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***  MHC1  ***

<R2> analysis for 2607180828532135053

---  normal mode 16  ---

This page gives a visualization of the normalized mean square displacement <R2> of all C-alpha atoms in the protein that are associated to this mode (black bars). The three components of the corresponding eigenvector are shown on the left (colored bars). Here is the raw data for <R2> and for the eigenvector (shift-click on the links for download).

XYZresidue<R2><R2>max = 0.1298
MET 10.1298
SER 20.1112
THR 30.1007
ILE 40.0805
THR 50.0699
LYS 60.0567
ASP 70.0430
GLN 80.0492
ILE 90.0435
LEU 100.0272
GLU 110.0283
GLY 120.0327
VAL 130.0196
ALA 140.0160
ALA 150.0281
LEU 160.0196
SER 170.0195
VAL 180.0173
MET 190.0151
GLU 200.0125
ILE 210.0128
VAL 220.0173
GLU 230.0169
LEU 240.0219
ILE 250.0268
SER 260.0304
ALA 270.0338
MET 280.0374
GLU 290.0420
GLU 300.0461
LYS 310.0498
PHE 320.0515
GLY 330.0549
VAL 340.0501
SER 350.0450
ALA 360.0425
ALA 370.0447
ALA 380.0475
VAL 390.0472
ALA 400.0480
ALA 410.0502
GLY 420.0556
PRO 430.0531
ALA 440.0482
ALA 450.0412
ALA 460.0366
VAL 470.0314
GLU 480.0250
ALA 490.0195
ALA 500.0148
GLU 510.0093
GLU 520.0076
GLN 530.0047
THR 540.0039
GLU 550.0019
PHE 560.0012
ASP 570.0013
VAL 580.0019
VAL 590.0026
LEU 600.0037
ALA 610.0038
SER 620.0047
PHE 630.0054
GLY 640.0061
GLU 650.0070
ASN 660.0069
LYS 670.0065
VAL 680.0068
ALA 690.0063
VAL 700.0054
ILE 710.0056
LYS 720.0057
ALA 730.0048
VAL 740.0043
ARG 750.0048
GLY 760.0043
ALA 770.0034
THR 780.0035
GLY 790.0043
LEU 800.0049
GLY 810.0059
LEU 820.0064
LYS 830.0066
GLU 840.0056
ALA 850.0052
LYS 860.0059
ASP 870.0055
LEU 880.0046
VAL 890.0050
GLU 900.0054
SER 910.0046
ALA 920.0042
PRO 930.0036
ALA 940.0034
VAL 950.0028
LEU 960.0031
LYS 970.0023
GLU 980.0019
GLY 990.0017
VAL 1000.0012
ASN 1010.0014
LYS 1020.0019
ASP 1030.0020
GLU 1040.0013
ALA 1050.0017
GLU 1060.0025
THR 1070.0025
LEU 1080.0026
LYS 1090.0032
LYS 1100.0039
SER 1110.0040
LEU 1120.0042
GLU 1130.0048
GLU 1140.0053
ALA 1150.0055
GLY 1160.0057
ALA 1170.0050
SER 1180.0046
VAL 1190.0036
GLU 1200.0029
ILE 1210.0020
LYS 1220.0017
GLU 1230.0012
ALA 1240.0015
ALA 1250.0016
ALA 1260.0019
LYS 1270.0020
ALA 1280.0020
TYR 1290.0020
LYS 1300.0022
ILE 1310.0022
ILE 1320.0026
SER 1330.0030
LEU 1340.0035
LYS 1350.0039
TYR 1360.0043
THR 1370.0050
ARG 1380.0055
LYS 1390.0062
VAL 1400.0067
CYS 1410.0076
ILE 1420.0082
GLY 1430.0089
PRO 1440.0097
GLY 1450.0105
PRO 1460.0110
GLY 1470.0111
LYS 1480.0106
ALA 1490.0100
TYR 1500.0092
LYS 1510.0085
ILE 1520.0078
ILE 1530.0071
SER 1540.0064
LEU 1550.0056
LYS 1560.0050
TYR 1570.0043
THR 1580.0036
ARG 1590.0029
LYS 1600.0024
VAL 1610.0021
CYS 1620.0018
GLY 1630.0023
PRO 1640.0033
