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***  MHC1  ***

<R2> analysis for 2607180828532135053

---  normal mode 15  ---

This page gives a visualization of the normalized mean square displacement <R2> of all C-alpha atoms in the protein that are associated to this mode (black bars). The three components of the corresponding eigenvector are shown on the left (colored bars). Here is the raw data for <R2> and for the eigenvector (shift-click on the links for download).

XYZresidue<R2><R2>max = 0.0749
MET 10.0742
SER 20.0614
THR 30.0569
ILE 40.0458
THR 50.0382
LYS 60.0304
ASP 70.0231
GLN 80.0264
ILE 90.0302
LEU 100.0223
GLU 110.0207
GLY 120.0293
VAL 130.0332
ALA 140.0299
ALA 150.0340
LEU 160.0431
SER 170.0521
VAL 180.0558
MET 190.0638
GLU 200.0577
ILE 210.0512
VAL 220.0604
GLU 230.0651
LEU 240.0565
ILE 250.0563
SER 260.0670
ALA 270.0674
MET 280.0605
GLU 290.0655
GLU 300.0749
LYS 310.0719
PHE 320.0666
GLY 330.0706
VAL 340.0612
SER 350.0593
ALA 360.0529
ALA 370.0495
ALA 380.0489
VAL 390.0471
ALA 400.0425
ALA 410.0398
GLY 420.0431
PRO 430.0418
ALA 440.0338
ALA 450.0305
ALA 460.0325
VAL 470.0234
GLU 480.0148
ALA 490.0181
ALA 500.0103
GLU 510.0019
GLU 520.0024
GLN 530.0029
THR 540.0034
GLU 550.0039
PHE 560.0039
ASP 570.0038
VAL 580.0039
VAL 590.0039
LEU 600.0040
ALA 610.0039
SER 620.0040
PHE 630.0042
GLY 640.0045
GLU 650.0046
ASN 660.0047
LYS 670.0043
VAL 680.0045
ALA 690.0048
VAL 700.0045
ILE 710.0043
LYS 720.0047
ALA 730.0047
VAL 740.0043
ARG 750.0043
GLY 760.0047
ALA 770.0045
THR 780.0041
GLY 790.0043
LEU 800.0039
GLY 810.0040
LEU 820.0041
LYS 830.0037
GLU 840.0035
ALA 850.0038
LYS 860.0037
ASP 870.0032
LEU 880.0034
VAL 890.0037
GLU 900.0034
SER 910.0031
ALA 920.0034
PRO 930.0035
ALA 940.0034
VAL 950.0035
LEU 960.0038
LYS 970.0038
GLU 980.0036
GLY 990.0036
VAL 1000.0040
ASN 1010.0041
LYS 1020.0043
ASP 1030.0046
GLU 1040.0045
ALA 1050.0044
GLU 1060.0047
THR 1070.0049
LEU 1080.0046
LYS 1090.0047
LYS 1100.0050
SER 1110.0050
LEU 1120.0047
GLU 1130.0049
GLU 1140.0052
ALA 1150.0050
GLY 1160.0049
ALA 1170.0046
SER 1180.0045
VAL 1190.0043
GLU 1200.0042
ILE 1210.0041
LYS 1220.0039
GLU 1230.0038
ALA 1240.0037
ALA 1250.0036
ALA 1260.0041
LYS 1270.0039
ALA 1280.0041
TYR 1290.0041
LYS 1300.0042
ILE 1310.0044
ILE 1320.0042
SER 1330.0045
LEU 1340.0043
LYS 1350.0045
TYR 1360.0044
THR 1370.0046
ARG 1380.0045
LYS 1390.0046
VAL 1400.0046
CYS 1410.0047
ILE 1420.0048
GLY 1430.0047
PRO 1440.0050
GLY 1450.0050
PRO 1460.0051
GLY 1470.0055
LYS 1480.0057
ALA 1490.0059
TYR 1500.0058
LYS 1510.0059
ILE 1520.0057
ILE 1530.0056
SER 1540.0055
LEU 1550.0054
LYS 1560.0053
TYR 1570.0050
THR 1580.0050
ARG 1590.0047
LYS 1600.0047
VAL 1610.0044
CYS 1620.0043
GLY 1630.0040
PRO 1640.0039
