247
ASP 70.0266
GLN 80.0239
ILE 90.0201
LEU 100.0220
GLU 110.0228
GLY 120.0185
VAL 130.0178
ALA 140.0215
ALA 150.0196
LEU 160.0170
SER 170.0189
VAL 180.0202
MET 190.0184
GLU 200.0149
ILE 210.0156
VAL 220.0158
GLU 230.0137
LEU 240.0123
ILE 250.0129
SER 260.0127
ALA 270.0119
MET 280.0118
GLU 290.0117
GLU 300.0130
LYS 310.0136
PHE 320.0133
GLY 330.0126
VAL 340.0118
SER 350.0121
ALA 360.0143
ALA 370.0144
ALA 380.0129
VAL 390.0152
ALA 400.0172
ALA 410.0152
GLY 420.0161
PRO 430.0149
ALA 440.0132
ALA 450.0120
ALA 460.0112
VAL 470.0093
GLU 480.0084
ALA 490.0085
ALA 500.0070
GLU 510.0058
GLU 520.0056
GLN 530.0049
THR 540.0047
GLU 550.0041
PHE 560.0036
ASP 570.0030
VAL 580.0028
VAL 590.0023
LEU 600.0022
ALA 610.0024
SER 620.0026
PHE 630.0027
GLY 640.0033
GLU 650.0037
ASN 660.0034
LYS 670.0028
VAL 680.0027
ALA 690.0029
VAL 700.0026
ILE 710.0020
LYS 720.0022
ALA 730.0025
VAL 740.0020
ARG 750.0016
GLY 760.0021
ALA 770.0023
THR 780.0019
GLY 790.0016
LEU 800.0011
GLY 810.0009
LEU 820.0012
LYS 830.0012
GLU 840.0009
ALA 850.0012
LYS 860.0015
ASP 870.0012
LEU 880.0011
VAL 890.0016
GLU 900.0017
SER 910.0013
ALA 920.0016
PRO 930.0017
ALA 940.0015
VAL 950.0018
LEU 960.0019
LYS 970.0023
GLU 980.0027
GLY 990.0034
VAL 1000.0035
ASN 1010.0042
LYS 1020.0044
ASP 1030.0045
GLU 1040.0038
ALA 1050.0036
GLU 1060.0041
THR 1070.0039
LEU 1080.0033
LYS 1090.0035
LYS 1100.0040
SER 1110.0035
LEU 1120.0031
GLU 1130.0037
GLU 1140.0039
ALA 1150.0034
GLY 1160.0036
ALA 1170.0031
SER 1180.0032
VAL 1190.0030
GLU 1200.0031
ILE 1210.0034
LYS 1220.0032
GLU 1230.0037
ALA 1240.0034
ALA 1250.0033
ALA 1260.0037
LYS 1270.0036
ALA 1280.0038
TYR 1290.0042
LYS 1300.0043
ILE 1310.0046
ILE 1320.0047
SER 1330.0051
LEU 1340.0053
LYS 1350.0057
TYR 1360.0058
THR 1370.0059
ARG 1380.0059
LYS 1390.0061
VAL 1400.0063
CYS 1410.0067
ILE 1420.0072
GLY 1430.0077
PRO 1440.0085
GLY 1450.0093
PRO 1460.0104
GLY 1470.0108
LYS 1480.0102
ALA 1490.0094
TYR 1500.0083
LYS 1510.0078
ILE 1520.0072
ILE 1530.0069
SER 1540.0064
LEU 1550.0063
LYS 1560.0060
TYR 1570.0059
THR 1580.0057
ARG 1590.0056
LYS 1600.0055
VAL 1610.0056
CYS 1620.0055
GLY 1630.0055
PRO 1640.0056
GLY 1650.0057
PRO 1660.0059
GLY 1670.0061
GLY 1680.0059
LYS 1690.0060
ALA 1700.0058
TYR 1710.0060
LYS 1720.0059
ILE 1730.0059
ILE 1740.0060
SER 1750.0060
LEU 1760.0063
LYS 1770.0062
TYR 1780.0066
THR 1790.0067
ARG 1800.0072
LYS 1810.0073
VAL 1820.0080
GLY 1830.0083
PRO 1840.0088
GLY 1850.0084
PRO 1860.0079
GLY 1870.0074
ILE 1880.0068
ILE 1890.0066
SER 1900.0062
LEU 1910.0061
LYS 1920.0059
TYR 1930.0057
THR 1940.0055
ARG 1950.0054
LYS 1960.0053
VAL 1970.0049
