CNRS Nantes University US2B US2B
home |  start a new run |  job status |  references&downloads |  examples |  help  

Should you encounter any unexpected behaviour,
please let us know.
elNémo has been relocated.
**Some cleaning from time to time**
Sorry for the inconvenience.


***  MHC1  ***

<R2> analysis for 2607180828532135053

---  normal mode 14  ---

This page gives a visualization of the normalized mean square displacement <R2> of all C-alpha atoms in the protein that are associated to this mode (black bars). The three components of the corresponding eigenvector are shown on the left (colored bars). Here is the raw data for <R2> and for the eigenvector (shift-click on the links for download).

XYZresidue<R2><R2>max = 0.1748
MET 10.0009
SER 20.0009
THR 30.0010
ILE 40.0010
THR 50.0011
LYS 60.0012
ASP 70.0012
GLN 80.0010
ILE 90.0010
LEU 100.0011
GLU 110.0010
GLY 120.0009
VAL 130.0009
ALA 140.0010
ALA 150.0009
LEU 160.0009
SER 170.0008
VAL 180.0009
MET 190.0009
GLU 200.0009
ILE 210.0009
VAL 220.0010
GLU 230.0011
LEU 240.0010
ILE 250.0011
SER 260.0012
ALA 270.0012
MET 280.0012
GLU 290.0013
GLU 300.0014
LYS 310.0014
PHE 320.0014
GLY 330.0015
VAL 340.0015
SER 350.0014
ALA 360.0014
ALA 370.0014
ALA 380.0015
VAL 390.0015
ALA 400.0015
ALA 410.0015
GLY 420.0015
PRO 430.0016
ALA 440.0016
ALA 450.0016
ALA 460.0016
VAL 470.0016
GLU 480.0016
ALA 490.0015
ALA 500.0016
GLU 510.0016
GLU 520.0016
GLN 530.0015
THR 540.0016
GLU 550.0015
PHE 560.0015
ASP 570.0015
VAL 580.0015
VAL 590.0014
LEU 600.0015
ALA 610.0014
SER 620.0015
PHE 630.0017
GLY 640.0018
GLU 650.0020
ASN 660.0021
LYS 670.0020
VAL 680.0022
ALA 690.0022
VAL 700.0020
ILE 710.0020
LYS 720.0022
ALA 730.0021
VAL 740.0020
ARG 750.0021
GLY 760.0022
ALA 770.0021
THR 780.0020
GLY 790.0022
LEU 800.0021
GLY 810.0022
LEU 820.0022
LYS 830.0020
GLU 840.0019
ALA 850.0019
LYS 860.0019
ASP 870.0018
LEU 880.0017
VAL 890.0017
GLU 900.0017
SER 910.0015
ALA 920.0015
PRO 930.0013
ALA 940.0014
VAL 950.0015
LEU 960.0016
LYS 970.0017
GLU 980.0016
GLY 990.0016
VAL 1000.0017
ASN 1010.0018
LYS 1020.0017
ASP 1030.0019
GLU 1040.0019
ALA 1050.0017
GLU 1060.0018
THR 1070.0020
LEU 1080.0019
LYS 1090.0018
LYS 1100.0019
SER 1110.0020
LEU 1120.0019
GLU 1130.0019
GLU 1140.0021
ALA 1150.0021
GLY 1160.0019
ALA 1170.0018
SER 1180.0016
VAL 1190.0015
