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***  MHC1  ***

<R2> analysis for 2607180828532135053

---  normal mode 18  ---

This page gives a visualization of the normalized mean square displacement <R2> of all C-alpha atoms in the protein that are associated to this mode (black bars). The three components of the corresponding eigenvector are shown on the left (colored bars). Here is the raw data for <R2> and for the eigenvector (shift-click on the links for download).

XYZresidue<R2><R2>max = 0.1398
MET 10.0425
SER 20.0361
THR 30.0319
ILE 40.0249
THR 50.0208
LYS 60.0156
ASP 70.0113
GLN 80.0146
ILE 90.0118
LEU 100.0055
GLU 110.0089
GLY 120.0104
VAL 130.0055
ALA 140.0069
ALA 150.0115
LEU 160.0084
SER 170.0090
VAL 180.0075
MET 190.0067
GLU 200.0054
ILE 210.0034
VAL 220.0030
GLU 230.0018
LEU 240.0024
ILE 250.0022
SER 260.0032
ALA 270.0043
MET 280.0051
GLU 290.0061
GLU 300.0074
LYS 310.0085
PHE 320.0086
GLY 330.0094
VAL 340.0079
SER 350.0069
ALA 360.0062
ALA 370.0070
ALA 380.0076
VAL 390.0071
ALA 400.0075
ALA 410.0079
GLY 420.0090
PRO 430.0087
ALA 440.0074
ALA 450.0061
ALA 460.0057
VAL 470.0049
GLU 480.0042
ALA 490.0040
ALA 500.0044
GLU 510.0045
GLU 520.0050
GLN 530.0048
THR 540.0053
GLU 550.0052
PHE 560.0050
ASP 570.0046
VAL 580.0048
VAL 590.0042
LEU 600.0042
ALA 610.0037
SER 620.0037
PHE 630.0041
GLY 640.0043
GLU 650.0044
ASN 660.0049
LYS 670.0046
VAL 680.0052
ALA 690.0057
VAL 700.0053
ILE 710.0052
LYS 720.0060
ALA 730.0061
VAL 740.0056
ARG 750.0061
GLY 760.0067
ALA 770.0064
THR 780.0061
GLY 790.0066
LEU 800.0060
GLY 810.0061
LEU 820.0058
LYS 830.0052
GLU 840.0050
ALA 850.0051
LYS 860.0045
ASP 870.0040
LEU 880.0041
VAL 890.0040
GLU 900.0033
SER 910.0030
ALA 920.0031
PRO 930.0030
ALA 940.0035
VAL 950.0040
LEU 960.0047
LYS 970.0050
GLU 980.0048
GLY 990.0051
VAL 1000.0057
ASN 1010.0061
LYS 1020.0062
ASP 1030.0069
GLU 1040.0066
ALA 1050.0060
GLU 1060.0064
THR 1070.0068
LEU 1080.0062
LYS 1090.0059
LYS 1100.0065
SER 1110.0065
LEU 1120.0058
GLU 1130.0058
GLU 1140.0064
ALA 1150.0059
GLY 1160.0054
ALA 1170.0049
SER 1180.0046
VAL 1190.0047
GLU 1200.0045
ILE 1210.0048
LYS 1220.0044
GLU 1230.0045
ALA 1240.0044
ALA 1250.0038
ALA 1260.0044
LYS 1270.0042
ALA 1280.0041
TYR 1290.0043
LYS 1300.0040
ILE 1310.0043
ILE 1320.0039
SER 1330.0040
LEU 1340.0036
LYS 1350.0036
TYR 1360.0034
THR 1370.0032
ARG 1380.0032
LYS 1390.0030
VAL 1400.0031
CYS 1410.0028
ILE 1420.0032
GLY 1430.0030
PRO 1440.0033
GLY 1450.0035
PRO 1460.0031
GLY 1470.0031
LYS 1480.0034
ALA 1490.0033
TYR 1500.0035
LYS 1510.0040
ILE 1520.0038
ILE 1530.0043
SER 1540.0042
LEU 1550.0047
LYS 1560.0047
TYR 1570.0050
THR 1580.0052
ARG 1590.0054
LYS 1600.0057
VAL 1610.0057
CYS 1620.0062
GLY 1630.0061
PRO 1640.0067
GLY 1650.0074
