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***  MHC1  ***

<R2> analysis for 2607180828532135053

---  normal mode 17  ---

This page gives a visualization of the normalized mean square displacement <R2> of all C-alpha atoms in the protein that are associated to this mode (black bars). The three components of the corresponding eigenvector are shown on the left (colored bars). Here is the raw data for <R2> and for the eigenvector (shift-click on the links for download).

XYZresidue<R2><R2>max = 0.1026
MET 10.0304
SER 20.0261
THR 30.0238
ILE 40.0190
THR 50.0169
LYS 60.0138
ASP 70.0108
GLN 80.0118
ILE 90.0103
LEU 100.0066
GLU 110.0068
GLY 120.0075
VAL 130.0045
ALA 140.0036
ALA 150.0062
LEU 160.0043
SER 170.0041
VAL 180.0034
MET 190.0033
GLU 200.0027
ILE 210.0025
VAL 220.0031
GLU 230.0029
LEU 240.0038
ILE 250.0046
SER 260.0051
ALA 270.0058
MET 280.0065
GLU 290.0071
GLU 300.0079
LYS 310.0086
PHE 320.0087
GLY 330.0091
VAL 340.0080
SER 350.0070
ALA 360.0063
ALA 370.0063
ALA 380.0065
VAL 390.0063
ALA 400.0062
ALA 410.0063
GLY 420.0067
PRO 430.0061
ALA 440.0052
ALA 450.0045
ALA 460.0037
VAL 470.0031
GLU 480.0024
ALA 490.0015
ALA 500.0008
GLU 510.0004
GLU 520.0004
GLN 530.0005
THR 540.0005
GLU 550.0006
PHE 560.0004
ASP 570.0003
VAL 580.0002
VAL 590.0002
LEU 600.0003
ALA 610.0004
SER 620.0006
PHE 630.0007
GLY 640.0008
GLU 650.0010
ASN 660.0009
LYS 670.0008
VAL 680.0008
ALA 690.0007
VAL 700.0006
ILE 710.0006
LYS 720.0006
ALA 730.0005
VAL 740.0003
ARG 750.0003
GLY 760.0003
ALA 770.0002
THR 780.0001
GLY 790.0002
LEU 800.0003
GLY 810.0005
LEU 820.0006
LYS 830.0007
GLU 840.0005
ALA 850.0005
LYS 860.0006
ASP 870.0006
LEU 880.0004
VAL 890.0005
GLU 900.0006
SER 910.0005
ALA 920.0005
PRO 930.0004
ALA 940.0002
VAL 950.0001
LEU 960.0001
LYS 970.0001
GLU 980.0002
GLY 990.0004
VAL 1000.0004
ASN 1010.0005
LYS 1020.0006
ASP 1030.0006
GLU 1040.0004
ALA 1050.0004
GLU 1060.0006
THR 1070.0005
LEU 1080.0004
LYS 1090.0005
LYS 1100.0006
SER 1110.0006
LEU 1120.0005
GLU 1130.0007
GLU 1140.0008
ALA 1150.0007
GLY 1160.0008
ALA 1170.0006
SER 1180.0006
VAL 1190.0005
GLU 1200.0004
ILE 1210.0004
LYS 1220.0004
GLU 1230.0005
ALA 1240.0004
ALA 1250.0005
ALA 1260.0008
LYS 1270.0008
ALA 1280.0008
TYR 1290.0010
LYS 1300.0010
ILE 1310.0010
ILE 1320.0008
SER 1330.0008
LEU 1340.0009
LYS 1350.0011
TYR 1360.0012
THR 1370.0019
ARG 1380.0027
LYS 1390.0037
VAL 1400.0046
CYS 1410.0059
ILE 1420.0070
GLY 1430.0081
PRO 1440.0093
GLY 1450.0107
PRO 1460.0114
GLY 1470.0115
LYS 1480.0106
ALA 1490.0096
TYR 1500.0083
LYS 1510.0071
ILE 1520.0061
ILE 1530.0050
SER 1540.0040
LEU 1550.0029
LYS 1560.0021
TYR 1570.0016
THR 1580.0009
ARG 1590.0011
LYS 1600.0014
VAL 1610.0020
CYS 1620.0027
GLY 1630.0032
PRO 1640.0044
GLY 1650.0051
