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***  MHC1  ***

<R2> analysis for 2607180828532135053

---  normal mode 12  ---

This page gives a visualization of the normalized mean square displacement <R2> of all C-alpha atoms in the protein that are associated to this mode (black bars). The three components of the corresponding eigenvector are shown on the left (colored bars). Here is the raw data for <R2> and for the eigenvector (shift-click on the links for download).

XYZresidue<R2><R2>max = 0.0824
MET 10.0824
SER 20.0674
THR 30.0692
ILE 40.0521
THR 50.0639
LYS 60.0621
ASP 70.0676
GLN 80.0497
ILE 90.0392
LEU 100.0550
GLU 110.0556
GLY 120.0377
VAL 130.0452
ALA 140.0641
ALA 150.0596
LEU 160.0578
SER 170.0743
VAL 180.0778
MET 190.0752
GLU 200.0581
ILE 210.0514
VAL 220.0551
GLU 230.0494
LEU 240.0316
ILE 250.0303
SER 260.0346
ALA 270.0290
MET 280.0132
GLU 290.0159
GLU 300.0299
LYS 310.0293
PHE 320.0236
GLY 330.0211
VAL 340.0133
SER 350.0174
ALA 360.0325
ALA 370.0370
ALA 380.0291
VAL 390.0420
ALA 400.0545
ALA 410.0496
GLY 420.0555
PRO 430.0519
ALA 440.0485
ALA 450.0374
ALA 460.0305
VAL 470.0254
GLU 480.0195
ALA 490.0139
ALA 500.0055
GLU 510.0044
GLU 520.0045
GLN 530.0041
THR 540.0046
GLU 550.0041
PHE 560.0039
ASP 570.0035
VAL 580.0036
VAL 590.0032
LEU 600.0031
ALA 610.0030
SER 620.0030
PHE 630.0030
GLY 640.0033
GLU 650.0033
ASN 660.0034
LYS 670.0030
VAL 680.0032
ALA 690.0036
VAL 700.0034
ILE 710.0032
LYS 720.0037
ALA 730.0039
VAL 740.0036
ARG 750.0037
GLY 760.0042
ALA 770.0041
THR 780.0038
GLY 790.0040
LEU 800.0035
GLY 810.0033
LEU 820.0031
LYS 830.0026
GLU 840.0027
ALA 850.0029
LYS 860.0025
ASP 870.0021
LEU 880.0024
VAL 890.0026
GLU 900.0021
SER 910.0019
ALA 920.0023
PRO 930.0024
ALA 940.0025
VAL 950.0028
LEU 960.0032
LYS 970.0035
GLU 980.0035
GLY 990.0039
VAL 1000.0042
ASN 1010.0046
LYS 1020.0047
ASP 1030.0051
GLU 1040.0048
ALA 1050.0044
GLU 1060.0047
THR 1070.0049
LEU 1080.0044
LYS 1090.0043
LYS 1100.0047
SER 1110.0045
LEU 1120.0041
GLU 1130.0043
GLU 1140.0045
ALA 1150.0041
GLY 1160.0039
ALA 1170.0036
SER 1180.0036
VAL 1190.0037
GLU 1200.0036
ILE 1210.0038
LYS 1220.0036
GLU 1230.0037
ALA 1240.0035
ALA 1250.0032
ALA 1260.0036
LYS 1270.0033
ALA 1280.0033
TYR 1290.0034
LYS 1300.0033
ILE 1310.0035
ILE 1320.0032
SER 1330.0033
LEU 1340.0031
LYS 1350.0032
TYR 1360.0031
THR 1370.0030
ARG 1380.0030
LYS 1390.0028
VAL 1400.0029
CYS 1410.0027
ILE 1420.0029
GLY 1430.0027
PRO 1440.0028
GLY 1450.0028
PRO 1460.0026
GLY 1470.0027
LYS 1480.0030
ALA 1490.0030
TYR 1500.0031
LYS 1510.0034
ILE 1520.0033
ILE 1530.0036
SER 1540.0036
LEU 1550.0038
LYS 1560.0038
TYR 1570.0039
THR 1580.0039
ARG 1590.0040
LYS 1600.0041
VAL 1610.0040
CYS 1620.0042
GLY 1630.0040
PRO 1640.0042
GLY 1650.0044