PRO 1660.0081
GLY 1670.0084
GLY 1680.0076
LYS 1690.0078
ALA 1700.0070
TYR 1710.0072
LYS 1720.0068
ILE 1730.0067
ILE 1740.0063
SER 1750.0062
LEU 1760.0059
LYS 1770.0056
TYR 1780.0054
THR 1790.0050
ARG 1800.0048
LYS 1810.0042
VAL 1820.0040
GLY 1830.0033
PRO 1840.0027
GLY 1850.0023
PRO 1860.0024
GLY 1870.0029
ILE 1880.0028
ILE 1890.0034
SER 1900.0034
LEU 1910.0038
LYS 1920.0038
TYR 1930.0041
THR 1940.0042
ARG 1950.0044
LYS 1960.0046
VAL 1970.0044
CYS 1980.0044
ILE 1990.0040
GLN 2000.0040
LEU 2010.0035
GLY 2020.0033
GLY 2030.0030
PRO 2040.0026
GLY 2050.0023
PRO 2060.0019
GLY 2070.0021
ASN 2080.0026
ILE 2090.0026
LYS 2100.0023
THR 2110.0026
ALA 2120.0029
PHE 2130.0027
HIS 2140.0026
CYS 2150.0030
TYR 2160.0028
ALA 2170.0029
ALA 2180.0029
TYR 2190.0028
MET 2200.0030
THR 2210.0030
SER 2220.0027
ILE 2230.0026
LYS 2240.0026
ALA 2250.0026
CYS 2260.0012
ASP 2270.0015
LEU 2280.0021
LYS 2290.0042
LYS 2300.0052
PRO 2310.0047
LEU 2320.0049
MET 2330.0039
GLU 2340.0043
SER 2350.0042
GLY 2360.0023
TRP 2370.0020
SER 2380.0018
ASP 2390.0024
THR 2400.0030
ALA 2410.0040
HIS 2420.0063
GLY 2430.0077
LYS 2440.0109
LYS 2450.0124
SER 2460.0129
LEU 2470.0110
PRO 2480.0119
SER 2490.0116
SER 2500.0091
SER 2510.0062
SER 2520.0044
TYR 2530.0043
SER 2540.0022
TYR 2550.0023
ARG 2560.0012
ARG 2570.0004
LYS 2580.0014
LEU 2590.0017
THR 2600.0025
ASN 2610.0036
PRO 2620.0034
ALA 2630.0055
ASN 2640.0055
LYS 2650.0064
GLU 2660.0057
GLU 2670.0058
SER 2680.0051
ILE 2690.0046
LYS 2700.0048
LYS 2710.0029
GLN 2720.0036
LYS 2730.0024
TYR 2740.0044
SER 2750.0046
TYR 2760.0066
PRO 2770.0057
TRP 2780.0074
GLN 2790.0068
THR 2800.0048
SER 2810.0047
LYS 2820.0044
CYS 2830.0043
PHE 2840.0035
ASP 2880.0114
TYR 2890.0216
GLN 2900.0283
TYR 2910.0306
CYS 2970.1398
ASN 2980.1340
PRO 2990.1192
GLY 3000.1240
LYS 3010.1101
LYS 3020.0932
ASN 3030.0775
THR 3040.0736
ILE 3050.0560
SER 3060.0481
GLY 3070.0399
TYR 3080.0284
LYS 3090.0294
ARG 3100.0330
MET 3110.0211
MET 3120.0169
ALA 3130.0249
THR 3140.0219
LYS 3150.0130
ASP 3160.0165
SER 3170.0127
PHE 3180.0078
GLN 3190.0061
SER 3200.0047
PHE 3210.0070
ASN 3220.0053
LEU 3230.0055
THR 3240.0056
GLU 3250.0057
PRO 3260.0057
HIS 3270.0062
ILE 3280.0059
THR 3290.0065
THR 3300.0064
ASN 3310.0069
LYS 3320.0070
LEU 3330.0065
GLU 3340.0069
TRP 3350.0066
ILE 3360.0069
ASP 3370.0070
PRO 3380.0067
ASP 3390.0072
GLY 3400.0083
ASN 3410.0083
THR 3420.0087
ARG 3430.0102
GLY 3440.0109
GLY 3450.0121
GLY 3460.0132
GLY 10.0025
SER 20.0021
HIS 30.0021
SER 40.0019
MET 50.0021
ARG 60.0019
TYR 70.0021
PHE 80.0018
PHE 90.0021
THR 100.0021
SER 110.0025
VAL 120.0025
SER 130.0030
ARG 140.0032
PRO 150.0036
GLY 160.0040
ARG 170.0038
GLY 180.0038
GLU 190.0037
PRO 200.0032
ARG 210.0028
PHE 220.0027
ILE 230.0023