GLY 1650.0040
PRO 1660.0039
GLY 1670.0036
GLY 1680.0036
LYS 1690.0038
ALA 1700.0040
TYR 1710.0043
LYS 1720.0044
ILE 1730.0048
ILE 1740.0049
SER 1750.0053
LEU 1760.0055
LYS 1770.0057
TYR 1780.0058
THR 1790.0060
ARG 1800.0062
LYS 1810.0063
VAL 1820.0063
GLY 1830.0063
PRO 1840.0061
GLY 1850.0057
PRO 1860.0053
GLY 1870.0054
ILE 1880.0051
ILE 1890.0051
SER 1900.0051
LEU 1910.0049
LYS 1920.0049
TYR 1930.0047
THR 1940.0047
ARG 1950.0044
LYS 1960.0044
VAL 1970.0041
CYS 1980.0040
ILE 1990.0038
GLN 2000.0037
LEU 2010.0036
GLY 2020.0033
GLY 2030.0033
PRO 2040.0033
GLY 2050.0029
PRO 2060.0028
GLY 2070.0025
ASN 2080.0026
ILE 2090.0029
LYS 2100.0025
THR 2110.0023
ALA 2120.0027
PHE 2130.0028
HIS 2140.0023
CYS 2150.0024
TYR 2160.0029
ALA 2170.0026
ALA 2180.0021
TYR 2190.0026
MET 2200.0029
THR 2210.0024
SER 2220.0023
ILE 2230.0029
LYS 2240.0027
ALA 2250.0032
CYS 2260.0036
ASP 2270.0035
LEU 2280.0037
LYS 2290.0036
LYS 2300.0037
PRO 2310.0038
LEU 2320.0039
MET 2330.0037
GLU 2340.0044
SER 2350.0039
GLY 2360.0044
TRP 2370.0041
SER 2380.0034
ASP 2390.0032
THR 2400.0034
ALA 2410.0029
HIS 2420.0031
GLY 2430.0032
LYS 2440.0035
LYS 2450.0039
SER 2460.0042
LEU 2470.0043
PRO 2480.0051
SER 2490.0053
SER 2500.0051
SER 2510.0044
SER 2520.0037
TYR 2530.0034
SER 2540.0035
TYR 2550.0034
ARG 2560.0041
ARG 2570.0040
LYS 2580.0049
LEU 2590.0052
THR 2600.0060
ASN 2610.0066
PRO 2620.0069
ALA 2630.0081
ASN 2640.0079
LYS 2650.0082
GLU 2660.0075
GLU 2670.0073
SER 2680.0067
ILE 2690.0059
LYS 2700.0059
LYS 2710.0048
GLN 2720.0041
LYS 2730.0035
TYR 2740.0030
SER 2750.0031
TYR 2760.0036
PRO 2770.0040
TRP 2780.0051
GLN 2790.0054
THR 2800.0059
SER 2810.0067
LYS 2820.0085
CYS 2830.0092
PHE 2840.0119
ASP 2880.0074
TYR 2890.0065
GLN 2900.0066
TYR 2910.0079
CYS 2970.0114
ASN 2980.0111
PRO 2990.0105
GLY 3000.0109
LYS 3010.0099
LYS 3020.0093
ASN 3030.0082
THR 3040.0077
ILE 3050.0066
SER 3060.0062
GLY 3070.0058
TYR 3080.0048
LYS 3090.0047
ARG 3100.0051
MET 3110.0042
MET 3120.0035
ALA 3130.0040
THR 3140.0038
LYS 3150.0029
ASP 3160.0026
SER 3170.0031
PHE 3180.0027
GLN 3190.0021
SER 3200.0017
PHE 3210.0016
ASN 3220.0015
LEU 3230.0020
THR 3240.0021
GLU 3250.0027
PRO 3260.0029
HIS 3270.0034
ILE 3280.0037
THR 3290.0042
THR 3300.0046
ASN 3310.0045
LYS 3320.0041
LEU 3330.0035
GLU 3340.0032
TRP 3350.0027
ILE 3360.0022
ASP 3370.0018
PRO 3380.0014
ASP 3390.0009
GLY 3400.0011
ASN 3410.0012
THR 3420.0017
ARG 3430.0016
GLY 3440.0021
GLY 3450.0021
GLY 3460.0024
GLY 10.0054
SER 20.0051
HIS 30.0052
SER 40.0050
MET 50.0052
ARG 60.0049
TYR 70.0050
PHE 80.0046
PHE 90.0048
THR 100.0046
SER 110.0047
VAL 120.0045
SER 130.0048
ARG 140.0049
PRO 150.0050
GLY 160.0054
ARG 170.0054
GLY 180.0056
GLU 190.0057
PRO 200.0052
ARG 210.0051
PHE 220.0052