GLY 1650.0037
PRO 1660.0053
GLY 1670.0058
GLY 1680.0051
LYS 1690.0044
ALA 1700.0033
TYR 1710.0024
LYS 1720.0023
ILE 1730.0021
ILE 1740.0029
SER 1750.0034
LEU 1760.0043
LYS 1770.0049
TYR 1780.0057
THR 1790.0065
ARG 1800.0073
LYS 1810.0080
VAL 1820.0088
GLY 1830.0093
PRO 1840.0099
GLY 1850.0095
PRO 1860.0090
GLY 1870.0084
ILE 1880.0076
ILE 1890.0070
SER 1900.0063
LEU 1910.0056
LYS 1920.0050
TYR 1930.0045
THR 1940.0039
ARG 1950.0033
LYS 1960.0027
VAL 1970.0026
CYS 1980.0023
ILE 1990.0024
GLN 2000.0022
LEU 2010.0021
GLY 2020.0020
GLY 2030.0019
PRO 2040.0020
GLY 2050.0021
PRO 2060.0017
GLY 2070.0016
ASN 2080.0018
ILE 2090.0018
LYS 2100.0016
THR 2110.0018
ALA 2120.0021
PHE 2130.0019
HIS 2140.0017
CYS 2150.0020
TYR 2160.0023
ALA 2170.0017
ALA 2180.0018
TYR 2190.0025
MET 2200.0023
THR 2210.0018
SER 2220.0023
ILE 2230.0028
LYS 2240.0028
ALA 2250.0032
CYS 2260.0051
ASP 2270.0067
LEU 2280.0076
LYS 2290.0091
LYS 2300.0102
PRO 2310.0091
LEU 2320.0101
MET 2330.0094
GLU 2340.0104
SER 2350.0112
GLY 2360.0102
TRP 2370.0084
SER 2380.0079
ASP 2390.0064
THR 2400.0064
ALA 2410.0060
HIS 2420.0063
GLY 2430.0072
LYS 2440.0098
LYS 2450.0114
SER 2460.0123
LEU 2470.0112
PRO 2480.0127
SER 2490.0122
SER 2500.0113
SER 2510.0097
SER 2520.0077
TYR 2530.0063
SER 2540.0056
TYR 2550.0037
ARG 2560.0033
ARG 2570.0021
LYS 2580.0024
LEU 2590.0044
THR 2600.0054
ASN 2610.0076
PRO 2620.0090
ALA 2630.0094
ASN 2640.0071
LYS 2650.0072
GLU 2660.0055
GLU 2670.0068
SER 2680.0062
ILE 2690.0067
LYS 2700.0081
LYS 2710.0073
GLN 2720.0074
LYS 2730.0077
TYR 2740.0065
SER 2750.0075
TYR 2760.0056
PRO 2770.0058
TRP 2780.0034
GLN 2790.0039
THR 2800.0049
SER 2810.0022
LYS 2820.0030
CYS 2830.0057
PHE 2840.0128
ASP 2880.0184
TYR 2890.0238
GLN 2900.0248
TYR 2910.0243
CYS 2970.0345
ASN 2980.0335
PRO 2990.0306
GLY 3000.0319
LYS 3010.0290
LYS 3020.0257
ASN 3030.0221
THR 3040.0211
ILE 3050.0172
SER 3060.0153
GLY 3070.0134
TYR 3080.0106
LYS 3090.0111
ARG 3100.0121
MET 3110.0092
MET 3120.0080
ALA 3130.0099
THR 3140.0092
LYS 3150.0066
ASP 3160.0067
SER 3170.0067
PHE 3180.0053
GLN 3190.0039
SER 3200.0028
PHE 3210.0013
ASN 3220.0010
LEU 3230.0007
THR 3240.0005
GLU 3250.0011
PRO 3260.0014
HIS 3270.0020
ILE 3280.0024
THR 3290.0030
THR 3300.0035
ASN 3310.0034
LYS 3320.0028
LEU 3330.0022
GLU 3340.0017
TRP 3350.0011
ILE 3360.0006
ASP 3370.0005
PRO 3380.0007
ASP 3390.0013
GLY 3400.0012
ASN 3410.0016
THR 3420.0012
ARG 3430.0013
GLY 3440.0011
GLY 3450.0016
GLY 3460.0011
GLY 10.0020
SER 20.0018
HIS 30.0019
SER 40.0018
MET 50.0020
ARG 60.0018
TYR 70.0020
PHE 80.0019
PHE 90.0021
THR 100.0022
SER 110.0024
VAL 120.0024
SER 130.0026
ARG 140.0028
PRO 150.0029
GLY 160.0032
ARG 170.0031
GLY 180.0031
GLU 190.0030
PRO 200.0028
ARG 210.0028
PHE 220.0026