ALA 240.0024
VAL 250.0022
GLY 260.0023
TYR 270.0021
VAL 280.0023
ASP 290.0019
ASP 300.0018
THR 310.0022
GLN 320.0022
PHE 330.0027
VAL 340.0028
ARG 350.0027
PHE 360.0029
ASP 370.0027
SER 380.0031
ASP 390.0030
ALA 400.0031
ALA 410.0036
SER 420.0038
GLN 430.0038
ARG 440.0038
MET 450.0034
GLU 460.0033
PRO 470.0033
ARG 480.0029
ALA 490.0031
PRO 500.0036
TRP 510.0037
ILE 520.0036
GLU 530.0040
GLN 540.0044
GLU 550.0043
GLY 560.0047
PRO 570.0048
GLU 580.0048
TYR 590.0043
TRP 600.0042
ASP 610.0045
GLY 620.0043
GLU 630.0038
THR 640.0039
ARG 650.0042
LYS 660.0038
VAL 670.0034
LYS 680.0037
ALA 690.0038
HIS 700.0033
SER 710.0032
GLN 720.0037
THR 730.0035
HIS 740.0031
ARG 750.0035
VAL 760.0037
ASP 770.0033
LEU 780.0033
GLY 790.0038
THR 800.0037
LEU 810.0033
ARG 820.0036
GLY 830.0039
TYR 840.0036
TYR 850.0036
ASN 860.0040
GLN 870.0038
SER 880.0040
GLU 890.0040
ALA 900.0038
GLY 910.0033
SER 920.0029
HIS 930.0027
THR 940.0023
VAL 950.0024
GLN 960.0019
ARG 970.0020
MET 980.0017
TYR 990.0019
GLY 1000.0019
CYS 1010.0019
ASP 1020.0017
VAL 1030.0020
GLY 1040.0021
SER 1050.0025
ASP 1060.0028
TRP 1070.0027
ARG 1080.0025
PHE 1090.0021
LEU 1100.0016
ARG 1110.0014
GLY 1120.0016
TYR 1130.0015
HIS 1140.0018
GLN 1150.0017
TYR 1160.0020
ALA 1170.0019
TYR 1180.0023
ASP 1190.0022
GLY 1200.0017
LYS 1210.0018
ASP 1220.0018
TYR 1230.0022
ILE 1240.0022
ALA 1250.0018
LEU 1260.0019
LYS 1270.0016
GLU 1280.0013
ASP 1290.0016
LEU 1300.0019
ARG 1310.0022
SER 1320.0022
TRP 1330.0022
THR 1340.0021
ALA 1350.0024
ALA 1360.0023
ASP 1370.0027
MET 1380.0031
ALA 1390.0032
ALA 1400.0028
GLN 1410.0031
THR 1420.0034
THR 1430.0031
LYS 1440.0029
HIS 1450.0034
LYS 1460.0036
TRP 1470.0032
GLU 1480.0033
ALA 1490.0038
ALA 1500.0037
HIS 1510.0034
VAL 1520.0031
ALA 1530.0027
GLU 1540.0030
GLN 1550.0031
LEU 1560.0027
ARG 1570.0025
ALA 1580.0029
TYR 1590.0029
LEU 1600.0024
GLU 1610.0025
GLY 1620.0030
THR 1630.0032
CYS 1640.0027
VAL 1650.0027
GLU 1660.0033
TRP 1670.0033
LEU 1680.0029
ARG 1690.0032
ARG 1700.0036
TYR 1710.0033
LEU 1720.0032
GLU 1730.0038
ASN 1740.0039
GLY 1750.0036
LYS 1760.0037
GLU 1770.0037
THR 1780.0033
LEU 1790.0030
GLN 1800.0032
ARG 1810.0032
THR 1820.0029
ASP 1830.0030
ALA 1840.0031
PRO 1850.0029
LYS 1860.0032
THR 1870.0032
HIS 1880.0034
MET 1890.0034
THR 1900.0035
HIS 1910.0037
HIS 1920.0036
ALA 1930.0039
VAL 1940.0037
SER 1950.0042
ASP 1960.0046
HIS 1970.0046
GLU 1980.0041
ALA 1990.0039
THR 2000.0034
LEU 2010.0034
ARG 2020.0030
CYS 2030.0029
TRP 2040.0027
ALA 2050.0026
LEU 2060.0026
SER 2070.0027
PHE 2080.0025
TYR 2090.0024
PRO 2100.0021
ALA 2110.0017
GLU 2120.0015
ILE 2130.0018
THR 2140.0019
LEU 2150.0022
THR 2160.0024
TRP 2170.0029
GLN 2180.0032
ARG 2190.0036
ASP 2200.0039
GLY 2210.0035
GLU 2220.0032