ILE 230.0050
ALA 240.0052
VAL 250.0051
GLY 260.0053
TYR 270.0052
VAL 280.0053
ASP 290.0050
ASP 300.0047
THR 310.0052
GLN 320.0052
PHE 330.0058
VAL 340.0058
ARG 350.0056
PHE 360.0057
ASP 370.0055
SER 380.0058
ASP 390.0057
ALA 400.0059
ALA 410.0064
SER 420.0067
GLN 430.0066
ARG 440.0066
MET 450.0064
GLU 460.0063
PRO 470.0063
ARG 480.0059
ALA 490.0061
PRO 500.0065
TRP 510.0067
ILE 520.0067
GLU 530.0070
GLN 540.0074
GLU 550.0074
GLY 560.0078
PRO 570.0078
GLU 580.0078
TYR 590.0073
TRP 600.0071
ASP 610.0074
GLY 620.0072
GLU 630.0067
THR 640.0067
ARG 650.0069
LYS 660.0065
VAL 670.0061
LYS 680.0063
ALA 690.0063
HIS 700.0058
SER 710.0057
GLN 720.0060
THR 730.0057
HIS 740.0053
ARG 750.0055
VAL 760.0056
ASP 770.0051
LEU 780.0049
GLY 790.0053
THR 800.0051
LEU 810.0046
ARG 820.0047
GLY 830.0049
TYR 840.0046
TYR 850.0043
ASN 860.0046
GLN 870.0044
SER 880.0045
GLU 890.0046
ALA 900.0042
GLY 910.0042
SER 920.0042
HIS 930.0042
THR 940.0041
VAL 950.0043
GLN 960.0042
ARG 970.0045
MET 980.0044
TYR 990.0047
GLY 1000.0049
CYS 1010.0050
ASP 1020.0049
VAL 1030.0052
GLY 1040.0052
SER 1050.0056
ASP 1060.0059
TRP 1070.0059
ARG 1080.0057
PHE 1090.0054
LEU 1100.0049
ARG 1110.0046
GLY 1120.0046
TYR 1130.0044
HIS 1140.0044
GLN 1150.0041
TYR 1160.0041
ALA 1170.0038
TYR 1180.0039
ASP 1190.0036
GLY 1200.0033
LYS 1210.0032
ASP 1220.0033
TYR 1230.0037
ILE 1240.0039
ALA 1250.0039
LEU 1260.0042
LYS 1270.0038
GLU 1280.0039
ASP 1290.0042
LEU 1300.0045
ARG 1310.0046
SER 1320.0042
TRP 1330.0041
THR 1340.0036
ALA 1350.0037
ALA 1360.0032
ASP 1370.0035
MET 1380.0039
ALA 1390.0042
ALA 1400.0041
GLN 1410.0042
THR 1420.0047
THR 1430.0048
LYS 1440.0045
HIS 1450.0049
LYS 1460.0053
TRP 1470.0052
GLU 1480.0051
ALA 1490.0056
ALA 1500.0058
HIS 1510.0056
VAL 1520.0055
ALA 1530.0051
GLU 1540.0055
GLN 1550.0058
LEU 1560.0054
ARG 1570.0053
ALA 1580.0059
TYR 1590.0059
LEU 1600.0054
GLU 1610.0056
GLY 1620.0061
THR 1630.0063
CYS 1640.0058
VAL 1650.0059
GLU 1660.0064
TRP 1670.0064
LEU 1680.0060
ARG 1690.0064
ARG 1700.0068
TYR 1710.0064
LEU 1720.0063
GLU 1730.0069
ASN 1740.0070
GLY 1750.0066
LYS 1760.0066
GLU 1770.0066
THR 1780.0061
LEU 1790.0059
GLN 1800.0061
ARG 1810.0060
THR 1820.0056
ASP 1830.0054
ALA 1840.0052
PRO 1850.0048
LYS 1860.0049
THR 1870.0045
HIS 1880.0044
MET 1890.0039
THR 1900.0036
HIS 1910.0034
HIS 1920.0029
ALA 1930.0028
VAL 1940.0022
SER 1950.0024
ASP 1960.0029
HIS 1970.0030
GLU 1980.0027
ALA 1990.0028
THR 2000.0027
LEU 2010.0031
ARG 2020.0032
CYS 2030.0036
TRP 2040.0038
ALA 2050.0041
LEU 2060.0044
SER 2070.0048
PHE 2080.0048
TYR 2090.0049
PRO 2100.0048
ALA 2110.0043
GLU 2120.0041
ILE 2130.0039
THR 2140.0036
LEU 2150.0034
THR 2160.0032
TRP 2170.0032
GLN 2180.0034
ARG 2190.0035
ASP 2200.0040