CYS 1980.0046
ILE 1990.0042
GLN 2000.0039
LEU 2010.0034
GLY 2020.0028
GLY 2030.0025
PRO 2040.0022
GLY 2050.0020
PRO 2060.0021
GLY 2070.0025
ASN 2080.0030
ILE 2090.0033
LYS 2100.0034
THR 2110.0036
ALA 2120.0040
PHE 2130.0042
HIS 2140.0043
CYS 2150.0046
TYR 2160.0049
ALA 2170.0052
ALA 2180.0052
TYR 2190.0055
MET 2200.0060
THR 2210.0062
SER 2220.0064
ILE 2230.0070
LYS 2240.0075
ALA 2250.0081
CYS 2260.0089
ASP 2270.0083
LEU 2280.0042
LYS 2290.0043
LYS 2300.0034
PRO 2310.0070
LEU 2320.0119
MET 2330.0166
GLU 2340.0225
SER 2350.0250
GLY 2360.0322
TRP 2370.0303
SER 2380.0323
ASP 2390.0312
THR 2400.0376
ALA 2410.0356
HIS 2420.0427
GLY 2430.0422
LYS 2440.0473
LYS 2450.0474
SER 2460.0441
LEU 2470.0381
PRO 2480.0382
SER 2490.0329
SER 2500.0272
SER 2510.0229
SER 2520.0221
TYR 2530.0248
SER 2540.0292
TYR 2550.0302
ARG 2560.0367
ARG 2570.0351
LYS 2580.0416
LEU 2590.0400
THR 2600.0451
ASN 2610.0459
PRO 2620.0472
ALA 2630.0555
ASN 2640.0581
LYS 2650.0600
GLU 2660.0571
GLU 2670.0546
SER 2680.0521
ILE 2690.0463
LYS 2700.0472
LYS 2710.0404
GLN 2720.0357
LYS 2730.0312
TYR 2740.0262
SER 2750.0238
TYR 2760.0232
PRO 2770.0265
TRP 2780.0286
GLN 2790.0248
THR 2800.0252
SER 2810.0329
LYS 2820.0384
CYS 2830.0482
PHE 2840.0654
ASP 2880.0549
TYR 2890.0384
GLN 2900.0235
TYR 2910.0029
CYS 2970.0078
ASN 2980.0080
PRO 2990.0084
GLY 3000.0089
LYS 3010.0089
LYS 3020.0091
ASN 3030.0086
THR 3040.0080
ILE 3050.0079
SER 3060.0076
GLY 3070.0080
TYR 3080.0075
LYS 3090.0074
ARG 3100.0081
MET 3110.0080
MET 3120.0076
ALA 3130.0080
THR 3140.0084
LYS 3150.0080
ASP 3160.0084
SER 3170.0089
PHE 3180.0086
GLN 3190.0087
SER 3200.0082
PHE 3210.0082
ASN 3220.0078
LEU 3230.0079
THR 3240.0080
GLU 3250.0080
PRO 3260.0080
HIS 3270.0083
ILE 3280.0080
THR 3290.0085
THR 3300.0084
ASN 3310.0087
LYS 3320.0089
LEU 3330.0085
GLU 3340.0089
TRP 3350.0087
ILE 3360.0089
ASP 3370.0090
PRO 3380.0087
ASP 3390.0091
GLY 3400.0097
ASN 3410.0098
THR 3420.0101
ARG 3430.0107
GLY 3440.0111
GLY 3450.0117
GLY 3460.0122
GLY 10.0020
SER 20.0017
HIS 30.0012
SER 40.0010
MET 50.0009
ARG 60.0011
TYR 70.0013
PHE 80.0013
PHE 90.0018
THR 100.0019
SER 110.0023
VAL 120.0023
SER 130.0028
ARG 140.0030
PRO 150.0034
GLY 160.0038
ARG 170.0037
GLY 180.0038
GLU 190.0036
PRO 200.0031
ARG 210.0027
PHE 220.0025
ILE 230.0021
ALA 240.0019
VAL 250.0015
GLY 260.0013
TYR 270.0009
VAL 280.0009
ASP 290.0010
ASP 300.0012
THR 310.0013
GLN 320.0013
PHE 330.0016
VAL 340.0018
ARG 350.0020
PHE 360.0024
ASP 370.0026
SER 380.0031
ASP 390.0032
ALA 400.0033
ALA 410.0039
SER 420.0038
GLN 430.0036
ARG 440.0033
MET 450.0027
GLU 460.0027
PRO 470.0024
ARG 480.0022
ALA 490.0021