ILE 230.0024
ALA 240.0023
VAL 250.0021
GLY 260.0022
TYR 270.0019
VAL 280.0020
ASP 290.0016
ASP 300.0015
THR 310.0018
GLN 320.0020
PHE 330.0023
VAL 340.0025
ARG 350.0026
PHE 360.0027
ASP 370.0028
SER 380.0030
ASP 390.0031
ALA 400.0031
ALA 410.0035
SER 420.0035
GLN 430.0034
ARG 440.0033
MET 450.0030
GLU 460.0030
PRO 470.0028
ARG 480.0025
ALA 490.0025
PRO 500.0027
TRP 510.0028
ILE 520.0029
GLU 530.0031
GLN 540.0034
GLU 550.0034
GLY 560.0037
PRO 570.0038
GLU 580.0038
TYR 590.0035
TRP 600.0034
ASP 610.0036
GLY 620.0034
GLU 630.0031
THR 640.0033
ARG 650.0034
LYS 660.0030
VAL 670.0028
LYS 680.0031
ALA 690.0030
HIS 700.0027
SER 710.0028
GLN 720.0029
THR 730.0027
HIS 740.0025
ARG 750.0028
VAL 760.0026
ASP 770.0023
LEU 780.0024
GLY 790.0026
THR 800.0024
LEU 810.0022
ARG 820.0022
GLY 830.0023
TYR 840.0023
TYR 850.0022
ASN 860.0021
GLN 870.0021
SER 880.0019
GLU 890.0018
ALA 900.0018
GLY 910.0025
SER 920.0024
HIS 930.0023
THR 940.0022
VAL 950.0021
GLN 960.0019
ARG 970.0019
MET 980.0017
TYR 990.0018
GLY 1000.0018
CYS 1010.0018
ASP 1020.0017
VAL 1030.0020
GLY 1040.0020
SER 1050.0023
ASP 1060.0025
TRP 1070.0024
ARG 1080.0024
PHE 1090.0021
LEU 1100.0018
ARG 1110.0016
GLY 1120.0016
TYR 1130.0015
HIS 1140.0016
GLN 1150.0015
TYR 1160.0017
ALA 1170.0018
TYR 1180.0019
ASP 1190.0020
GLY 1200.0017
LYS 1210.0016
ASP 1220.0015
TYR 1230.0017
ILE 1240.0016
ALA 1250.0015
LEU 1260.0015
LYS 1270.0012
GLU 1280.0012
ASP 1290.0013
LEU 1300.0016
ARG 1310.0016
SER 1320.0015
TRP 1330.0015
THR 1340.0013
ALA 1350.0015
ALA 1360.0015
ASP 1370.0018
MET 1380.0021
ALA 1390.0022
ALA 1400.0020
GLN 1410.0020
THR 1420.0023
THR 1430.0022
LYS 1440.0020
HIS 1450.0022
LYS 1460.0024
TRP 1470.0023
GLU 1480.0021
ALA 1490.0024
ALA 1500.0026
HIS 1510.0024
VAL 1520.0023
ALA 1530.0020
GLU 1540.0022
GLN 1550.0025
LEU 1560.0022
ARG 1570.0021
ALA 1580.0025
TYR 1590.0025
LEU 1600.0022
GLU 1610.0023
GLY 1620.0026
THR 1630.0028
CYS 1640.0024
VAL 1650.0025
GLU 1660.0028
TRP 1670.0028
LEU 1680.0025
ARG 1690.0027
ARG 1700.0030
TYR 1710.0027
LEU 1720.0026
GLU 1730.0030
ASN 1740.0030
GLY 1750.0027
LYS 1760.0027
GLU 1770.0026
THR 1780.0023
LEU 1790.0022
GLN 1800.0023
ARG 1810.0023
THR 1820.0020
ASP 1830.0018
ALA 1840.0017
PRO 1850.0013
LYS 1860.0013
THR 1870.0012
HIS 1880.0011
MET 1890.0011
THR 1900.0010
HIS 1910.0015
HIS 1920.0016
ALA 1930.0022
VAL 1940.0024
SER 1950.0028
ASP 1960.0031
HIS 1970.0032
GLU 1980.0028
ALA 1990.0023
THR 2000.0018
LEU 2010.0016
ARG 2020.0011
CYS 2030.0010
TRP 2040.0007
ALA 2050.0008
LEU 2060.0008
SER 2070.0012
PHE 2080.0013
TYR 2090.0015
PRO 2100.0014
ALA 2110.0010
GLU 2120.0010
ILE 2130.0009
THR 2140.0009
LEU 2150.0010
THR 2160.0013
TRP 2170.0017
GLN 2180.0021
ARG 2190.0026
ASP 2200.0030