ASP 2230.0028
GLN 2240.0029
THR 2250.0024
GLN 2260.0026
ASP 2270.0028
THR 2280.0025
GLU 2290.0022
LEU 2300.0018
VAL 2310.0015
GLU 2320.0010
THR 2330.0013
ARG 2340.0013
PRO 2350.0016
ALA 2360.0020
GLY 2370.0021
ASP 2380.0026
GLY 2390.0025
THR 2400.0024
PHE 2410.0020
GLN 2420.0020
LYS 2430.0019
TRP 2440.0022
ALA 2450.0023
ALA 2460.0027
VAL 2470.0030
VAL 2480.0034
VAL 2490.0038
PRO 2500.0043
SER 2510.0046
GLY 2520.0049
GLN 2530.0046
GLU 2540.0043
GLN 2550.0045
ARG 2560.0042
TYR 2570.0038
THR 2580.0036
CYS 2590.0031
HIS 2600.0029
VAL 2610.0027
GLN 2620.0024
HIS 2630.0024
GLU 2640.0024
GLY 2650.0029
LEU 2660.0030
PRO 2670.0032
LYS 2680.0032
PRO 2690.0030
LEU 2700.0032
THR 2710.0035
LEU 2720.0037
ARG 2730.0040
TRP 2740.0041
GLU 2750.0046
PRO 2760.0047
GLN 2780.0020
ARG 2790.0014
THR 2800.0013
PRO 2810.0007
LYS 2820.0008
ILE 2830.0007
GLN 2840.0010
VAL 2850.0012
TYR 2860.0017
SER 2870.0021
ARG 2880.0024
HIS 2890.0029
PRO 2900.0031
ALA 2910.0031
GLU 2920.0035
ASN 2930.0034
GLY 2940.0036
LYS 2950.0036
SER 2960.0033
ASN 2970.0029
PHE 2980.0023
LEU 2990.0018
ASN 3000.0014
CYS 3010.0009
TYR 3020.0007
VAL 3030.0002
SER 3040.0002
GLY 3050.0005
PHE 3060.0008
HIS 3070.0013
PRO 3080.0016
SER 3090.0014
ASP 3100.0017
ILE 3110.0013
GLU 3120.0012
VAL 3130.0007
ASP 3140.0006
LEU 3150.0007
LEU 3160.0007
LYS 3170.0011
ASN 3180.0011
GLY 3190.0006
GLU 3200.0005
ARG 3210.0007
ILE 3220.0012
GLU 3230.0017
LYS 3240.0021
VAL 3250.0017
GLU 3260.0019
HIS 3270.0016
SER 3280.0016
ASP 3290.0018
LEU 3300.0015
SER 3310.0013
PHE 3320.0009
SER 3330.0005
LYS 3340.0005
ASP 3350.0007
TRP 3360.0010
SER 3370.0008
PHE 3380.0008
TYR 3390.0005
LEU 3400.0008
LEU 3410.0011
TYR 3420.0011
TYR 3430.0016
THR 3440.0019
GLU 3450.0024
PHE 3460.0024
THR 3470.0028
PRO 3480.0027
THR 3490.0029
GLU 3500.0030
LYS 3510.0026
ASP 3520.0021
GLU 3530.0018
TYR 3540.0014
ALA 3550.0010
CYS 3560.0005
ARG 3570.0003
VAL 3580.0006
ASN 3590.0012
HIS 3600.0015
VAL 3610.0020
THR 3620.0020
LEU 3630.0021
SER 3640.0027
GLN 3650.0023
PRO 3660.0015
LYS 3670.0013
ILE 3680.0010
VAL 3690.0011
LYS 3700.0014
TRP 3710.0017
ASP 3720.0023
ARG 3730.0026
ASP 3740.0030
MET 3750.0027
SER 10.0016
GLN 20.0012
PHE 30.0012
ARG 40.0013
VAL 50.0015
SER 60.0018
PRO 70.0021
LEU 80.0024
ASP 90.0027
ARG 100.0030
THR 110.0033
TRP 120.0034
ASN 130.0040
LEU 140.0042
GLY 150.0039
GLU 160.0033
THR 170.0027
VAL 180.0025
GLU 190.0020
LEU 200.0017
LYS 210.0013
CYS 220.0012
GLN 230.0008
VAL 240.0009
LEU 250.0007
LEU 260.0008
SER 270.0007
ASN 280.0011
PRO 290.0013
THR 300.0018
SER 310.0018
GLY 320.0016
CYS 330.0016
SER 340.0019
TRP 350.0020
LEU 360.0024
PHE 370.0027
GLN 380.0029
PRO 390.0032
ARG 400.0033
GLY 410.0037
ALA 420.0038
ALA 430.0037
ALA 440.0035
SER 450.0034
PRO 460.0031