PRO 500.0025
TRP 510.0021
ILE 520.0021
GLU 530.0027
GLN 540.0027
GLU 550.0025
GLY 560.0030
PRO 570.0034
GLU 580.0033
TYR 590.0027
TRP 600.0030
ASP 610.0034
GLY 620.0031
GLU 630.0027
THR 640.0031
ARG 650.0034
LYS 660.0030
VAL 670.0028
LYS 680.0033
ALA 690.0034
HIS 700.0029
SER 710.0030
GLN 720.0036
THR 730.0035
HIS 740.0030
ARG 750.0034
VAL 760.0038
ASP 770.0034
LEU 780.0033
GLY 790.0038
THR 800.0040
LEU 810.0036
ARG 820.0037
GLY 830.0042
TYR 840.0041
TYR 850.0039
ASN 860.0042
GLN 870.0037
SER 880.0038
GLU 890.0037
ALA 900.0033
GLY 910.0028
SER 920.0025
HIS 930.0025
THR 940.0022
VAL 950.0023
GLN 960.0019
ARG 970.0020
MET 980.0017
TYR 990.0018
GLY 1000.0015
CYS 1010.0015
ASP 1020.0015
VAL 1030.0016
GLY 1040.0019
SER 1050.0019
ASP 1060.0018
TRP 1070.0014
ARG 1080.0017
PHE 1090.0019
LEU 1100.0022
ARG 1110.0022
GLY 1120.0021
TYR 1130.0022
HIS 1140.0023
GLN 1150.0023
TYR 1160.0024
ALA 1170.0023
TYR 1180.0025
ASP 1190.0022
GLY 1200.0019
LYS 1210.0023
ASP 1220.0026
TYR 1230.0030
ILE 1240.0031
ALA 1250.0029
LEU 1260.0031
LYS 1270.0033
GLU 1280.0031
ASP 1290.0035
LEU 1300.0032
ARG 1310.0038
SER 1320.0039
TRP 1330.0037
THR 1340.0037
ALA 1350.0038
ALA 1360.0038
ASP 1370.0039
MET 1380.0043
ALA 1390.0041
ALA 1400.0038
GLN 1410.0044
THR 1420.0045
THR 1430.0041
LYS 1440.0042
HIS 1450.0047
LYS 1460.0045
TRP 1470.0041
GLU 1480.0045
ALA 1490.0049
ALA 1500.0045
HIS 1510.0043
VAL 1520.0037
ALA 1530.0036
GLU 1540.0037
GLN 1550.0033
LEU 1560.0029
ARG 1570.0029
ALA 1580.0028
TYR 1590.0024
LEU 1600.0021
GLU 1610.0022
GLY 1620.0020
THR 1630.0019
CYS 1640.0015
VAL 1650.0013
GLU 1660.0013
TRP 1670.0012
LEU 1680.0009
ARG 1690.0008
ARG 1700.0011
TYR 1710.0011
LEU 1720.0011
GLU 1730.0012
ASN 1740.0016
GLY 1750.0017
LYS 1760.0017
GLU 1770.0023
THR 1780.0021
LEU 1790.0016
GLN 1800.0018
ARG 1810.0023
THR 1820.0025
ASP 1830.0029
ALA 1840.0033
PRO 1850.0034
LYS 1860.0039
THR 1870.0042
HIS 1880.0046
MET 1890.0047
THR 1900.0047
HIS 1910.0050
HIS 1920.0048
ALA 1930.0051
VAL 1940.0047
SER 1950.0051
ASP 1960.0057
HIS 1970.0058
GLU 1980.0053
ALA 1990.0051
THR 2000.0046
LEU 2010.0047
ARG 2020.0042
CYS 2030.0041
TRP 2040.0038
ALA 2050.0035
LEU 2060.0033
SER 2070.0032
PHE 2080.0028
TYR 2090.0023
PRO 2100.0020
ALA 2110.0019
GLU 2120.0021
ILE 2130.0027
THR 2140.0031
LEU 2150.0035
THR 2160.0039
TRP 2170.0044
GLN 2180.0049
ARG 2190.0055
ASP 2200.0060
GLY 2210.0056
GLU 2220.0053
ASP 2230.0047
GLN 2240.0046
THR 2250.0041
GLN 2260.0040
ASP 2270.0042
THR 2280.0038
GLU 2290.0033
LEU 2300.0029
VAL 2310.0025
GLU 2320.0020
THR 2330.0021
ARG 2340.0020
PRO 2350.0021
ALA 2360.0026
GLY 2370.0026