GLY 2210.0039
GLU 2220.0033
ASP 2230.0030
GLN 2240.0026
THR 2250.0022
GLN 2260.0018
ASP 2270.0020
THR 2280.0023
GLU 2290.0021
LEU 2300.0025
VAL 2310.0026
GLU 2320.0029
THR 2330.0034
ARG 2340.0036
PRO 2350.0042
ALA 2360.0044
GLY 2370.0048
ASP 2380.0052
GLY 2390.0052
THR 2400.0049
PHE 2410.0043
GLN 2420.0039
LYS 2430.0035
TRP 2440.0032
ALA 2450.0029
ALA 2460.0027
VAL 2470.0026
VAL 2480.0024
VAL 2490.0029
PRO 2500.0031
SER 2510.0035
GLY 2520.0040
GLN 2530.0038
GLU 2540.0038
GLN 2550.0043
ARG 2560.0041
TYR 2570.0038
THR 2580.0040
CYS 2590.0039
HIS 2600.0040
VAL 2610.0041
GLN 2620.0043
HIS 2630.0046
GLU 2640.0050
GLY 2650.0053
LEU 2660.0052
PRO 2670.0056
LYS 2680.0052
PRO 2690.0047
LEU 2700.0047
THR 2710.0046
LEU 2720.0046
ARG 2730.0046
TRP 2740.0043
GLU 2750.0048
PRO 2760.0053
GLN 2780.0022
ARG 2790.0023
THR 2800.0023
PRO 2810.0025
LYS 2820.0024
ILE 2830.0026
GLN 2840.0028
VAL 2850.0031
TYR 2860.0035
SER 2870.0040
ARG 2880.0045
HIS 2890.0047
PRO 2900.0045
ALA 2910.0043
GLU 2920.0047
ASN 2930.0045
GLY 2940.0049
LYS 2950.0052
SER 2960.0052
ASN 2970.0049
PHE 2980.0046
LEU 2990.0041
ASN 3000.0039
CYS 3010.0035
TYR 3020.0034
VAL 3030.0031
SER 3040.0030
GLY 3050.0027
PHE 3060.0028
HIS 3070.0031
PRO 3080.0034
SER 3090.0037
ASP 3100.0038
ILE 3110.0036
GLU 3120.0036
VAL 3130.0035
ASP 3140.0036
LEU 3150.0036
LEU 3160.0033
LYS 3170.0034
ASN 3180.0030
GLY 3190.0028
GLU 3200.0033
ARG 3210.0037
ILE 3220.0041
GLU 3230.0046
LYS 3240.0050
VAL 3250.0046
GLU 3260.0048
HIS 3270.0046
SER 3280.0046
ASP 3290.0047
LEU 3300.0044
SER 3310.0042
PHE 3320.0038
SER 3330.0035
LYS 3340.0033
ASP 3350.0029
TRP 3360.0033
SER 3370.0031
PHE 3380.0035
TYR 3390.0035
LEU 3400.0039
LEU 3410.0040
TYR 3420.0041
TYR 3430.0044
THR 3440.0046
GLU 3450.0049
PHE 3460.0046
THR 3470.0046
PRO 3480.0042
THR 3490.0041
GLU 3500.0037
LYS 3510.0033
ASP 3520.0033
GLU 3530.0030
TYR 3540.0031
ALA 3550.0028
CYS 3560.0030
ARG 3570.0028
VAL 3580.0029
ASN 3590.0030
HIS 3600.0030
VAL 3610.0031
THR 3620.0025
LEU 3630.0023
SER 3640.0023
GLN 3650.0025
PRO 3660.0026
LYS 3670.0022
ILE 3680.0022
VAL 3690.0022
LYS 3700.0024
TRP 3710.0028
ASP 3720.0028
ARG 3730.0034
ASP 3740.0033
MET 3750.0030
SER 10.0019
GLN 20.0020
PHE 30.0021
ARG 40.0025
VAL 50.0023
SER 60.0025
PRO 70.0026
LEU 80.0025
ASP 90.0029
ARG 100.0026
THR 110.0022
TRP 120.0020
ASN 130.0018
LEU 140.0013
GLY 150.0015
GLU 160.0019
THR 170.0021
VAL 180.0020
GLU 190.0023
LEU 200.0021
LYS 210.0024
CYS 220.0023
GLN 230.0026
VAL 240.0024
LEU 250.0026
LEU 260.0023
SER 270.0027
ASN 280.0025
PRO 290.0023
THR 300.0023
SER 310.0023
GLY 320.0024
CYS 330.0020
SER 340.0016
TRP 350.0014
LEU 360.0008
PHE 370.0005
GLN 380.0003
PRO 390.0006
ARG 400.0012
GLY 410.0014
ALA 420.0018
ALA 430.0016