GLU 1200.0014
ILE 1210.0014
LYS 1220.0013
GLU 1230.0013
ALA 1240.0013
ALA 1250.0012
ALA 1260.0012
LYS 1270.0012
ALA 1280.0012
TYR 1290.0012
LYS 1300.0012
ILE 1310.0012
ILE 1320.0013
SER 1330.0013
LEU 1340.0014
LYS 1350.0014
TYR 1360.0016
THR 1370.0016
ARG 1380.0017
LYS 1390.0017
VAL 1400.0017
CYS 1410.0018
ILE 1420.0017
GLY 1430.0018
PRO 1440.0017
GLY 1450.0018
PRO 1460.0016
GLY 1470.0012
LYS 1480.0012
ALA 1490.0010
TYR 1500.0011
LYS 1510.0011
ILE 1520.0010
ILE 1530.0011
SER 1540.0010
LEU 1550.0011
LYS 1560.0011
TYR 1570.0012
THR 1580.0011
ARG 1590.0012
LYS 1600.0011
VAL 1610.0012
CYS 1620.0012
GLY 1630.0013
PRO 1640.0012
GLY 1650.0013
PRO 1660.0016
GLY 1670.0017
GLY 1680.0020
LYS 1690.0023
ALA 1700.0019
TYR 1710.0020
LYS 1720.0018
ILE 1730.0016
ILE 1740.0016
SER 1750.0014
LEU 1760.0014
LYS 1770.0012
TYR 1780.0013
THR 1790.0011
ARG 1800.0011
LYS 1810.0010
VAL 1820.0010
GLY 1830.0010
PRO 1840.0010
GLY 1850.0012
PRO 1860.0014
GLY 1870.0013
ILE 1880.0014
ILE 1890.0013
SER 1900.0013
LEU 1910.0013
LYS 1920.0013
TYR 1930.0013
THR 1940.0012
ARG 1950.0013
LYS 1960.0013
VAL 1970.0013
CYS 1980.0012
ILE 1990.0013
GLN 2000.0012
LEU 2010.0011
GLY 2020.0011
GLY 2030.0010
PRO 2040.0008
GLY 2050.0008
PRO 2060.0007
GLY 2070.0008
ASN 2080.0009
ILE 2090.0008
LYS 2100.0008
THR 2110.0009
ALA 2120.0011
PHE 2130.0010
HIS 2140.0009
CYS 2150.0011
TYR 2160.0012
ALA 2170.0011
ALA 2180.0011
TYR 2190.0013
MET 2200.0013
THR 2210.0012
SER 2220.0013
ILE 2230.0014
LYS 2240.0014
ALA 2250.0015
CYS 2260.0013
ASP 2270.0011
LEU 2280.0005
LYS 2290.0006
LYS 2300.0008
PRO 2310.0017
LEU 2320.0027
MET 2330.0037
GLU 2340.0048
SER 2350.0055
GLY 2360.0061
TRP 2370.0059
SER 2380.0058
ASP 2390.0055
THR 2400.0057
ALA 2410.0053
HIS 2420.0051
GLY 2430.0049
LYS 2440.0047
LYS 2450.0046
SER 2460.0049
LEU 2470.0052
PRO 2480.0055
SER 2490.0060
SER 2500.0062
SER 2510.0061
SER 2520.0059
TYR 2530.0056
SER 2540.0053
TYR 2550.0053
ARG 2560.0052
ARG 2570.0054
LYS 2580.0057
LEU 2590.0061
THR 2600.0065
ASN 2610.0069
PRO 2620.0073
ALA 2630.0077
ASN 2640.0073
LYS 2650.0073
GLU 2660.0066
GLU 2670.0066
SER 2680.0061
ILE 2690.0061
LYS 2700.0058
LYS 2710.0055
GLN 2720.0061
LYS 2730.0062
TYR 2740.0069
SER 2750.0073
TYR 2760.0082
PRO 2770.0087
TRP 2780.0095
GLN 2790.0093
THR 2800.0097
SER 2810.0106
LYS 2820.0116
CYS 2830.0122