ASP 2380.0028
GLY 2390.0023
THR 2400.0025
PHE 2410.0024
GLN 2420.0027
LYS 2430.0028
TRP 2440.0033
ALA 2450.0035
ALA 2460.0039
VAL 2470.0043
VAL 2480.0046
VAL 2490.0052
PRO 2500.0056
SER 2510.0060
GLY 2520.0065
GLN 2530.0062
GLU 2540.0058
GLN 2550.0062
ARG 2560.0060
TYR 2570.0054
THR 2580.0052
CYS 2590.0046
HIS 2600.0043
VAL 2610.0038
GLN 2620.0035
HIS 2630.0031
GLU 2640.0028
GLY 2650.0030
LEU 2660.0036
PRO 2670.0038
LYS 2680.0042
PRO 2690.0042
LEU 2700.0044
THR 2710.0049
LEU 2720.0050
ARG 2730.0055
TRP 2740.0056
GLU 2750.0062
PRO 2760.0063
GLN 2780.0014
ARG 2790.0011
THR 2800.0010
PRO 2810.0010
LYS 2820.0015
ILE 2830.0018
GLN 2840.0023
VAL 2850.0027
TYR 2860.0031
SER 2870.0034
ARG 2880.0033
HIS 2890.0039
PRO 2900.0043
ALA 2910.0045
GLU 2920.0051
ASN 2930.0054
GLY 2940.0056
LYS 2950.0052
SER 2960.0048
ASN 2970.0042
PHE 2980.0036
LEU 2990.0034
ASN 3000.0028
CYS 3010.0023
TYR 3020.0018
VAL 3030.0014
SER 3040.0011
GLY 3050.0011
PHE 3060.0009
HIS 3070.0011
PRO 3080.0013
SER 3090.0013
ASP 3100.0015
ILE 3110.0014
GLU 3120.0019
VAL 3130.0020
ASP 3140.0026
LEU 3150.0030
LEU 3160.0034
LYS 3170.0040
ASN 3180.0041
GLY 3190.0036
GLU 3200.0038
ARG 3210.0035
ILE 3220.0037
GLU 3230.0039
LYS 3240.0038
VAL 3250.0032
GLU 3260.0029
HIS 3270.0023
SER 3280.0019
ASP 3290.0017
LEU 3300.0014
SER 3310.0010
PHE 3320.0009
SER 3330.0010
LYS 3340.0015
ASP 3350.0016
TRP 3360.0014
SER 3370.0010
PHE 3380.0008
TYR 3390.0010
LEU 3400.0014
LEU 3410.0018
TYR 3420.0023
TYR 3430.0028
THR 3440.0034
GLU 3450.0039
PHE 3460.0043
THR 3470.0048
PRO 3480.0047
THR 3490.0052
GLU 3500.0054
LYS 3510.0052
ASP 3520.0048
GLU 3530.0042
TYR 3540.0037
ALA 3550.0031
CYS 3560.0026
ARG 3570.0023
VAL 3580.0017
ASN 3590.0014
HIS 3600.0011
VAL 3610.0011
THR 3620.0009
LEU 3630.0009
SER 3640.0009
GLN 3650.0012
PRO 3660.0016
LYS 3670.0017
ILE 3680.0023
VAL 3690.0026
LYS 3700.0032
TRP 3710.0034
ASP 3720.0038
ARG 3730.0041
ASP 3740.0045
MET 3750.0040
SER 10.0026
GLN 20.0024
PHE 30.0028
ARG 40.0030
VAL 50.0036
SER 60.0040
PRO 70.0045
LEU 80.0046
ASP 90.0050
ARG 100.0055
THR 110.0060
TRP 120.0063
ASN 130.0070
LEU 140.0074
GLY 150.0073
GLU 160.0067
THR 170.0061
VAL 180.0057
GLU 190.0051
LEU 200.0046
LYS 210.0040
CYS 220.0035
GLN 230.0030
VAL 240.0027
LEU 250.0022
LEU 260.0022
SER 270.0019
ASN 280.0024
PRO 290.0028
THR 300.0033
SER 310.0037
GLY 320.0038
CYS 330.0039
SER 340.0044
TRP 350.0046
LEU 360.0049
PHE 370.0053
GLN 380.0054
PRO 390.0059
ARG 400.0060
GLY 410.0062
ALA 420.0060
ALA 430.0057
ALA 440.0058
SER 450.0056
PRO 460.0053
THR 470.0056
PHE 480.0054
LEU 490.0055
LEU 500.0052
TYR 510.0048
LEU 520.0044
