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***  MHC1  ***

<R2> analysis for 2607180828532135053

---  normal mode 13  ---

This page gives a visualization of the normalized mean square displacement <R2> of all C-alpha atoms in the protein that are associated to this mode (black bars). The three components of the corresponding eigenvector are shown on the left (colored bars). Here is the raw data for <R2> and for the eigenvector (shift-click on the links for download).

XYZresidue<R2><R2>max = 0.0980
MET 10.0165
SER 20.0135
THR 30.0123
ILE 40.0089
THR 50.0089
LYS 60.0071
ASP 70.0075
GLN 80.0055
ILE 90.0038
LEU 100.0049
GLU 110.0048
GLY 120.0033
VAL 130.0048
ALA 140.0068
ALA 150.0065
LEU 160.0078
SER 170.0108
VAL 180.0119
MET 190.0128
GLU 200.0104
ILE 210.0087
VAL 220.0107
GLU 230.0110
LEU 240.0081
ILE 250.0077
SER 260.0101
ALA 270.0097
MET 280.0073
GLU 290.0082
GLU 300.0106
LYS 310.0097
PHE 320.0077
GLY 330.0084
VAL 340.0060
SER 350.0068
ALA 360.0057
ALA 370.0067
ALA 380.0052
VAL 390.0040
ALA 400.0056
ALA 410.0052
GLY 420.0050
PRO 430.0048
ALA 440.0051
ALA 450.0051
ALA 460.0047
VAL 470.0048
GLU 480.0048
ALA 490.0045
ALA 500.0045
GLU 510.0046
GLU 520.0041
GLN 530.0041
THR 540.0047
GLU 550.0046
PHE 560.0042
ASP 570.0041
VAL 580.0043
VAL 590.0039
LEU 600.0042
ALA 610.0036
SER 620.0042
PHE 630.0050
GLY 640.0054
GLU 650.0061
ASN 660.0066
LYS 670.0063
VAL 680.0070
ALA 690.0070
VAL 700.0062
ILE 710.0065
LYS 720.0072
ALA 730.0067
VAL 740.0062
ARG 750.0070
GLY 760.0073
ALA 770.0066
THR 780.0065
GLY 790.0073
LEU 800.0070
GLY 810.0074
LEU 820.0073
LYS 830.0068
GLU 840.0063
ALA 850.0062
LYS 860.0061
ASP 870.0055
LEU 880.0051
VAL 890.0052
GLU 900.0049
SER 910.0042
ALA 920.0040
PRO 930.0035
ALA 940.0039
VAL 950.0042
LEU 960.0050
LYS 970.0051
GLU 980.0048
GLY 990.0050
VAL 1000.0053
ASN 1010.0053
LYS 1020.0047
ASP 1030.0054
GLU 1040.0057
ALA 1050.0050
GLU 1060.0049
THR 1070.0058
LEU 1080.0056
LYS 1090.0050
LYS 1100.0056
SER 1110.0062
LEU 1120.0057
GLU 1130.0055
GLU 1140.0063
ALA 1150.0064
GLY 1160.0059
ALA 1170.0052
SER 1180.0044
VAL 1190.0042
GLU 1200.0035
ILE 1210.0036
LYS 1220.0031
GLU 1230.0032
ALA 1240.0037
ALA 1250.0033
ALA 1260.0037
LYS 1270.0040
ALA 1280.0038
TYR 1290.0044
LYS 1300.0045
ILE 1310.0052
ILE 1320.0053
SER 1330.0058
LEU 1340.0061
LYS 1350.0066
TYR 1360.0069
THR 1370.0073
ARG 1380.0076
LYS 1390.0079
VAL 1400.0082
CYS 1410.0085
ILE 1420.0087
GLY 1430.0089
PRO 1440.0092
GLY 1450.0095
PRO 1460.0095
GLY 1470.0096
LYS 1480.0096
ALA 1490.0096
TYR 1500.0095
LYS 1510.0094
ILE 1520.0090
ILE 1530.0088
SER 1540.0085
LEU 1550.0083
LYS 1560.0080
TYR 1570.0077
THR 1580.0073
ARG 1590.0070
LYS 1600.0067
VAL 1610.0064
CYS 1620.0061
GLY 1630.0057
PRO 1640.0059