PHE 2840.0140
ASP 2880.1748
TYR 2890.1456
GLN 2900.1035
TYR 2910.1435
CYS 2970.0033
ASN 2980.0032
PRO 2990.0031
GLY 3000.0032
LYS 3010.0029
LYS 3020.0028
ASN 3030.0026
THR 3040.0025
ILE 3050.0022
SER 3060.0021
GLY 3070.0021
TYR 3080.0018
LYS 3090.0018
ARG 3100.0019
MET 3110.0017
MET 3120.0016
ALA 3130.0016
THR 3140.0016
LYS 3150.0014
ASP 3160.0014
SER 3170.0015
PHE 3180.0015
GLN 3190.0014
SER 3200.0013
PHE 3210.0013
ASN 3220.0012
LEU 3230.0012
THR 3240.0012
GLU 3250.0012
PRO 3260.0012
HIS 3270.0012
ILE 3280.0011
THR 3290.0011
THR 3300.0011
ASN 3310.0012
LYS 3320.0013
LEU 3330.0013
GLU 3340.0013
TRP 3350.0013
ILE 3360.0013
ASP 3370.0014
PRO 3380.0013
ASP 3390.0013
GLY 3400.0014
ASN 3410.0015
THR 3420.0016
ARG 3430.0017
GLY 3440.0018
GLY 3450.0019
GLY 3460.0020
GLY 10.0010
SER 20.0009
HIS 30.0008
SER 40.0007
MET 50.0007
ARG 60.0005
TYR 70.0004
PHE 80.0003
PHE 90.0002
THR 100.0003
SER 110.0003
VAL 120.0004
SER 130.0005
ARG 140.0006
PRO 150.0007
GLY 160.0008
ARG 170.0007
GLY 180.0005
GLU 190.0003
PRO 200.0004
ARG 210.0004
PHE 220.0003
ILE 230.0004
ALA 240.0004
VAL 250.0005
GLY 260.0006
TYR 270.0007
VAL 280.0008
ASP 290.0008
ASP 300.0008
THR 310.0009
GLN 320.0008
PHE 330.0009
VAL 340.0008
ARG 350.0006
PHE 360.0005
ASP 370.0005
SER 380.0004
ASP 390.0005
ALA 400.0006
ALA 410.0006
SER 420.0007
GLN 430.0005
ARG 440.0006
MET 450.0007
GLU 460.0008
PRO 470.0009
ARG 480.0010
ALA 490.0011
PRO 500.0013
TRP 510.0013
ILE 520.0011
GLU 530.0012
GLN 540.0013
GLU 550.0012
GLY 560.0013
PRO 570.0012
GLU 580.0011
TYR 590.0010
TRP 600.0009
ASP 610.0009
GLY 620.0009
GLU 630.0007
THR 640.0007
ARG 650.0007
LYS 660.0006
VAL 670.0005
LYS 680.0004
ALA 690.0005
HIS 700.0004
SER 710.0002
GLN 720.0003
THR 730.0004
HIS 740.0003
ARG 750.0003
VAL 760.0005
ASP 770.0005
LEU 780.0005
GLY 790.0006
THR 800.0007
LEU 810.0007
ARG 820.0008
GLY 830.0009
TYR 840.0009
TYR 850.0010
ASN 860.0010
GLN 870.0010
SER 880.0010
GLU 890.0009
ALA 900.0010
GLY 910.0009
SER 920.0007
HIS 930.0006
THR 940.0005
VAL 950.0003
GLN 960.0002
ARG 970.0002
MET 980.0002
TYR 990.0004
GLY 1000.0005
CYS 1010.0006
ASP 1020.0007
VAL 1030.0009
GLY 1040.0009
SER 1050.0011
ASP 1060.0012
TRP 1070.0011
ARG 1080.0011
PHE 1090.0009
LEU 1100.0008
ARG 1110.0006
GLY 1120.0006
TYR 1130.0004
HIS 1140.0004
GLN 1150.0003
TYR 1160.0003
ALA 1170.0004
