CNRS Nantes University US2B US2B
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***  MHC1  ***

<R2> analysis for 2607180828532135053

---  normal mode 19  ---

This page gives a visualization of the normalized mean square displacement <R2> of all C-alpha atoms in the protein that are associated to this mode (black bars). The three components of the corresponding eigenvector are shown on the left (colored bars). Here is the raw data for <R2> and for the eigenvector (shift-click on the links for download).

XYZresidue<R2><R2>max = 0.0970
MET 10.0070
SER 20.0062
THR 30.0058
ILE 40.0046
THR 50.0046
LYS 60.0039
ASP 70.0035
GLN 80.0032
ILE 90.0024
LEU 100.0020
GLU 110.0018
GLY 120.0013
VAL 130.0006
ALA 140.0006
ALA 150.0011
LEU 160.0008
SER 170.0013
VAL 180.0014
MET 190.0021
GLU 200.0017
ILE 210.0015
VAL 220.0022
GLU 230.0025
LEU 240.0020
ILE 250.0025
SER 260.0029
ALA 270.0031
MET 280.0031
GLU 290.0035
GLU 300.0039
LYS 310.0040
PHE 320.0041
GLY 330.0042
VAL 340.0038
SER 350.0033
ALA 360.0031
ALA 370.0027
ALA 380.0031
VAL 390.0035
ALA 400.0031
ALA 410.0032
GLY 420.0035
PRO 430.0039
ALA 440.0039
ALA 450.0035
ALA 460.0035
VAL 470.0038
GLU 480.0035
ALA 490.0031
ALA 500.0034
GLU 510.0034
GLU 520.0032
GLN 530.0031
THR 540.0036
GLU 550.0033
PHE 560.0031
ASP 570.0029
VAL 580.0030
VAL 590.0026
LEU 600.0027
ALA 610.0024
SER 620.0026
PHE 630.0031
GLY 640.0035
GLU 650.0038
ASN 660.0041
LYS 670.0036
VAL 680.0041
ALA 690.0044
VAL 700.0039
ILE 710.0039
LYS 720.0045
ALA 730.0045
VAL 740.0040
ARG 750.0044
GLY 760.0049
ALA 770.0045
THR 780.0043
GLY 790.0047
LEU 800.0043
GLY 810.0043
LEU 820.0041
LYS 830.0036
GLU 840.0034
ALA 850.0035
LYS 860.0032
ASP 870.0026
LEU 880.0027
VAL 890.0028
GLU 900.0023
SER 910.0019
ALA 920.0020
PRO 930.0019
ALA 940.0022
VAL 950.0026
LEU 960.0031
LYS 970.0034
GLU 980.0032
GLY 990.0035
VAL 1000.0038
ASN 1010.0041
LYS 1020.0039
ASP 1030.0045
GLU 1040.0044
ALA 1050.0039
GLU 1060.0041
THR 1070.0046
LEU 1080.0042
LYS 1090.0039
LYS 1100.0045
SER 1110.0047
LEU 1120.0041
GLU 1130.0042
GLU 1140.0047
ALA 1150.0045
GLY 1160.0041
ALA 1170.0036
SER 1180.0032
VAL 1190.0031
GLU 1200.0027
ILE 1210.0029
LYS 1220.0025
GLU 1230.0026
ALA 1240.0027
ALA 1250.0024
ALA 1260.0027
LYS 1270.0027
ALA 1280.0027
TYR 1290.0028
LYS 1300.0029
ILE 1310.0028
ILE 1320.0030
SER 1330.0029
LEU 1340.0028
LYS 1350.0030
TYR 1360.0025
THR 1370.0022
ARG 1380.0027
LYS 1390.0033
VAL 1400.0046
CYS 1410.0059
ILE 1420.0077
GLY 1430.0084
PRO 1440.0102
GLY 1450.0115
PRO 1460.0116
GLY 1470.0125
LYS 1480.0125
ALA 1490.0120
TYR 1500.0109
LYS 1510.0104
ILE 1520.0087
ILE 1530.0082
SER 1540.0067
LEU 1550.0059
LYS 1560.0050
TYR 1570.0042
THR 1580.0037
ARG 1590.0029
LYS 1600.0027
VAL 1610.0019
CYS 1620.0025
GLY 1630.0018
PRO 1640.0022
GLY 1650.0033
PRO 1660.0050
GLY 1670.0055
GLY 1680.0041
LYS 1690.0050
ALA 1700.0035
TYR 1710.0043
LYS 1720.0042
ILE 1730.0048
ILE 1740.0050
SER 1750.0058
LEU 1760.0063
LYS 1770.0072
TYR 1780.0083
THR 1790.0091
ARG 1800.0102
LYS 1810.0106
VAL 1820.0118
GLY 1830.0117
PRO 1840.0116
GLY 1850.0098
PRO 1860.0085
GLY 1870.0080
ILE 1880.0062
ILE 1890.0059
SER 1900.0044
LEU 1910.0037
LYS 1920.0032
TYR 1930.0026
THR 1940.0024
ARG 1950.0020
LYS 1960.0022
VAL 1970.0022
CYS 1980.0023
ILE 1990.0028
GLN 2000.0029
LEU 2010.0028
GLY 2020.0025
GLY 2030.0022
PRO 2040.0018
GLY 2050.0017