GLY 1650.0060
PRO 1660.0060
GLY 1670.0063
GLY 1680.0061
LYS 1690.0066
ALA 1700.0065
TYR 1710.0069
LYS 1720.0070
ILE 1730.0073
ILE 1740.0076
SER 1750.0079
LEU 1760.0082
LYS 1770.0084
TYR 1780.0087
THR 1790.0089
ARG 1800.0092
LYS 1810.0094
VAL 1820.0096
GLY 1830.0097
PRO 1840.0097
GLY 1850.0094
PRO 1860.0091
GLY 1870.0090
ILE 1880.0086
ILE 1890.0085
SER 1900.0082
LEU 1910.0080
LYS 1920.0076
TYR 1930.0072
THR 1940.0069
ARG 1950.0065
LYS 1960.0061
VAL 1970.0058
CYS 1980.0053
ILE 1990.0049
GLN 2000.0045
LEU 2010.0039
GLY 2020.0036
GLY 2030.0029
PRO 2040.0023
GLY 2050.0023
PRO 2060.0023
GLY 2070.0028
ASN 2080.0035
ILE 2090.0036
LYS 2100.0038
THR 2110.0042
ALA 2120.0046
PHE 2130.0046
HIS 2140.0048
CYS 2150.0052
TYR 2160.0055
ALA 2170.0055
ALA 2180.0058
TYR 2190.0062
MET 2200.0064
THR 2210.0065
SER 2220.0068
ILE 2230.0072
LYS 2240.0076
ALA 2250.0080
CYS 2260.0068
ASP 2270.0064
LEU 2280.0032
LYS 2290.0052
LYS 2300.0060
PRO 2310.0102
LEU 2320.0163
MET 2330.0216
GLU 2340.0282
SER 2350.0324
GLY 2360.0349
TRP 2370.0333
SER 2380.0326
ASP 2390.0309
THR 2400.0316
ALA 2410.0288
HIS 2420.0269
GLY 2430.0255
LYS 2440.0242
LYS 2450.0237
SER 2460.0262
LEU 2470.0285
PRO 2480.0310
SER 2490.0352
SER 2500.0366
SER 2510.0360
SER 2520.0343
TYR 2530.0316
SER 2540.0296
TYR 2550.0288
ARG 2560.0275
ARG 2570.0293
LYS 2580.0307
LEU 2590.0335
THR 2600.0358
ASN 2610.0388
PRO 2620.0415
ALA 2630.0435
ASN 2640.0410
LYS 2650.0398
GLU 2660.0359
GLU 2670.0351
SER 2680.0322
ILE 2690.0321
LYS 2700.0305
LYS 2710.0292
GLN 2720.0332
LYS 2730.0352
TYR 2740.0401
SER 2750.0436
TYR 2760.0502
PRO 2770.0548
TRP 2780.0606
GLN 2790.0588
THR 2800.0623
SER 2810.0694
LYS 2820.0765
CYS 2830.0827
PHE 2840.0980
ASP 2880.0353
TYR 2890.0300
GLN 2900.0277
TYR 2910.0307
CYS 2970.0099
ASN 2980.0100
PRO 2990.0100
GLY 3000.0105
LYS 3010.0101
LYS 3020.0102
ASN 3030.0095
THR 3040.0088
ILE 3050.0083
SER 3060.0081
GLY 3070.0084
TYR 3080.0076
LYS 3090.0075
ARG 3100.0082
MET 3110.0080
MET 3120.0073
ALA 3130.0076
THR 3140.0080
LYS 3150.0076
ASP 3160.0077
SER 3170.0083
PHE 3180.0082
GLN 3190.0083
SER 3200.0079
PHE 3210.0080
ASN 3220.0077
LEU 3230.0076
THR 3240.0075
GLU 3250.0074
PRO 3260.0074
HIS 3270.0073
ILE 3280.0072
THR 3290.0073
THR 3300.0074
ASN 3310.0078
LYS 3320.0078
LEU 3330.0077
GLU 3340.0078
TRP 3350.0078
ILE 3360.0079
ASP 3370.0083
PRO 3380.0081
ASP 3390.0084
GLY 3400.0089
ASN 3410.0090
THR 3420.0093
ARG 3430.0098
GLY 3440.0101
GLY 3450.0106
GLY 3460.0110
GLY 10.0047
SER 20.0045
HIS 30.0043
SER 40.0040
MET 50.0039
ARG 60.0033
TYR 70.0029
PHE 80.0022
PHE 90.0019
THR 100.0013
SER 110.0010
VAL 120.0005
SER 130.0007
ARG 140.0008
PRO 150.0013
GLY 160.0014
ARG 170.0011
GLY 180.0006
GLU 190.0005
PRO 200.0004
ARG 210.0008
PHE 220.0013