PRO 1660.0045
GLY 1670.0045
GLY 1680.0043
LYS 1690.0044
ALA 1700.0043
TYR 1710.0045
LYS 1720.0043
ILE 1730.0044
ILE 1740.0044
SER 1750.0044
LEU 1760.0044
LYS 1770.0042
TYR 1780.0041
THR 1790.0040
ARG 1800.0039
LYS 1810.0036
VAL 1820.0034
GLY 1830.0030
PRO 1840.0027
GLY 1850.0024
PRO 1860.0025
GLY 1870.0028
ILE 1880.0028
ILE 1890.0031
SER 1900.0032
LEU 1910.0034
LYS 1920.0034
TYR 1930.0034
THR 1940.0035
ARG 1950.0035
LYS 1960.0036
VAL 1970.0034
CYS 1980.0034
ILE 1990.0031
GLN 2000.0030
LEU 2010.0027
GLY 2020.0025
GLY 2030.0024
PRO 2040.0022
GLY 2050.0018
PRO 2060.0015
GLY 2070.0014
ASN 2080.0017
ILE 2090.0018
LYS 2100.0014
THR 2110.0016
ALA 2120.0020
PHE 2130.0018
HIS 2140.0016
CYS 2150.0020
TYR 2160.0022
ALA 2170.0019
ALA 2180.0019
TYR 2190.0023
MET 2200.0023
THR 2210.0020
SER 2220.0024
ILE 2230.0028
LYS 2240.0030
ALA 2250.0033
CYS 2260.0040
ASP 2270.0043
LEU 2280.0033
LYS 2290.0042
LYS 2300.0040
PRO 2310.0045
LEU 2320.0062
MET 2330.0067
GLU 2340.0087
SER 2350.0091
GLY 2360.0100
TRP 2370.0095
SER 2380.0093
ASP 2390.0090
THR 2400.0101
ALA 2410.0099
HIS 2420.0112
GLY 2430.0113
LYS 2440.0122
LYS 2450.0124
SER 2460.0117
LEU 2470.0105
PRO 2480.0105
SER 2490.0095
SER 2500.0087
SER 2510.0087
SER 2520.0091
TYR 2530.0092
SER 2540.0103
TYR 2550.0101
ARG 2560.0114
ARG 2570.0110
LYS 2580.0120
LEU 2590.0119
THR 2600.0126
ASN 2610.0130
PRO 2620.0128
ALA 2630.0149
ASN 2640.0152
LYS 2650.0163
GLU 2660.0157
GLU 2670.0158
SER 2680.0154
ILE 2690.0147
LYS 2700.0152
LYS 2710.0137
GLN 2720.0134
LYS 2730.0127
TYR 2740.0123
SER 2750.0121
TYR 2760.0125
PRO 2770.0136
TRP 2780.0139
GLN 2790.0124
THR 2800.0127
SER 2810.0148
LYS 2820.0155
CYS 2830.0183
PHE 2840.0228
ASP 2880.0120
TYR 2890.0076
GLN 2900.0043
TYR 2910.0038
CYS 2970.0076
ASN 2980.0076
PRO 2990.0074
GLY 3000.0077
LYS 3010.0074
LYS 3020.0071
ASN 3030.0065
THR 3040.0061
ILE 3050.0055
SER 3060.0052
GLY 3070.0050
TYR 3080.0044
LYS 3090.0045
ARG 3100.0049
MET 3110.0043
MET 3120.0040
ALA 3130.0044
THR 3140.0044
LYS 3150.0038
ASP 3160.0038
SER 3170.0041
PHE 3180.0037
GLN 3190.0033
SER 3200.0028
PHE 3210.0025
ASN 3220.0020
LEU 3230.0019
THR 3240.0015
GLU 3250.0016
PRO 3260.0020
HIS 3270.0022
ILE 3280.0025
THR 3290.0029
THR 3300.0032
ASN 3310.0033
LYS 3320.0031
LEU 3330.0028
GLU 3340.0025
TRP 3350.0022
ILE 3360.0019
ASP 3370.0021
PRO 3380.0017
ASP 3390.0021
GLY 3400.0023
ASN 3410.0027
THR 3420.0028
ARG 3430.0030
GLY 3440.0032
GLY 3450.0036
GLY 3460.0036
GLY 10.0036
SER 20.0032
HIS 30.0032
SER 40.0030
MET 50.0032
ARG 60.0029
TYR 70.0030
PHE 80.0028
PHE 90.0029
THR 100.0028
SER 110.0031
VAL 120.0030
SER 130.0033
ARG 140.0035
PRO 150.0037
GLY 160.0041
ARG 170.0041
GLY 180.0042
GLU 190.0041
PRO 200.0037
ARG 210.0035
PHE 220.0035
ILE 230.0033