TYR 1180.0005
ASP 1190.0006
GLY 1200.0005
LYS 1210.0005
ASP 1220.0004
TYR 1230.0005
ILE 1240.0005
ALA 1250.0005
LEU 1260.0005
LYS 1270.0006
GLU 1280.0005
ASP 1290.0007
LEU 1300.0007
ARG 1310.0009
SER 1320.0008
TRP 1330.0007
THR 1340.0006
ALA 1350.0007
ALA 1360.0007
ASP 1370.0008
MET 1380.0010
ALA 1390.0009
ALA 1400.0008
GLN 1410.0009
THR 1420.0009
THR 1430.0008
LYS 1440.0008
HIS 1450.0010
LYS 1460.0009
TRP 1470.0008
GLU 1480.0010
ALA 1490.0011
ALA 1500.0010
HIS 1510.0010
VAL 1520.0008
ALA 1530.0008
GLU 1540.0010
GLN 1550.0009
LEU 1560.0008
ARG 1570.0008
ALA 1580.0010
TYR 1590.0009
LEU 1600.0008
GLU 1610.0009
GLY 1620.0010
THR 1630.0010
CYS 1640.0008
VAL 1650.0009
GLU 1660.0011
TRP 1670.0010
LEU 1680.0010
ARG 1690.0011
ARG 1700.0012
TYR 1710.0011
LEU 1720.0012
GLU 1730.0014
ASN 1740.0014
GLY 1750.0013
LYS 1760.0014
GLU 1770.0014
THR 1780.0013
LEU 1790.0012
GLN 1800.0012
ARG 1810.0013
THR 1820.0012
ASP 1830.0013
ALA 1840.0013
PRO 1850.0013
LYS 1860.0015
THR 1870.0015
HIS 1880.0016
MET 1890.0016
THR 1900.0017
HIS 1910.0017
HIS 1920.0018
ALA 1930.0019
VAL 1940.0018
SER 1950.0020
ASP 1960.0021
HIS 1970.0020
GLU 1980.0018
ALA 1990.0017
THR 2000.0016
LEU 2010.0015
ARG 2020.0014
CYS 2030.0014
TRP 2040.0014
ALA 2050.0013
LEU 2060.0013
SER 2070.0013
PHE 2080.0012
TYR 2090.0011
PRO 2100.0010
ALA 2110.0009
GLU 2120.0008
ILE 2130.0009
THR 2140.0008
LEU 2150.0010
THR 2160.0010
TRP 2170.0011
GLN 2180.0011
ARG 2190.0012
ASP 2200.0012
GLY 2210.0011
GLU 2220.0010
ASP 2230.0009
GLN 2240.0010
THR 2250.0009
GLN 2260.0010
ASP 2270.0011
THR 2280.0011
GLU 2290.0011
LEU 2300.0010
VAL 2310.0010
GLU 2320.0009
THR 2330.0009
ARG 2340.0010
PRO 2350.0010
ALA 2360.0012
GLY 2370.0012
ASP 2380.0013
GLY 2390.0012
THR 2400.0012
PHE 2410.0011
GLN 2420.0012
LYS 2430.0011
TRP 2440.0012
ALA 2450.0012
ALA 2460.0013
VAL 2470.0013
VAL 2480.0015
VAL 2490.0015
PRO 2500.0017
SER 2510.0018
GLY 2520.0018
GLN 2530.0017
GLU 2540.0016
GLN 2550.0016
ARG 2560.0015
TYR 2570.0014
THR 2580.0013
CYS 2590.0012
HIS 2600.0011
VAL 2610.0011
GLN 2620.0010
HIS 2630.0010
GLU 2640.0010
GLY 2650.0012
LEU 2660.0012
PRO 2670.0013
LYS 2680.0012
PRO 2690.0011
LEU 2700.0012
THR 2710.0013
LEU 2720.0014
ARG 2730.0015
TRP 2740.0016
GLU 2750.0017
PRO 2760.0017
GLN 2780.0010
ARG 2790.0008
THR 2800.0010
PRO 2810.0009
LYS 2820.0010