PRO 1660.0070
GLY 1670.0077
GLY 1680.0065
LYS 1690.0062
ALA 1700.0046
TYR 1710.0040
LYS 1720.0031
ILE 1730.0021
ILE 1740.0015
SER 1750.0007
LEU 1760.0015
LYS 1770.0022
TYR 1780.0032
THR 1790.0042
ARG 1800.0053
LYS 1810.0063
VAL 1820.0075
GLY 1830.0084
PRO 1840.0093
GLY 1850.0088
PRO 1860.0080
GLY 1870.0070
ILE 1880.0057
ILE 1890.0049
SER 1900.0037
LEU 1910.0028
LYS 1920.0021
TYR 1930.0016
THR 1940.0011
ARG 1950.0011
LYS 1960.0011
VAL 1970.0011
CYS 1980.0011
ILE 1990.0011
GLN 2000.0011
LEU 2010.0008
GLY 2020.0007
GLY 2030.0005
PRO 2040.0004
GLY 2050.0005
PRO 2060.0005
GLY 2070.0007
ASN 2080.0008
ILE 2090.0009
LYS 2100.0010
THR 2110.0010
ALA 2120.0011
PHE 2130.0012
HIS 2140.0013
CYS 2150.0013
TYR 2160.0014
ALA 2170.0017
ALA 2180.0017
TYR 2190.0015
MET 2200.0018
THR 2210.0020
SER 2220.0021
ILE 2230.0022
LYS 2240.0024
ALA 2250.0025
CYS 2260.0029
ASP 2270.0026
LEU 2280.0062
LYS 2290.0113
LYS 2300.0152
PRO 2310.0138
LEU 2320.0197
MET 2330.0223
GLU 2340.0279
SER 2350.0341
GLY 2360.0362
TRP 2370.0296
SER 2380.0315
ASP 2390.0266
THR 2400.0310
ALA 2410.0293
HIS 2420.0329
GLY 2430.0349
LYS 2440.0439
LYS 2450.0483
SER 2460.0503
LEU 2470.0463
PRO 2480.0515
SER 2490.0503
SER 2500.0475
SER 2510.0421
SER 2520.0341
TYR 2530.0286
SER 2540.0231
TYR 2550.0176
ARG 2560.0138
ARG 2570.0107
LYS 2580.0138
LEU 2590.0173
THR 2600.0253
ASN 2610.0307
PRO 2620.0398
ALA 2630.0414
ASN 2640.0362
LYS 2650.0298
GLU 2660.0203
GLU 2670.0162
SER 2680.0075
ILE 2690.0092
LYS 2700.0137
LYS 2710.0170
GLN 2720.0205
LYS 2730.0257
TYR 2740.0267
SER 2750.0334
TYR 2760.0298
PRO 2770.0284
TRP 2780.0240
GLN 2790.0249
THR 2800.0247
SER 2810.0177
LYS 2820.0151
CYS 2830.0332
PHE 2840.0696
ASP 2880.0841
TYR 2890.1026
GLN 2900.1002
TYR 2910.0893
CYS 2970.0288
ASN 2980.0279
PRO 2990.0254
GLY 3000.0266
LYS 3010.0239
LYS 3020.0211
ASN 3030.0179
THR 3040.0168
ILE 3050.0135
SER 3060.0119
GLY 3070.0105
TYR 3080.0080
LYS 3090.0083
ARG 3100.0093
MET 3110.0071
MET 3120.0059
ALA 3130.0074
THR 3140.0070
LYS 3150.0050
ASP 3160.0049
SER 3170.0051
PHE 3180.0044
GLN 3190.0035
SER 3200.0028
PHE 3210.0021
ASN 3220.0022
LEU 3230.0023
THR 3240.0024
GLU 3250.0024
PRO 3260.0023
HIS 3270.0023
ILE 3280.0021
THR 3290.0021
THR 3300.0020
ASN 3310.0020
LYS 3320.0022
LEU 3330.0022
GLU 3340.0023
TRP 3350.0024
ILE 3360.0025
ASP 3370.0025
PRO 3380.0025
ASP 3390.0025
GLY 3400.0026
ASN 3410.0026
THR 3420.0027
ARG 3430.0028
GLY 3440.0028
GLY 3450.0029
GLY 3460.0030
GLY 10.0004
SER 20.0004
HIS 30.0002
SER 40.0002
MET 50.0002
ARG 60.0002
TYR 70.0003
PHE 80.0003
PHE 90.0004
THR 100.0004
SER 110.0005
VAL 120.0004
SER 130.0005
ARG 140.0006
PRO 150.0006
GLY 160.0007
ARG 170.0008
GLY 180.0009
GLU 190.0009
PRO 200.0007
ARG 210.0006
PHE 220.0006
ILE 230.0005