THR 470.0030
PHE 480.0027
LEU 490.0025
LEU 500.0022
TYR 510.0020
LEU 520.0015
SER 530.0015
GLN 540.0015
ASN 550.0018
LYS 560.0019
PRO 570.0018
LYS 580.0023
ALA 590.0025
ALA 600.0029
GLU 610.0035
GLY 620.0036
LEU 630.0031
ASP 640.0030
THR 650.0025
GLN 660.0024
ARG 670.0025
PHE 680.0023
SER 690.0018
GLY 700.0014
LYS 710.0010
ARG 720.0008
LEU 730.0005
GLY 740.0006
ASP 750.0005
THR 760.0006
PHE 770.0010
VAL 780.0012
LEU 790.0017
THR 800.0018
LEU 810.0024
SER 820.0027
ASP 830.0033
PHE 840.0034
ARG 850.0039
ARG 860.0042
GLU 870.0040
ASN 880.0033
GLU 890.0034
GLY 900.0031
TYR 910.0027
TYR 920.0024
PHE 930.0021
CYS 940.0019
SER 950.0019
ALA 960.0017
LEU 970.0019
SER 980.0017
ASN 990.0020
SER 1000.0024
ILE 1010.0022
MET 1020.0022
TYR 1030.0019
PHE 1040.0020
SER 1050.0018
HIS 1060.0020
PHE 1070.0024
VAL 1080.0023
PRO 1090.0027
VAL 1100.0028
PHE 1110.0034
LEU 1120.0039
PRO 1130.0040
ALA 1140.0038
SER 10.0041
GLN 20.0041
PHE 30.0043
ARG 40.0046
VAL 50.0046
SER 60.0049
PRO 70.0050
LEU 80.0051
ASP 90.0054
ARG 100.0053
THR 110.0051
TRP 120.0050
ASN 130.0050
LEU 140.0047
GLY 150.0046
GLU 160.0048
THR 170.0046
VAL 180.0045
GLU 190.0046
LEU 200.0044
LYS 210.0045
CYS 220.0044
GLN 230.0045
VAL 240.0042
LEU 250.0044
LEU 260.0041
SER 270.0042
ASN 280.0040
PRO 290.0041
THR 300.0040
SER 310.0035
GLY 320.0035
CYS 330.0035
SER 340.0032
TRP 350.0034
LEU 360.0031
PHE 370.0032
GLN 380.0033
PRO 390.0035
ARG 400.0038
GLY 410.0036
ALA 420.0034
ALA 430.0030
ALA 440.0030
SER 450.0027
PRO 460.0027
THR 470.0026
PHE 480.0026
LEU 490.0029
LEU 500.0030
TYR 510.0031
LEU 520.0035
SER 530.0036
GLN 540.0039
ASN 550.0036
LYS 560.0035
PRO 570.0033
LYS 580.0028
ALA 590.0027
ALA 600.0024
GLU 610.0021
GLY 620.0022
LEU 630.0026
ASP 640.0029
THR 650.0031
GLN 660.0034
ARG 670.0036
PHE 680.0035
SER 690.0036
GLY 700.0038
LYS 710.0041
ARG 720.0043
LEU 730.0047
GLY 740.0048
ASP 750.0046
THR 760.0046
PHE 770.0042
VAL 780.0043
LEU 790.0040
THR 800.0041
LEU 810.0040
SER 820.0041
ASP 830.0042
PHE 840.0042
ARG 850.0041
ARG 860.0041
GLU 870.0037
ASN 880.0037
GLU 890.0040
GLY 900.0039
TYR 910.0038
TYR 920.0037
PHE 930.0037
CYS 940.0036
SER 950.0032
ALA 960.0033
LEU 970.0031
SER 980.0033
ASN 990.0030
SER 1000.0026
ILE 1010.0028
MET 1020.0029
TYR 1030.0033
PHE 1040.0034
SER 1050.0038
HIS 1060.0040
PHE 1070.0040
VAL 1080.0043
PRO 1090.0044
VAL 1100.0044
PHE 1110.0046
LEU 1120.0049
PRO 1130.0053
ALA 1140.0054

If you find results from this site helpful for your research, please cite one of our papers:

elNémo is maintained by Yves-Henri Sanejouand.
It was developed by Karsten Suhre.
Between 2003 and 2014, it was hosted by IGS (Marseille).
Between 2015 and 2025, it was hosted by US2B (Nantes).
Last modification: april 24th, 2026.