ALA 240.0033
VAL 250.0033
GLY 260.0034
TYR 270.0032
VAL 280.0034
ASP 290.0031
ASP 300.0030
THR 310.0034
GLN 320.0034
PHE 330.0038
VAL 340.0039
ARG 350.0038
PHE 360.0039
ASP 370.0038
SER 380.0040
ASP 390.0040
ALA 400.0042
ALA 410.0047
SER 420.0049
GLN 430.0047
ARG 440.0047
MET 450.0044
GLU 460.0044
PRO 470.0044
ARG 480.0040
ALA 490.0042
PRO 500.0047
TRP 510.0047
ILE 520.0047
GLU 530.0050
GLN 540.0053
GLU 550.0052
GLY 560.0056
PRO 570.0056
GLU 580.0055
TYR 590.0051
TRP 600.0050
ASP 610.0052
GLY 620.0050
GLU 630.0045
THR 640.0047
ARG 650.0048
LYS 660.0044
VAL 670.0041
LYS 680.0044
ALA 690.0043
HIS 700.0038
SER 710.0039
GLN 720.0041
THR 730.0038
HIS 740.0035
ARG 750.0038
VAL 760.0039
ASP 770.0034
LEU 780.0034
GLY 790.0037
THR 800.0036
LEU 810.0031
ARG 820.0033
GLY 830.0036
TYR 840.0032
TYR 850.0031
ASN 860.0034
GLN 870.0033
SER 880.0036
GLU 890.0037
ALA 900.0034
GLY 910.0031
SER 920.0030
HIS 930.0028
THR 940.0026
VAL 950.0027
GLN 960.0025
ARG 970.0026
MET 980.0025
TYR 990.0026
GLY 1000.0028
CYS 1010.0028
ASP 1020.0028
VAL 1030.0032
GLY 1040.0032
SER 1050.0036
ASP 1060.0039
TRP 1070.0038
ARG 1080.0035
PHE 1090.0031
LEU 1100.0027
ARG 1110.0024
GLY 1120.0025
TYR 1130.0023
HIS 1140.0024
GLN 1150.0021
TYR 1160.0023
ALA 1170.0021
TYR 1180.0023
ASP 1190.0022
GLY 1200.0018
LYS 1210.0016
ASP 1220.0016
TYR 1230.0020
ILE 1240.0021
ALA 1250.0019
LEU 1260.0021
LYS 1270.0017
GLU 1280.0017
ASP 1290.0019
LEU 1300.0023
ARG 1310.0023
SER 1320.0020
TRP 1330.0020
THR 1340.0017
ALA 1350.0019
ALA 1360.0017
ASP 1370.0021
MET 1380.0025
ALA 1390.0027
ALA 1400.0025
GLN 1410.0025
THR 1420.0030
THR 1430.0029
LYS 1440.0026
HIS 1450.0030
LYS 1460.0033
TRP 1470.0031
GLU 1480.0030
ALA 1490.0034
ALA 1500.0036
HIS 1510.0033
VAL 1520.0032
ALA 1530.0028
GLU 1540.0031
GLN 1550.0035
LEU 1560.0031
ARG 1570.0030
ALA 1580.0034
TYR 1590.0035
LEU 1600.0031
GLU 1610.0032
GLY 1620.0037
THR 1630.0039
CYS 1640.0036
VAL 1650.0036
GLU 1660.0041
TRP 1670.0042
LEU 1680.0039
ARG 1690.0042
ARG 1700.0046
TYR 1710.0043
LEU 1720.0043
GLU 1730.0047
ASN 1740.0049
GLY 1750.0046
LYS 1760.0047
GLU 1770.0047
THR 1780.0043
LEU 1790.0040
GLN 1800.0042
ARG 1810.0042
THR 1820.0039
ASP 1830.0039
ALA 1840.0038
PRO 1850.0035
LYS 1860.0036
THR 1870.0035
HIS 1880.0034
MET 1890.0032
THR 1900.0030
HIS 1910.0029
HIS 1920.0026
ALA 1930.0026
VAL 1940.0023
SER 1950.0025
ASP 1960.0030
HIS 1970.0032
GLU 1980.0028
ALA 1990.0027
THR 2000.0025
LEU 2010.0027
ARG 2020.0025
CYS 2030.0028
TRP 2040.0028
ALA 2050.0030
LEU 2060.0031
SER 2070.0034
PHE 2080.0033
TYR 2090.0034
PRO 2100.0031
ALA 2110.0027
GLU 2120.0025
ILE 2130.0026
THR 2140.0024
LEU 2150.0025
THR 2160.0025
TRP 2170.0027
GLN 2180.0030
ARG 2190.0033
ASP 2200.0037
GLY 2210.0035
GLU 2220.0031