ALA 240.0005
VAL 250.0004
GLY 260.0004
TYR 270.0002
VAL 280.0002
ASP 290.0002
ASP 300.0003
THR 310.0004
GLN 320.0004
PHE 330.0005
VAL 340.0006
ARG 350.0006
PHE 360.0007
ASP 370.0008
SER 380.0009
ASP 390.0009
ALA 400.0010
ALA 410.0012
SER 420.0012
GLN 430.0011
ARG 440.0011
MET 450.0009
GLU 460.0009
PRO 470.0008
ARG 480.0007
ALA 490.0007
PRO 500.0009
TRP 510.0008
ILE 520.0008
GLU 530.0010
GLN 540.0010
GLU 550.0010
GLY 560.0012
PRO 570.0013
GLU 580.0013
TYR 590.0011
TRP 600.0011
ASP 610.0012
GLY 620.0011
GLU 630.0010
THR 640.0011
ARG 650.0012
LYS 660.0010
VAL 670.0009
LYS 680.0010
ALA 690.0011
HIS 700.0009
SER 710.0008
GLN 720.0010
THR 730.0009
HIS 740.0008
ARG 750.0008
VAL 760.0009
ASP 770.0008
LEU 780.0007
GLY 790.0009
THR 800.0010
LEU 810.0008
ARG 820.0008
GLY 830.0010
TYR 840.0010
TYR 850.0009
ASN 860.0009
GLN 870.0008
SER 880.0007
GLU 890.0007
ALA 900.0006
GLY 910.0004
SER 920.0004
HIS 930.0004
THR 940.0004
VAL 950.0005
GLN 960.0004
ARG 970.0005
MET 980.0004
TYR 990.0005
GLY 1000.0004
CYS 1010.0004
ASP 1020.0004
VAL 1030.0004
GLY 1040.0004
SER 1050.0004
ASP 1060.0004
TRP 1070.0003
ARG 1080.0005
PHE 1090.0006
LEU 1100.0006
ARG 1110.0007
GLY 1120.0007
TYR 1130.0007
HIS 1140.0007
GLN 1150.0006
TYR 1160.0006
ALA 1170.0006
TYR 1180.0006
ASP 1190.0004
GLY 1200.0004
LYS 1210.0006
ASP 1220.0007
TYR 1230.0008
ILE 1240.0009
ALA 1250.0008
LEU 1260.0009
LYS 1270.0010
GLU 1280.0010
ASP 1290.0011
LEU 1300.0010
ARG 1310.0012
SER 1320.0012
TRP 1330.0011
THR 1340.0011
ALA 1350.0011
ALA 1360.0011
ASP 1370.0011
MET 1380.0012
ALA 1390.0011
ALA 1400.0010
GLN 1410.0012
THR 1420.0013
THR 1430.0011
LYS 1440.0012
HIS 1450.0014
LYS 1460.0013
TRP 1470.0012
GLU 1480.0014
ALA 1490.0015
ALA 1500.0014
HIS 1510.0014
VAL 1520.0012
ALA 1530.0011
GLU 1540.0012
GLN 1550.0011
LEU 1560.0010
ARG 1570.0010
ALA 1580.0010
TYR 1590.0009
LEU 1600.0007
GLU 1610.0008
GLY 1620.0008
THR 1630.0008
CYS 1640.0006
VAL 1650.0005
GLU 1660.0006
TRP 1670.0005
LEU 1680.0003
ARG 1690.0003
ARG 1700.0005
TYR 1710.0004
LEU 1720.0003
GLU 1730.0004
ASN 1740.0006
GLY 1750.0005
LYS 1760.0005
GLU 1770.0007
THR 1780.0006
LEU 1790.0004
GLN 1800.0004
ARG 1810.0006
THR 1820.0007
ASP 1830.0009
ALA 1840.0010
PRO 1850.0011
LYS 1860.0013
THR 1870.0014
HIS 1880.0016
MET 1890.0017
THR 1900.0018
HIS 1910.0020
HIS 1920.0020
ALA 1930.0021
VAL 1940.0020
SER 1950.0022
ASP 1960.0024
HIS 1970.0024
GLU 1980.0022
ALA 1990.0021
THR 2000.0019
LEU 2010.0018
ARG 2020.0016
CYS 2030.0015
TRP 2040.0014
ALA 2050.0012
LEU 2060.0012
SER 2070.0011
PHE 2080.0009
TYR 2090.0007
PRO 2100.0006
ALA 2110.0006
GLU 2120.0007
ILE 2130.0009
THR 2140.0011
LEU 2150.0012
THR 2160.0014
TRP 2170.0016
GLN 2180.0018
ARG 2190.0020
ASP 2200.0021
GLY 2210.0020
GLU 2220.0019