GLY 2210.0027
GLU 2220.0025
ASP 2230.0021
GLN 2240.0020
THR 2250.0017
GLN 2260.0019
ASP 2270.0020
THR 2280.0015
GLU 2290.0012
LEU 2300.0007
VAL 2310.0006
GLU 2320.0006
THR 2330.0005
ARG 2340.0008
PRO 2350.0012
ALA 2360.0012
GLY 2370.0017
ASP 2380.0018
GLY 2390.0018
THR 2400.0014
PHE 2410.0010
GLN 2420.0006
LYS 2430.0003
TRP 2440.0005
ALA 2450.0009
ALA 2460.0013
VAL 2470.0018
VAL 2480.0021
VAL 2490.0025
PRO 2500.0029
SER 2510.0030
GLY 2520.0032
GLN 2530.0030
GLU 2540.0026
GLN 2550.0028
ARG 2560.0028
TYR 2570.0023
THR 2580.0021
CYS 2590.0017
HIS 2600.0017
VAL 2610.0014
GLN 2620.0015
HIS 2630.0015
GLU 2640.0018
GLY 2650.0019
LEU 2660.0020
PRO 2670.0025
LYS 2680.0024
PRO 2690.0021
LEU 2700.0020
THR 2710.0022
LEU 2720.0020
ARG 2730.0023
TRP 2740.0021
GLU 2750.0025
PRO 2760.0028
GLN 2780.0021
ARG 2790.0018
THR 2800.0020
PRO 2810.0018
LYS 2820.0015
ILE 2830.0016
GLN 2840.0013
VAL 2850.0015
TYR 2860.0012
SER 2870.0013
ARG 2880.0013
HIS 2890.0012
PRO 2900.0009
ALA 2910.0010
GLU 2920.0011
ASN 2930.0014
GLY 2940.0018
LYS 2950.0018
SER 2960.0021
ASN 2970.0018
PHE 2980.0019
LEU 2990.0018
ASN 3000.0017
CYS 3010.0017
TYR 3020.0015
VAL 3030.0016
SER 3040.0014
GLY 3050.0013
PHE 3060.0017
HIS 3070.0019
PRO 3080.0021
SER 3090.0022
ASP 3100.0026
ILE 3110.0026
GLU 3120.0028
VAL 3130.0026
ASP 3140.0028
LEU 3150.0025
LEU 3160.0027
LYS 3170.0027
ASN 3180.0028
GLY 3190.0030
GLU 3200.0033
ARG 3210.0032
ILE 3220.0031
GLU 3230.0034
LYS 3240.0033
VAL 3250.0028
GLU 3260.0027
HIS 3270.0023
SER 3280.0021
ASP 3290.0022
LEU 3300.0021
SER 3310.0018
PHE 3320.0015
SER 3330.0012
LYS 3340.0010
ASP 3350.0011
TRP 3360.0014
SER 3370.0014
PHE 3380.0016
TYR 3390.0015
LEU 3400.0018
LEU 3410.0018
TYR 3420.0021
TYR 3430.0021
THR 3440.0024
GLU 3450.0024
PHE 3460.0022
THR 3470.0021
PRO 3480.0017
THR 3490.0017
GLU 3500.0016
LYS 3510.0020
ASP 3520.0022
GLU 3530.0022
TYR 3540.0021
ALA 3550.0022
CYS 3560.0023
ARG 3570.0027
VAL 3580.0026
ASN 3590.0029
HIS 3600.0027
VAL 3610.0028
THR 3620.0026
LEU 3630.0029
SER 3640.0035
GLN 3650.0036
PRO 3660.0033
LYS 3670.0029
ILE 3680.0026
VAL 3690.0021
LYS 3700.0020
TRP 3710.0016
ASP 3720.0013
ARG 3730.0009
ASP 3740.0007
MET 3750.0008
SER 10.0013
GLN 20.0009
PHE 30.0007
ARG 40.0008
VAL 50.0006
SER 60.0006
PRO 70.0007
LEU 80.0010
ASP 90.0012
ARG 100.0009
THR 110.0007
TRP 120.0004
ASN 130.0004
LEU 140.0008
GLY 150.0012
GLU 160.0009
THR 170.0011
VAL 180.0007
GLU 190.0007
LEU 200.0004
LYS 210.0004
CYS 220.0003
GLN 230.0004
VAL 240.0003
LEU 250.0006
LEU 260.0006
SER 270.0005
ASN 280.0004
PRO 290.0006
THR 300.0010
SER 310.0012
GLY 320.0012
CYS 330.0010
SER 340.0013
TRP 350.0012
LEU 360.0015
PHE 370.0016
GLN 380.0019
PRO 390.0020
ARG 400.0022
GLY 410.0026
ALA 420.0031
ALA 430.0032