ILE 2830.0011
GLN 2840.0012
VAL 2850.0014
TYR 2860.0014
SER 2870.0015
ARG 2880.0015
HIS 2890.0016
PRO 2900.0017
ALA 2910.0018
GLU 2920.0020
ASN 2930.0021
GLY 2940.0022
LYS 2950.0020
SER 2960.0019
ASN 2970.0017
PHE 2980.0015
LEU 2990.0015
ASN 3000.0013
CYS 3010.0012
TYR 3020.0011
VAL 3030.0010
SER 3040.0008
GLY 3050.0007
PHE 3060.0008
HIS 3070.0007
PRO 3080.0007
SER 3090.0006
ASP 3100.0008
ILE 3110.0009
GLU 3120.0011
VAL 3130.0011
ASP 3140.0013
LEU 3150.0014
LEU 3160.0016
LYS 3170.0018
ASN 3180.0019
GLY 3190.0018
GLU 3200.0018
ARG 3210.0016
ILE 3220.0016
GLU 3230.0015
LYS 3240.0014
VAL 3250.0013
GLU 3260.0011
HIS 3270.0010
SER 3280.0009
ASP 3290.0007
LEU 3300.0006
SER 3310.0005
PHE 3320.0004
SER 3330.0004
LYS 3340.0003
ASP 3350.0004
TRP 3360.0004
SER 3370.0005
PHE 3380.0006
TYR 3390.0007
LEU 3400.0008
LEU 3410.0010
TYR 3420.0011
TYR 3430.0013
THR 3440.0014
GLU 3450.0016
PHE 3460.0017
THR 3470.0019
PRO 3480.0019
THR 3490.0021
GLU 3500.0022
LYS 3510.0022
ASP 3520.0020
GLU 3530.0019
TYR 3540.0017
ALA 3550.0016
CYS 3560.0014
ARG 3570.0014
VAL 3580.0012
ASN 3590.0012
HIS 3600.0011
VAL 3610.0011
THR 3620.0011
LEU 3630.0012
SER 3640.0014
GLN 3650.0015
PRO 3660.0014
LYS 3670.0014
ILE 3680.0015
VAL 3690.0015
LYS 3700.0016
TRP 3710.0016
ASP 3720.0017
ARG 3730.0017
ASP 3740.0018
MET 3750.0016
SER 10.0006
GLN 20.0005
PHE 30.0004
ARG 40.0004
VAL 50.0004
SER 60.0005
PRO 70.0006
LEU 80.0007
ASP 90.0008
ARG 100.0009
THR 110.0009
TRP 120.0009
ASN 130.0010
LEU 140.0010
GLY 150.0009
GLU 160.0009
THR 170.0007
VAL 180.0006
GLU 190.0005
LEU 200.0005
LYS 210.0003
CYS 220.0003
GLN 230.0002
VAL 240.0003
LEU 250.0004
LEU 260.0005
SER 270.0006
ASN 280.0007
PRO 290.0007
THR 300.0008
SER 310.0007
GLY 320.0005
CYS 330.0004
SER 340.0005
TRP 350.0004
LEU 360.0006
PHE 370.0007
GLN 380.0009
PRO 390.0010
ARG 400.0011
GLY 410.0013
ALA 420.0014
ALA 430.0013
ALA 440.0012
SER 450.0011
PRO 460.0009
THR 470.0008
PHE 480.0006
LEU 490.0005
LEU 500.0004
TYR 510.0004
LEU 520.0003
SER 530.0004
GLN 540.0005
ASN 550.0005
LYS 560.0004
PRO 570.0003
LYS 580.0004
ALA 590.0003
ALA 600.0005
GLU 610.0005
GLY 620.0005
LEU 630.0004
ASP 640.0004
THR 650.0003
GLN 660.0004
ARG 670.0005
PHE 680.0004
SER 690.0003
GLY 700.0002
LYS 710.0002
ARG 720.0002
LEU 730.0003
GLY 740.0003
ASP 750.0003
THR 760.0002
PHE 770.0002
VAL 780.0002