ASP 2230.0027
GLN 2240.0024
THR 2250.0020
GLN 2260.0018
ASP 2270.0021
THR 2280.0019
GLU 2290.0016
LEU 2300.0016
VAL 2310.0015
GLU 2320.0016
THR 2330.0021
ARG 2340.0022
PRO 2350.0027
ALA 2360.0030
GLY 2370.0032
ASP 2380.0036
GLY 2390.0036
THR 2400.0033
PHE 2410.0029
GLN 2420.0026
LYS 2430.0023
TRP 2440.0023
ALA 2450.0021
ALA 2460.0022
VAL 2470.0023
VAL 2480.0024
VAL 2490.0029
PRO 2500.0032
SER 2510.0035
GLY 2520.0039
GLN 2530.0037
GLU 2540.0036
GLN 2550.0040
ARG 2560.0038
TYR 2570.0034
THR 2580.0034
CYS 2590.0031
HIS 2600.0031
VAL 2610.0031
GLN 2620.0030
HIS 2630.0032
GLU 2640.0034
GLY 2650.0038
LEU 2660.0038
PRO 2670.0041
LYS 2680.0039
PRO 2690.0036
LEU 2700.0037
THR 2710.0037
LEU 2720.0037
ARG 2730.0039
TRP 2740.0037
GLU 2750.0042
PRO 2760.0046
GLN 2780.0012
ARG 2790.0011
THR 2800.0010
PRO 2810.0011
LYS 2820.0010
ILE 2830.0013
GLN 2840.0016
VAL 2850.0019
TYR 2860.0023
SER 2870.0028
ARG 2880.0031
HIS 2890.0034
PRO 2900.0034
ALA 2910.0033
GLU 2920.0036
ASN 2930.0035
GLY 2940.0038
LYS 2950.0040
SER 2960.0039
ASN 2970.0036
PHE 2980.0032
LEU 2990.0028
ASN 3000.0025
CYS 3010.0021
TYR 3020.0020
VAL 3030.0017
SER 3040.0015
GLY 3050.0012
PHE 3060.0014
HIS 3070.0016
PRO 3080.0020
SER 3090.0022
ASP 3100.0024
ILE 3110.0021
GLU 3120.0022
VAL 3130.0021
ASP 3140.0022
LEU 3150.0023
LEU 3160.0021
LYS 3170.0023
ASN 3180.0020
GLY 3190.0018
GLU 3200.0022
ARG 3210.0025
ILE 3220.0028
GLU 3230.0032
LYS 3240.0035
VAL 3250.0032
GLU 3260.0033
HIS 3270.0030
SER 3280.0030
ASP 3290.0031
LEU 3300.0027
SER 3310.0025
PHE 3320.0020
SER 3330.0017
LYS 3340.0015
ASP 3350.0012
TRP 3360.0016
SER 3370.0015
PHE 3380.0018
TYR 3390.0019
LEU 3400.0023
LEU 3410.0025
TYR 3420.0026
TYR 3430.0029
THR 3440.0032
GLU 3450.0035
PHE 3460.0033
THR 3470.0035
PRO 3480.0031
THR 3490.0031
GLU 3500.0029
LYS 3510.0025
ASP 3520.0024
GLU 3530.0020
TYR 3540.0021
ALA 3550.0017
CYS 3560.0017
ARG 3570.0016
VAL 3580.0016
ASN 3590.0017
HIS 3600.0017
VAL 3610.0019
THR 3620.0015
LEU 3630.0013
SER 3640.0015
GLN 3650.0014
PRO 3660.0014
LYS 3670.0010
ILE 3680.0011
VAL 3690.0012
LYS 3700.0014
TRP 3710.0019
ASP 3720.0020
ARG 3730.0025
ASP 3740.0026
MET 3750.0023
SER 10.0007
GLN 20.0005
PHE 30.0005
ARG 40.0007
VAL 50.0005
SER 60.0006
PRO 70.0007
LEU 80.0010
ASP 90.0013
ARG 100.0012
THR 110.0012
TRP 120.0009
ASN 130.0011
LEU 140.0012
GLY 150.0010
GLU 160.0006
THR 170.0006
VAL 180.0005
GLU 190.0005
LEU 200.0004
LYS 210.0006
CYS 220.0005
GLN 230.0008
VAL 240.0008
LEU 250.0009
LEU 260.0009
SER 270.0012
ASN 280.0013
PRO 290.0013
THR 300.0016
SER 310.0017
GLY 320.0016
CYS 330.0013
SER 340.0013
TRP 350.0012
LEU 360.0013
PHE 370.0015
GLN 380.0018
PRO 390.0020
ARG 400.0022
GLY 410.0026
ALA 420.0029
ALA 430.0028
ALA 440.0025
SER 450.0024
PRO 460.0020