ASP 2230.0017
GLN 2240.0017
THR 2250.0015
GLN 2260.0016
ASP 2270.0016
THR 2280.0015
GLU 2290.0013
LEU 2300.0012
VAL 2310.0010
GLU 2320.0008
THR 2330.0008
ARG 2340.0008
PRO 2350.0008
ALA 2360.0010
GLY 2370.0009
ASP 2380.0010
GLY 2390.0008
THR 2400.0008
PHE 2410.0009
GLN 2420.0010
LYS 2430.0011
TRP 2440.0013
ALA 2450.0014
ALA 2460.0015
VAL 2470.0017
VAL 2480.0019
VAL 2490.0021
PRO 2500.0023
SER 2510.0024
GLY 2520.0025
GLN 2530.0024
GLU 2540.0022
GLN 2550.0023
ARG 2560.0022
TYR 2570.0020
THR 2580.0018
CYS 2590.0016
HIS 2600.0015
VAL 2610.0013
GLN 2620.0011
HIS 2630.0009
GLU 2640.0008
GLY 2650.0009
LEU 2660.0010
PRO 2670.0011
LYS 2680.0012
PRO 2690.0013
LEU 2700.0014
THR 2710.0016
LEU 2720.0017
ARG 2730.0019
TRP 2740.0020
GLU 2750.0022
PRO 2760.0022
GLN 2780.0005
ARG 2790.0004
THR 2800.0005
PRO 2810.0006
LYS 2820.0007
ILE 2830.0009
GLN 2840.0010
VAL 2850.0012
TYR 2860.0013
SER 2870.0013
ARG 2880.0013
HIS 2890.0014
PRO 2900.0016
ALA 2910.0017
GLU 2920.0019
ASN 2930.0021
GLY 2940.0021
LYS 2950.0020
SER 2960.0018
ASN 2970.0016
PHE 2980.0014
LEU 2990.0013
ASN 3000.0011
CYS 3010.0010
TYR 3020.0008
VAL 3030.0006
SER 3040.0005
GLY 3050.0005
PHE 3060.0003
HIS 3070.0002
PRO 3080.0000
SER 3090.0002
ASP 3100.0003
ILE 3110.0004
GLU 3120.0006
VAL 3130.0008
ASP 3140.0010
LEU 3150.0012
LEU 3160.0014
LYS 3170.0016
ASN 3180.0017
GLY 3190.0015
GLU 3200.0015
ARG 3210.0014
ILE 3220.0014
GLU 3230.0014
LYS 3240.0014
VAL 3250.0012
GLU 3260.0011
HIS 3270.0008
SER 3280.0007
ASP 3290.0005
LEU 3300.0004
SER 3310.0002
PHE 3320.0001
SER 3330.0002
LYS 3340.0004
ASP 3350.0005
TRP 3360.0003
SER 3370.0002
PHE 3380.0002
TYR 3390.0004
LEU 3400.0005
LEU 3410.0007
TYR 3420.0009
TYR 3430.0011
THR 3440.0013
GLU 3450.0015
PHE 3460.0016
THR 3470.0018
PRO 3480.0019
THR 3490.0021
GLU 3500.0021
LYS 3510.0021
ASP 3520.0019
GLU 3530.0018
TYR 3540.0015
ALA 3550.0013
CYS 3560.0011
ARG 3570.0010
VAL 3580.0008
ASN 3590.0006
HIS 3600.0004
VAL 3610.0002
THR 3620.0004
LEU 3630.0005
SER 3640.0005
GLN 3650.0007
PRO 3660.0008
LYS 3670.0009
ILE 3680.0011
VAL 3690.0012
LYS 3700.0014
TRP 3710.0015
ASP 3720.0016
ARG 3730.0017
ASP 3740.0018
MET 3750.0016
SER 10.0008
GLN 20.0008
PHE 30.0009
ARG 40.0009
VAL 50.0011
SER 60.0013
PRO 70.0014
LEU 80.0014
ASP 90.0015
ARG 100.0017
THR 110.0019
TRP 120.0020
ASN 130.0022
LEU 140.0023
GLY 150.0023
GLU 160.0021
THR 170.0020
VAL 180.0018
GLU 190.0016
LEU 200.0015
LYS 210.0013
CYS 220.0011
GLN 230.0009
VAL 240.0009
LEU 250.0007
LEU 260.0008
SER 270.0007
ASN 280.0009
PRO 290.0010
THR 300.0012
SER 310.0013
GLY 320.0013
CYS 330.0013
SER 340.0015
TRP 350.0016
LEU 360.0016
PHE 370.0018
GLN 380.0018
PRO 390.0020
ARG 400.0020
GLY 410.0022
ALA 420.0021
ALA 430.0021
ALA 440.0021
SER 450.0020
PRO 460.0019