ILE 230.0016
ALA 240.0022
VAL 250.0025
GLY 260.0031
TYR 270.0032
VAL 280.0038
ASP 290.0035
ASP 300.0030
THR 310.0034
GLN 320.0032
PHE 330.0038
VAL 340.0035
ARG 350.0029
PHE 360.0026
ASP 370.0021
SER 380.0018
ASP 390.0019
ALA 400.0026
ALA 410.0031
SER 420.0035
GLN 430.0030
ARG 440.0035
MET 450.0035
GLU 460.0037
PRO 470.0041
ARG 480.0038
ALA 490.0043
PRO 500.0050
TRP 510.0053
ILE 520.0050
GLU 530.0052
GLN 540.0059
GLU 550.0057
GLY 560.0060
PRO 570.0056
GLU 580.0056
TYR 590.0052
TRP 600.0047
ASP 610.0047
GLY 620.0047
GLU 630.0041
THR 640.0037
ARG 650.0039
LYS 660.0037
VAL 670.0031
LYS 680.0028
ALA 690.0031
HIS 700.0028
SER 710.0021
GLN 720.0022
THR 730.0026
HIS 740.0020
ARG 750.0016
VAL 760.0021
ASP 770.0023
LEU 780.0019
GLY 790.0022
THR 800.0028
LEU 810.0028
ARG 820.0027
GLY 830.0033
TYR 840.0036
TYR 850.0036
ASN 860.0038
GLN 870.0032
SER 880.0031
GLU 890.0025
ALA 900.0025
GLY 910.0021
SER 920.0014
HIS 930.0014
THR 940.0012
VAL 950.0016
GLN 960.0017
ARG 970.0023
MET 980.0026
TYR 990.0033
GLY 1000.0038
CYS 1010.0043
ASP 1020.0044
VAL 1030.0050
GLY 1040.0052
SER 1050.0054
ASP 1060.0060
TRP 1070.0057
ARG 1080.0059
PHE 1090.0056
LEU 1100.0052
ARG 1110.0048
GLY 1120.0045
TYR 1130.0039
HIS 1140.0036
GLN 1150.0031
TYR 1160.0028
ALA 1170.0023
TYR 1180.0022
ASP 1190.0018
GLY 1200.0017
LYS 1210.0024
ASP 1220.0028
TYR 1230.0032
ILE 1240.0036
ALA 1250.0038
LEU 1260.0043
LYS 1270.0047
GLU 1280.0048
ASP 1290.0055
LEU 1300.0052
ARG 1310.0057
SER 1320.0054
TRP 1330.0048
THR 1340.0045
ALA 1350.0044
ALA 1360.0042
ASP 1370.0042
MET 1380.0046
ALA 1390.0041
ALA 1400.0040
GLN 1410.0047
THR 1420.0046
THR 1430.0042
LYS 1440.0047
HIS 1450.0052
LYS 1460.0048
TRP 1470.0047
GLU 1480.0054
ALA 1490.0056
ALA 1500.0052
HIS 1510.0056
VAL 1520.0049
ALA 1530.0051
GLU 1540.0057
GLN 1550.0053
LEU 1560.0048
ARG 1570.0054
ALA 1580.0057
TYR 1590.0051
LEU 1600.0049
GLU 1610.0056
GLY 1620.0058
THR 1630.0054
CYS 1640.0049
VAL 1650.0053
GLU 1660.0058
TRP 1670.0053
LEU 1680.0050
ARG 1690.0056
ARG 1700.0058
TYR 1710.0052
LEU 1720.0053
GLU 1730.0060
ASN 1740.0059
GLY 1750.0054
LYS 1760.0056
GLU 1770.0055
THR 1780.0048
LEU 1790.0046
GLN 1800.0050
ARG 1810.0047
THR 1820.0042
ASP 1830.0039
ALA 1840.0036
PRO 1850.0030
LYS 1860.0031
THR 1870.0026
HIS 1880.0025
MET 1890.0020
THR 1900.0023
HIS 1910.0023
HIS 1920.0026
ALA 1930.0029
VAL 1940.0029
SER 1950.0033
ASP 1960.0036
HIS 1970.0030
GLU 1980.0025
ALA 1990.0022
THR 2000.0018
LEU 2010.0014
ARG 2020.0014
CYS 2030.0014
TRP 2040.0019
ALA 2050.0022
LEU 2060.0027
SER 2070.0033
PHE 2080.0031
TYR 2090.0033
PRO 2100.0032
ALA 2110.0025
GLU 2120.0024
ILE 2130.0021
THR 2140.0018
LEU 2150.0012
THR 2160.0010
TRP 2170.0006
GLN 2180.0008
ARG 2190.0007
ASP 2200.0010