THR 470.0020
PHE 480.0019
LEU 490.0018
LEU 500.0017
TYR 510.0018
LEU 520.0017
SER 530.0020
GLN 540.0023
ASN 550.0026
LYS 560.0026
PRO 570.0022
LYS 580.0024
ALA 590.0023
ALA 600.0024
GLU 610.0029
GLY 620.0029
LEU 630.0024
ASP 640.0023
THR 650.0022
GLN 660.0021
ARG 670.0016
PHE 680.0016
SER 690.0016
GLY 700.0015
LYS 710.0016
ARG 720.0017
LEU 730.0017
GLY 740.0018
ASP 750.0014
THR 760.0012
PHE 770.0011
VAL 780.0010
LEU 790.0009
THR 800.0010
LEU 810.0011
SER 820.0011
ASP 830.0011
PHE 840.0011
ARG 850.0016
ARG 860.0019
GLU 870.0021
ASN 880.0016
GLU 890.0016
GLY 900.0016
TYR 910.0013
TYR 920.0010
PHE 930.0008
CYS 940.0007
SER 950.0009
ALA 960.0010
LEU 970.0012
SER 980.0011
ASN 990.0012
SER 1000.0014
ILE 1010.0011
MET 1020.0011
TYR 1030.0007
PHE 1040.0007
SER 1050.0005
HIS 1060.0008
PHE 1070.0010
VAL 1080.0008
PRO 1090.0012
VAL 1100.0011
PHE 1110.0014
LEU 1120.0016
PRO 1130.0018
ALA 1140.0022
SER 10.0033
GLN 20.0033
PHE 30.0034
ARG 40.0037
VAL 50.0035
SER 60.0037
PRO 70.0039
LEU 80.0039
ASP 90.0043
ARG 100.0042
THR 110.0040
TRP 120.0039
ASN 130.0040
LEU 140.0037
GLY 150.0036
GLU 160.0037
THR 170.0034
VAL 180.0033
GLU 190.0033
LEU 200.0032
LYS 210.0033
CYS 220.0033
GLN 230.0035
VAL 240.0033
LEU 250.0037
LEU 260.0035
SER 270.0038
ASN 280.0036
PRO 290.0034
THR 300.0032
SER 310.0028
GLY 320.0026
CYS 330.0024
SER 340.0020
TRP 350.0021
LEU 360.0019
PHE 370.0020
GLN 380.0020
PRO 390.0023
ARG 400.0027
GLY 410.0025
ALA 420.0023
ALA 430.0018
ALA 440.0018
SER 450.0014
PRO 460.0015
THR 470.0014
PHE 480.0013
LEU 490.0016
LEU 500.0017
TYR 510.0019
LEU 520.0023
SER 530.0025
GLN 540.0028
ASN 550.0024
LYS 560.0021
PRO 570.0019
LYS 580.0015
ALA 590.0013
ALA 600.0010
GLU 610.0007
GLY 620.0010
LEU 630.0013
ASP 640.0017
THR 650.0017
GLN 660.0020
ARG 670.0023
PHE 680.0021
SER 690.0022
GLY 700.0025
LYS 710.0028
ARG 720.0031
LEU 730.0036
GLY 740.0038
ASP 750.0036
THR 760.0035
PHE 770.0031
VAL 780.0030
LEU 790.0027
THR 800.0028
LEU 810.0027
SER 820.0029
ASP 830.0031
PHE 840.0031
ARG 850.0031
ARG 860.0032
GLU 870.0027
ASN 880.0026
GLU 890.0029
GLY 900.0027
TYR 910.0027
TYR 920.0026
PHE 930.0025
CYS 940.0025
SER 950.0023
ALA 960.0025
LEU 970.0024
SER 980.0028
ASN 990.0029
SER 1000.0024
ILE 1010.0024
MET 1020.0022
TYR 1030.0024
PHE 1040.0024
SER 1050.0028
HIS 1060.0030
PHE 1070.0029
VAL 1080.0032
PRO 1090.0033
VAL 1100.0033
PHE 1110.0035
LEU 1120.0038
PRO 1130.0043
ALA 1140.0044

If you find results from this site helpful for your research, please cite one of our papers:

elNémo is maintained by Yves-Henri Sanejouand.
It was developed by Karsten Suhre.
Between 2003 and 2014, it was hosted by IGS (Marseille).
Between 2015 and 2025, it was hosted by US2B (Nantes).
Last modification: april 24th, 2026.