ALA 440.0028
SER 450.0028
PRO 460.0023
THR 470.0023
PHE 480.0021
LEU 490.0019
LEU 500.0018
TYR 510.0017
LEU 520.0015
SER 530.0015
GLN 540.0017
ASN 550.0022
LYS 560.0024
PRO 570.0021
LYS 580.0024
ALA 590.0024
ALA 600.0026
GLU 610.0031
GLY 620.0031
LEU 630.0026
ASP 640.0025
THR 650.0025
GLN 660.0025
ARG 670.0020
PHE 680.0018
SER 690.0018
GLY 700.0015
LYS 710.0015
ARG 720.0013
LEU 730.0013
GLY 740.0011
ASP 750.0007
THR 760.0007
PHE 770.0008
VAL 780.0009
LEU 790.0010
THR 800.0012
LEU 810.0013
SER 820.0015
ASP 830.0015
PHE 840.0011
ARG 850.0013
ARG 860.0015
GLU 870.0019
ASN 880.0015
GLU 890.0014
GLY 900.0015
TYR 910.0013
TYR 920.0010
PHE 930.0010
CYS 940.0009
SER 950.0012
ALA 960.0011
LEU 970.0012
SER 980.0011
ASN 990.0014
SER 1000.0018
ILE 1010.0017
MET 1020.0017
TYR 1030.0014
PHE 1040.0013
SER 1050.0010
HIS 1060.0012
PHE 1070.0012
VAL 1080.0008
PRO 1090.0010
VAL 1100.0008
PHE 1110.0009
LEU 1120.0008
PRO 1130.0011
ALA 1140.0017
SER 10.0037
GLN 20.0038
PHE 30.0040
ARG 40.0044
VAL 50.0043
SER 60.0047
PRO 70.0050
LEU 80.0048
ASP 90.0052
ARG 100.0053
THR 110.0052
TRP 120.0053
ASN 130.0055
LEU 140.0054
GLY 150.0055
GLU 160.0055
THR 170.0052
VAL 180.0048
GLU 190.0048
LEU 200.0044
LYS 210.0044
CYS 220.0042
GLN 230.0043
VAL 240.0040
LEU 250.0042
LEU 260.0039
SER 270.0042
ASN 280.0039
PRO 290.0038
THR 300.0036
SER 310.0030
GLY 320.0031
CYS 330.0031
SER 340.0028
TRP 350.0031
LEU 360.0028
PHE 370.0030
GLN 380.0028
PRO 390.0031
ARG 400.0033
GLY 410.0029
ALA 420.0024
ALA 430.0020
ALA 440.0023
SER 450.0019
PRO 460.0022
THR 470.0023
PHE 480.0024
LEU 490.0028
LEU 500.0029
TYR 510.0027
LEU 520.0031
SER 530.0031
GLN 540.0033
ASN 550.0030
LYS 560.0031
PRO 570.0030
LYS 580.0026
ALA 590.0027
ALA 600.0024
GLU 610.0023
GLY 620.0028
LEU 630.0031
ASP 640.0037
THR 650.0036
GLN 660.0042
ARG 670.0043
PHE 680.0039
SER 690.0039
GLY 700.0039
LYS 710.0040
ARG 720.0041
LEU 730.0046
GLY 740.0046
ASP 750.0044
THR 760.0044
PHE 770.0040
VAL 780.0042
LEU 790.0040
THR 800.0044
LEU 810.0044
SER 820.0048
ASP 830.0051
PHE 840.0048
ARG 850.0047
ARG 860.0046
GLU 870.0041
ASN 880.0040
GLU 890.0041
GLY 900.0037
TYR 910.0035
TYR 920.0035
PHE 930.0033
CYS 940.0032
SER 950.0028
ALA 960.0029
LEU 970.0027
SER 980.0030
ASN 990.0028
SER 1000.0023
ILE 1010.0025
MET 1020.0024
TYR 1030.0028
PHE 1040.0029
SER 1050.0034
HIS 1060.0035
PHE 1070.0035
VAL 1080.0040
PRO 1090.0041
VAL 1100.0043
PHE 1110.0045
LEU 1120.0050
PRO 1130.0054
ALA 1140.0053

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elNémo is maintained by Yves-Henri Sanejouand.
It was developed by Karsten Suhre.
Between 2003 and 2014, it was hosted by IGS (Marseille).
Between 2015 and 2025, it was hosted by US2B (Nantes).
Last modification: april 24th, 2026.