ALA 440.0011
SER 450.0008
PRO 460.0004
THR 470.0007
PHE 480.0011
LEU 490.0013
LEU 500.0018
TYR 510.0021
LEU 520.0025
SER 530.0029
GLN 540.0034
ASN 550.0035
LYS 560.0034
PRO 570.0028
LYS 580.0026
ALA 590.0022
ALA 600.0019
GLU 610.0022
GLY 620.0021
LEU 630.0018
ASP 640.0019
THR 650.0023
GLN 660.0024
ARG 670.0019
PHE 680.0019
SER 690.0024
GLY 700.0025
LYS 710.0029
ARG 720.0031
LEU 730.0035
GLY 740.0035
ASP 750.0031
THR 760.0029
PHE 770.0026
VAL 780.0025
LEU 790.0021
THR 800.0022
LEU 810.0018
SER 820.0019
ASP 830.0015
PHE 840.0012
ARG 850.0007
ARG 860.0006
GLU 870.0002
ASN 880.0005
GLU 890.0008
GLY 900.0008
TYR 910.0010
TYR 920.0010
PHE 930.0012
CYS 940.0014
SER 950.0012
ALA 960.0016
LEU 970.0016
SER 980.0017
ASN 990.0016
SER 1000.0013
ILE 1010.0010
MET 1020.0009
TYR 1030.0010
PHE 1040.0010
SER 1050.0015
HIS 1060.0016
PHE 1070.0014
VAL 1080.0017
PRO 1090.0016
VAL 1100.0015
PHE 1110.0015
LEU 1120.0017
PRO 1130.0023
ALA 1140.0025
SER 10.0020
GLN 20.0022
PHE 30.0022
ARG 40.0025
VAL 50.0024
SER 60.0027
PRO 70.0029
LEU 80.0029
ASP 90.0033
ARG 100.0033
THR 110.0033
TRP 120.0032
ASN 130.0035
LEU 140.0034
GLY 150.0032
GLU 160.0032
THR 170.0028
VAL 180.0025
GLU 190.0024
LEU 200.0022
LYS 210.0023
CYS 220.0022
GLN 230.0025
VAL 240.0024
LEU 250.0028
LEU 260.0027
SER 270.0032
ASN 280.0031
PRO 290.0028
THR 300.0027
SER 310.0023
GLY 320.0019
CYS 330.0015
SER 340.0010
TRP 350.0009
LEU 360.0006
PHE 370.0009
GLN 380.0011
PRO 390.0016
ARG 400.0020
GLY 410.0020
ALA 420.0018
ALA 430.0016
ALA 440.0014
SER 450.0010
PRO 460.0006
THR 470.0006
PHE 480.0002
LEU 490.0004
LEU 500.0006
TYR 510.0010
LEU 520.0014
SER 530.0019
GLN 540.0023
ASN 550.0019
LYS 560.0014
PRO 570.0011
LYS 580.0007
ALA 590.0002
ALA 600.0004
GLU 610.0008
GLY 620.0010
LEU 630.0008
ASP 640.0011
THR 650.0009
GLN 660.0013
ARG 670.0016
PHE 680.0013
SER 690.0013
GLY 700.0015
LYS 710.0019
ARG 720.0023
LEU 730.0028
GLY 740.0031
ASP 750.0029
THR 760.0026
PHE 770.0021
VAL 780.0021
LEU 790.0017
THR 800.0019
LEU 810.0019
SER 820.0023
ASP 830.0026
PHE 840.0026
ARG 850.0027
ARG 860.0029
GLU 870.0024
ASN 880.0021
GLU 890.0023
GLY 900.0019
TYR 910.0016
TYR 920.0014
PHE 930.0012
CYS 940.0012
SER 950.0011
ALA 960.0016
LEU 970.0019
SER 980.0024
ASN 990.0027
SER 1000.0024
ILE 1010.0020
MET 1020.0015
TYR 1030.0014
PHE 1040.0011
SER 1050.0015
HIS 1060.0016
PHE 1070.0016
VAL 1080.0020
PRO 1090.0022
VAL 1100.0023
PHE 1110.0027
LEU 1120.0033
PRO 1130.0037
ALA 1140.0039

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elNémo is maintained by Yves-Henri Sanejouand.
It was developed by Karsten Suhre.
Between 2003 and 2014, it was hosted by IGS (Marseille).
Between 2015 and 2025, it was hosted by US2B (Nantes).
Last modification: april 24th, 2026.