SER 530.0041
GLN 540.0040
ASN 550.0046
LYS 560.0051
PRO 570.0051
LYS 580.0055
ALA 590.0058
ALA 600.0061
GLU 610.0067
GLY 620.0071
LEU 630.0067
ASP 640.0069
THR 650.0065
GLN 660.0067
ARG 670.0065
PHE 680.0060
SER 690.0055
GLY 700.0049
LYS 710.0043
ARG 720.0038
LEU 730.0033
GLY 740.0028
ASP 750.0027
THR 760.0031
PHE 770.0037
VAL 780.0042
LEU 790.0048
THR 800.0053
LEU 810.0059
SER 820.0064
ASP 830.0069
PHE 840.0067
ARG 850.0072
ARG 860.0072
GLU 870.0071
ASN 880.0065
GLU 890.0063
GLY 900.0058
TYR 910.0052
TYR 920.0049
PHE 930.0043
CYS 940.0040
SER 950.0038
ALA 960.0035
LEU 970.0034
SER 980.0030
ASN 990.0031
SER 1000.0035
ILE 1010.0032
MET 1020.0034
TYR 1030.0032
PHE 1040.0035
SER 1050.0035
HIS 1060.0037
PHE 1070.0043
VAL 1080.0046
PRO 1090.0052
VAL 1100.0056
PHE 1110.0062
LEU 1120.0068
PRO 1130.0069
ALA 1140.0070
SER 10.0066
GLN 20.0065
PHE 30.0063
ARG 40.0065
VAL 50.0060
SER 60.0059
PRO 70.0058
LEU 80.0061
ASP 90.0063
ARG 100.0057
THR 110.0053
TRP 120.0047
ASN 130.0043
LEU 140.0037
GLY 150.0034
GLU 160.0039
THR 170.0040
VAL 180.0043
GLU 190.0047
LEU 200.0050
LYS 210.0054
CYS 220.0056
GLN 230.0061
VAL 240.0061
LEU 250.0067
LEU 260.0066
SER 270.0070
ASN 280.0066
PRO 290.0062
THR 300.0059
SER 310.0053
GLY 320.0050
CYS 330.0048
SER 340.0044
TRP 350.0043
LEU 360.0041
PHE 370.0041
GLN 380.0043
PRO 390.0043
ARG 400.0049
GLY 410.0050
ALA 420.0052
ALA 430.0048
ALA 440.0044
SER 450.0041
PRO 460.0040
THR 470.0035
PHE 480.0034
LEU 490.0034
LEU 500.0036
TYR 510.0040
LEU 520.0044
SER 530.0048
GLN 540.0051
ASN 550.0046
LYS 560.0041
PRO 570.0039
LYS 580.0034
ALA 590.0030
ALA 600.0027
GLU 610.0022
GLY 620.0019
LEU 630.0024
ASP 640.0023
THR 650.0027
GLN 660.0026
ARG 670.0029
PHE 680.0032
SER 690.0036
GLY 700.0042
LYS 710.0047
ARG 720.0052
LEU 730.0058
GLY 740.0062
ASP 750.0062
THR 760.0059
PHE 770.0052
VAL 780.0049
LEU 790.0044
THR 800.0041
LEU 810.0036
SER 820.0034
ASP 830.0032
PHE 840.0035
ARG 850.0033
ARG 860.0037
GLU 870.0034
ASN 880.0036
GLU 890.0042
GLY 900.0045
TYR 910.0048
TYR 920.0047
PHE 930.0050
CYS 940.0050
SER 950.0050
ALA 960.0052
LEU 970.0052
SER 980.0057
ASN 990.0057
SER 1000.0052
ILE 1010.0055
MET 1020.0052
TYR 1030.0056
PHE 1040.0055
SER 1050.0057
HIS 1060.0059
PHE 1070.0055
VAL 1080.0054
PRO 1090.0053
VAL 1100.0049
PHE 1110.0049
LEU 1120.0048
PRO 1130.0053
ALA 1140.0056

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elNémo is maintained by Yves-Henri Sanejouand.
It was developed by Karsten Suhre.
Between 2003 and 2014, it was hosted by IGS (Marseille).
Between 2015 and 2025, it was hosted by US2B (Nantes).
Last modification: april 24th, 2026.