GLY 2210.0015
GLU 2220.0016
ASP 2230.0014
GLN 2240.0012
THR 2250.0016
GLN 2260.0017
ASP 2270.0014
THR 2280.0008
GLU 2290.0007
LEU 2300.0004
VAL 2310.0006
GLU 2320.0007
THR 2330.0013
ARG 2340.0017
PRO 2350.0023
ALA 2360.0029
GLY 2370.0032
ASP 2380.0038
GLY 2390.0036
THR 2400.0032
PHE 2410.0025
GLN 2420.0021
LYS 2430.0015
TRP 2440.0012
ALA 2450.0006
ALA 2460.0008
VAL 2470.0009
VAL 2480.0016
VAL 2490.0015
PRO 2500.0020
SER 2510.0022
GLY 2520.0018
GLN 2530.0012
GLU 2540.0011
GLN 2550.0008
ARG 2560.0004
TYR 2570.0004
THR 2580.0009
CYS 2590.0012
HIS 2600.0016
VAL 2610.0020
GLN 2620.0025
HIS 2630.0029
GLU 2640.0036
GLY 2650.0038
LEU 2660.0037
PRO 2670.0042
LYS 2680.0037
PRO 2690.0029
LEU 2700.0026
THR 2710.0021
LEU 2720.0019
ARG 2730.0015
TRP 2740.0014
GLU 2750.0016
PRO 2760.0019
GLN 2780.0023
ARG 2790.0016
THR 2800.0016
PRO 2810.0012
LYS 2820.0012
ILE 2830.0017
GLN 2840.0019
VAL 2850.0026
TYR 2860.0029
SER 2870.0034
ARG 2880.0035
HIS 2890.0039
PRO 2900.0040
ALA 2910.0044
GLU 2920.0051
ASN 2930.0056
GLY 2940.0061
LYS 2950.0057
SER 2960.0054
ASN 2970.0047
PHE 2980.0041
LEU 2990.0037
ASN 3000.0030
CYS 3010.0024
TYR 3020.0018
VAL 3030.0013
SER 3040.0006
GLY 3050.0005
PHE 3060.0008
HIS 3070.0009
PRO 3080.0009
SER 3090.0005
ASP 3100.0011
ILE 3110.0016
GLU 3120.0023
VAL 3130.0025
ASP 3140.0032
LEU 3150.0036
LEU 3160.0042
LYS 3170.0048
ASN 3180.0052
GLY 3190.0049
GLU 3200.0050
ARG 3210.0045
ILE 3220.0045
GLU 3230.0045
LYS 3240.0043
VAL 3250.0037
GLU 3260.0033
HIS 3270.0026
SER 3280.0023
ASP 3290.0021
LEU 3300.0014
SER 3310.0014
PHE 3320.0011
SER 3330.0013
LYS 3340.0018
ASP 3350.0017
TRP 3360.0014
SER 3370.0008
PHE 3380.0004
TYR 3390.0008
LEU 3400.0014
LEU 3410.0021
TYR 3420.0026
TYR 3430.0033
THR 3440.0040
GLU 3450.0046
PHE 3460.0049
THR 3470.0054
PRO 3480.0051
THR 3490.0056
GLU 3500.0056
LYS 3510.0058
ASP 3520.0054
GLU 3530.0049
TYR 3540.0043
ALA 3550.0037
CYS 3560.0032
ARG 3570.0032
VAL 3580.0026
ASN 3590.0026
HIS 3600.0021
VAL 3610.0023
THR 3620.0024
LEU 3630.0028
SER 3640.0036
GLN 3650.0037
PRO 3660.0034
LYS 3670.0031
ILE 3680.0034
VAL 3690.0031
LYS 3700.0036
TRP 3710.0035
ASP 3720.0034
ARG 3730.0036
ASP 3740.0034
MET 3750.0027
SER 10.0027
GLN 20.0023
PHE 30.0028
ARG 40.0033
VAL 50.0039
SER 60.0045
PRO 70.0049
LEU 80.0050
ASP 90.0054
ARG 100.0059
THR 110.0063
TRP 120.0065
ASN 130.0071
LEU 140.0074
GLY 150.0073
GLU 160.0069
THR 170.0064
VAL 180.0059
GLU 190.0054
LEU 200.0049
LYS 210.0043
CYS 220.0037
GLN 230.0031
VAL 240.0026
LEU 250.0021
LEU 260.0016
SER 270.0011
ASN 280.0009
PRO 290.0014
THR 300.0012
SER 310.0019
GLY 320.0025
CYS 330.0030
SER 340.0035
TRP 350.0041
LEU 360.0044
PHE 370.0050
GLN 380.0053
PRO 390.0060
ARG 400.0063
GLY 410.0066
ALA 420.0065
ALA 430.0061