THR 470.0020
PHE 480.0019
LEU 490.0019
LEU 500.0017
TYR 510.0016
LEU 520.0015
SER 530.0013
GLN 540.0013
ASN 550.0015
LYS 560.0016
PRO 570.0017
LYS 580.0018
ALA 590.0020
ALA 600.0021
GLU 610.0023
GLY 620.0024
LEU 630.0022
ASP 640.0023
THR 650.0021
GLN 660.0022
ARG 670.0021
PHE 680.0020
SER 690.0018
GLY 700.0016
LYS 710.0014
ARG 720.0012
LEU 730.0010
GLY 740.0009
ASP 750.0009
THR 760.0010
PHE 770.0012
VAL 780.0014
LEU 790.0016
THR 800.0017
LEU 810.0019
SER 820.0021
ASP 830.0022
PHE 840.0022
ARG 850.0023
ARG 860.0022
GLU 870.0022
ASN 880.0021
GLU 890.0020
GLY 900.0019
TYR 910.0017
TYR 920.0016
PHE 930.0014
CYS 940.0013
SER 950.0013
ALA 960.0012
LEU 970.0013
SER 980.0011
ASN 990.0012
SER 1000.0014
ILE 1010.0013
MET 1020.0013
TYR 1030.0012
PHE 1040.0012
SER 1050.0011
HIS 1060.0012
PHE 1070.0014
VAL 1080.0015
PRO 1090.0016
VAL 1100.0018
PHE 1110.0019
LEU 1120.0021
PRO 1130.0021
ALA 1140.0021
SER 10.0025
GLN 20.0024
PHE 30.0024
ARG 40.0025
VAL 50.0024
SER 60.0024
PRO 70.0024
LEU 80.0024
ASP 90.0025
ARG 100.0023
THR 110.0022
TRP 120.0020
ASN 130.0019
LEU 140.0016
GLY 150.0016
GLU 160.0018
THR 170.0019
VAL 180.0019
GLU 190.0021
LEU 200.0021
LYS 210.0023
CYS 220.0023
GLN 230.0024
VAL 240.0024
LEU 250.0026
LEU 260.0025
SER 270.0026
ASN 280.0024
PRO 290.0024
THR 300.0023
SER 310.0020
GLY 320.0020
CYS 330.0019
SER 340.0017
TRP 350.0017
LEU 360.0016
PHE 370.0016
GLN 380.0016
PRO 390.0015
ARG 400.0017
GLY 410.0017
ALA 420.0017
ALA 430.0015
ALA 440.0014
SER 450.0013
PRO 460.0014
THR 470.0013
PHE 480.0013
LEU 490.0014
LEU 500.0016
TYR 510.0017
LEU 520.0019
SER 530.0020
GLN 540.0021
ASN 550.0020
LYS 560.0019
PRO 570.0017
LYS 580.0015
ALA 590.0014
ALA 600.0012
GLU 610.0010
GLY 620.0010
LEU 630.0012
ASP 640.0012
THR 650.0014
GLN 660.0015
ARG 670.0015
PHE 680.0016
SER 690.0017
GLY 700.0019
LYS 710.0021
ARG 720.0022
LEU 730.0025
GLY 740.0026
ASP 750.0025
THR 760.0024
PHE 770.0022
VAL 780.0021
LEU 790.0019
THR 800.0019
LEU 810.0017
SER 820.0017
ASP 830.0016
PHE 840.0016
ARG 850.0014
ARG 860.0014
GLU 870.0013
ASN 880.0015
GLU 890.0016
GLY 900.0017
TYR 910.0018
TYR 920.0018
PHE 930.0019
CYS 940.0019
SER 950.0019
ALA 960.0020
LEU 970.0019
SER 980.0021
ASN 990.0020
SER 1000.0018
ILE 1010.0019
MET 1020.0019
TYR 1030.0020
PHE 1040.0020
SER 1050.0022
HIS 1060.0022
PHE 1070.0021
VAL 1080.0021
PRO 1090.0021
VAL 1100.0019
PHE 1110.0019
LEU 1120.0019
PRO 1130.0021
ALA 1140.0021

If you find results from this site helpful for your research, please cite one of our papers:

elNémo is maintained by Yves-Henri Sanejouand.
It was developed by Karsten Suhre.
Between 2003 and 2014, it was hosted by IGS (Marseille).
Between 2015 and 2025, it was hosted by US2B (Nantes).
Last modification: april 24th, 2026.