LEU 790.0003
THR 800.0004
LEU 810.0005
SER 820.0006
ASP 830.0008
PHE 840.0008
ARG 850.0009
ARG 860.0010
GLU 870.0009
ASN 880.0008
GLU 890.0009
GLY 900.0009
TYR 910.0008
TYR 920.0006
PHE 930.0006
CYS 940.0005
SER 950.0006
ALA 960.0006
LEU 970.0007
SER 980.0008
ASN 990.0010
SER 1000.0011
ILE 1010.0010
MET 1020.0009
TYR 1030.0007
PHE 1040.0007
SER 1050.0006
HIS 1060.0007
PHE 1070.0008
VAL 1080.0007
PRO 1090.0008
VAL 1100.0008
PHE 1110.0010
LEU 1120.0011
PRO 1130.0012
ALA 1140.0013
SER 10.0011
GLN 20.0011
PHE 30.0012
ARG 40.0014
VAL 50.0015
SER 60.0017
PRO 70.0018
LEU 80.0017
ASP 90.0019
ARG 100.0020
THR 110.0020
TRP 120.0020
ASN 130.0021
LEU 140.0021
GLY 150.0021
GLU 160.0021
THR 170.0020
VAL 180.0019
GLU 190.0018
LEU 200.0017
LYS 210.0016
CYS 220.0015
GLN 230.0015
VAL 240.0013
LEU 250.0012
LEU 260.0011
SER 270.0010
ASN 280.0011
PRO 290.0012
THR 300.0013
SER 310.0011
GLY 320.0012
CYS 330.0012
SER 340.0012
TRP 350.0013
LEU 360.0012
PHE 370.0012
GLN 380.0012
PRO 390.0013
ARG 400.0014
GLY 410.0014
ALA 420.0012
ALA 430.0011
ALA 440.0011
SER 450.0010
PRO 460.0010
THR 470.0010
PHE 480.0011
LEU 490.0012
LEU 500.0013
TYR 510.0013
LEU 520.0014
SER 530.0014
GLN 540.0015
ASN 550.0015
LYS 560.0016
PRO 570.0015
LYS 580.0013
ALA 590.0013
ALA 600.0012
GLU 610.0011
GLY 620.0013
LEU 630.0014
ASP 640.0015
THR 650.0016
GLN 660.0018
ARG 670.0018
PHE 680.0016
SER 690.0017
GLY 700.0016
LYS 710.0017
ARG 720.0016
LEU 730.0018
GLY 740.0017
ASP 750.0015
THR 760.0016
PHE 770.0015
VAL 780.0017
LEU 790.0016
THR 800.0018
LEU 810.0018
SER 820.0019
ASP 830.0020
PHE 840.0019
ARG 850.0018
ARG 860.0018
GLU 870.0016
ASN 880.0016
GLU 890.0016
GLY 900.0015
TYR 910.0014
TYR 920.0014
PHE 930.0013
CYS 940.0012
SER 950.0010
ALA 960.0010
LEU 970.0009
SER 980.0009
ASN 990.0007
SER 1000.0006
ILE 1010.0006
MET 1020.0007
TYR 1030.0009
PHE 1040.0010
SER 1050.0012
HIS 1060.0013
PHE 1070.0013
VAL 1080.0015
PRO 1090.0016
VAL 1100.0017
PHE 1110.0018
LEU 1120.0020
PRO 1130.0021
ALA 1140.0021

If you find results from this site helpful for your research, please cite one of our papers:

elNémo is maintained by Yves-Henri Sanejouand.
It was developed by Karsten Suhre.
Between 2003 and 2014, it was hosted by IGS (Marseille).
Between 2015 and 2025, it was hosted by US2B (Nantes).
Last modification: april 24th, 2026.