ALA 440.0060
SER 450.0054
PRO 460.0049
THR 470.0049
PHE 480.0045
LEU 490.0047
LEU 500.0042
TYR 510.0036
LEU 520.0035
SER 530.0030
GLN 540.0030
ASN 550.0033
LYS 560.0038
PRO 570.0039
LYS 580.0039
ALA 590.0045
ALA 600.0047
GLU 610.0050
GLY 620.0056
LEU 630.0056
ASP 640.0060
THR 650.0057
GLN 660.0062
ARG 670.0062
PHE 680.0056
SER 690.0051
GLY 700.0046
LYS 710.0043
ARG 720.0038
LEU 730.0038
GLY 740.0032
ASP 750.0028
THR 760.0034
PHE 770.0037
VAL 780.0044
LEU 790.0048
THR 800.0054
LEU 810.0059
SER 820.0064
ASP 830.0069
PHE 840.0067
ARG 850.0071
ARG 860.0071
GLU 870.0068
ASN 880.0064
GLU 890.0064
GLY 900.0059
TYR 910.0053
TYR 920.0048
PHE 930.0042
CYS 940.0036
SER 950.0032
ALA 960.0025
LEU 970.0020
SER 980.0014
ASN 990.0012
SER 1000.0018
ILE 1010.0021
MET 1020.0025
TYR 1030.0027
PHE 1040.0032
SER 1050.0034
HIS 1060.0039
PHE 1070.0045
VAL 1080.0048
PRO 1090.0054
VAL 1100.0058
PHE 1110.0064
LEU 1120.0069
PRO 1130.0070
ALA 1140.0071
SER 10.0054
GLN 20.0049
PHE 30.0050
ARG 40.0056
VAL 50.0057
SER 60.0061
PRO 70.0065
LEU 80.0068
ASP 90.0074
ARG 100.0073
THR 110.0072
TRP 120.0069
ASN 130.0071
LEU 140.0068
GLY 150.0067
GLU 160.0067
THR 170.0063
VAL 180.0060
GLU 190.0058
LEU 200.0055
LYS 210.0053
CYS 220.0050
GLN 230.0049
VAL 240.0044
LEU 250.0046
LEU 260.0041
SER 270.0040
ASN 280.0033
PRO 290.0033
THR 300.0028
SER 310.0025
GLY 320.0028
CYS 330.0033
SER 340.0034
TRP 350.0040
LEU 360.0041
PHE 370.0045
GLN 380.0048
PRO 390.0052
ARG 400.0058
GLY 410.0058
ALA 420.0058
ALA 430.0052
ALA 440.0049
SER 450.0043
PRO 460.0041
THR 470.0037
PHE 480.0033
LEU 490.0035
LEU 500.0033
TYR 510.0030
LEU 520.0032
SER 530.0028
GLN 540.0027
ASN 550.0026
LYS 560.0030
PRO 570.0031
LYS 580.0026
ALA 590.0030
ALA 600.0028
GLU 610.0025
GLY 620.0030
LEU 630.0035
ASP 640.0040
THR 650.0041
GLN 660.0047
ARG 670.0049
PHE 680.0045
SER 690.0044
GLY 700.0042
LYS 710.0042
ARG 720.0040
LEU 730.0045
GLY 740.0042
ASP 750.0042
THR 760.0046
PHE 770.0044
VAL 780.0048
LEU 790.0048
THR 800.0051
LEU 810.0052
SER 820.0057
ASP 830.0060
PHE 840.0060
ARG 850.0058
ARG 860.0060
GLU 870.0053
ASN 880.0053
GLU 890.0058
GLY 900.0056
TYR 910.0055
TYR 920.0051
PHE 930.0048
CYS 940.0043
SER 950.0039
ALA 960.0035
LEU 970.0031
SER 980.0031
ASN 990.0029
SER 1000.0030
ILE 1010.0036
MET 1020.0037
TYR 1030.0042
PHE 1040.0045
SER 1050.0050
HIS 1060.0056
PHE 1070.0056
VAL 1080.0059
PRO 1090.0062
VAL 1100.0062
PHE 1110.0066
LEU 1120.0070
PRO 1130.0077
ALA 1140.0079

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elNémo is maintained by Yves-Henri Sanejouand.
It was developed by Karsten Suhre.
Between 2003 and 2014, it was hosted by IGS (Marseille).
Between 2015 and 2025, it was hosted by US2B (Nantes).
Last modification: april 24th, 2026.