PRO 2060.0017
GLY 2070.0020
ASN 2080.0023
ILE 2090.0024
LYS 2100.0025
THR 2110.0027
ALA 2120.0029
PHE 2130.0029
HIS 2140.0030
CYS 2150.0032
TYR 2160.0032
ALA 2170.0034
ALA 2180.0033
TYR 2190.0034
MET 2200.0037
THR 2210.0037
SER 2220.0039
ILE 2230.0039
LYS 2240.0040
ALA 2250.0041
CYS 2260.0030
ASP 2270.0028
LEU 2280.0080
LYS 2290.0127
LYS 2300.0183
PRO 2310.0198
LEU 2320.0217
MET 2330.0235
GLU 2340.0253
SER 2350.0280
GLY 2360.0280
TRP 2370.0262
SER 2380.0263
ASP 2390.0256
THR 2400.0253
ALA 2410.0298
HIS 2420.0388
GLY 2430.0518
LYS 2440.0757
LYS 2450.0887
SER 2460.0934
LEU 2470.0802
PRO 2480.0857
SER 2490.0794
SER 2500.0620
SER 2510.0433
SER 2520.0323
TYR 2530.0342
SER 2540.0250
TYR 2550.0259
ARG 2560.0202
ARG 2570.0178
LYS 2580.0149
LEU 2590.0148
THR 2600.0148
ASN 2610.0177
PRO 2620.0228
ALA 2630.0186
ASN 2640.0108
LYS 2650.0068
GLU 2660.0006
GLU 2670.0059
SER 2680.0068
ILE 2690.0057
LYS 2700.0122
LYS 2710.0106
GLN 2720.0054
LYS 2730.0051
TYR 2740.0059
SER 2750.0039
TYR 2760.0171
PRO 2770.0177
TRP 2780.0247
GLN 2790.0153
THR 2800.0039
SER 2810.0197
LYS 2820.0194
CYS 2830.0422
PHE 2840.0661
ASP 2880.0221
TYR 2890.0567
GLN 2900.0818
TYR 2910.0970
CYS 2970.0222
ASN 2980.0205
PRO 2990.0177
GLY 3000.0179
LYS 3010.0150
LYS 3020.0119
ASN 3030.0096
THR 3040.0091
ILE 3050.0061
SER 3060.0061
GLY 3070.0051
TYR 3080.0043
LYS 3090.0025
ARG 3100.0024
MET 3110.0026
MET 3120.0020
ALA 3130.0010
THR 3140.0015
LYS 3150.0028
ASP 3160.0036
SER 3170.0033
PHE 3180.0037
GLN 3190.0044
SER 3200.0046
PHE 3210.0053
ASN 3220.0049
LEU 3230.0048
THR 3240.0048
GLU 3250.0047
PRO 3260.0047
HIS 3270.0050
ILE 3280.0048
THR 3290.0051
THR 3300.0051
ASN 3310.0054
LYS 3320.0055
LEU 3330.0052
GLU 3340.0054
TRP 3350.0053
ILE 3360.0054
ASP 3370.0055
PRO 3380.0054
ASP 3390.0057
GLY 3400.0061
ASN 3410.0063
THR 3420.0065
ARG 3430.0071
GLY 3440.0075
GLY 3450.0080
GLY 3460.0085
GLY 10.0026
SER 20.0023
HIS 30.0019
SER 40.0014
MET 50.0010
ARG 60.0007
TYR 70.0004
PHE 80.0004
PHE 90.0005
THR 100.0007
SER 110.0011
VAL 120.0013
SER 130.0017
ARG 140.0018
PRO 150.0022
GLY 160.0025
ARG 170.0023
GLY 180.0022
GLU 190.0020
PRO 200.0017
ARG 210.0014
PHE 220.0011
ILE 230.0008
ALA 240.0006
VAL 250.0006
GLY 260.0007
TYR 270.0010
VAL 280.0013
ASP 290.0015
ASP 300.0015
THR 310.0015
GLN 320.0012
PHE 330.0013
VAL 340.0011
ARG 350.0010
PHE 360.0011
ASP 370.0012
SER 380.0015
ASP 390.0016
ALA 400.0017
ALA 410.0022
SER 420.0021
GLN 430.0019
ARG 440.0017
MET 450.0013
GLU 460.0015
PRO 470.0016
ARG 480.0015
ALA 490.0018
PRO 500.0022
TRP 510.0021
ILE 520.0018
GLU 530.0021
GLN 540.0023
GLU 550.0020
GLY 560.0021
PRO 570.0021
GLU 580.0018
TYR 590.0015
TRP 600.0016
ASP 610.0017
GLY 620.0013
GLU 630.0011
THR 640.0014
ARG 650.0014
LYS 660.0010
VAL 670.0009
LYS 680.0013
ALA 690.0013
HIS 700.0010
SER 710.0012
GLN 720.0015
THR 730.0014
HIS 740.0013
ARG 750.0017
VAL 760.0019
ASP 770.0017
LEU 780.0018
GLY 790.0022
THR 800.0023
LEU 810.0021
ARG 820.0023
GLY 830.0026
TYR 840.0026
TYR 850.0026
ASN 860.0027
GLN 870.0025
SER 880.0025
GLU 890.0024
ALA 900.0023
GLY 910.0021
SER 920.0018
HIS 930.0016
THR 940.0013
VAL 950.0013
GLN 960.0010
ARG 970.0009
MET 980.0007
TYR 990.0008
GLY 1000.0008
CYS 1010.0012
ASP 1020.0016
VAL 1030.0019
GLY 1040.0023
SER 1050.0026
ASP 1060.0025
TRP 1070.0021
ARG 1080.0020
PHE 1090.0017
LEU 1100.0020
ARG 1110.0017
GLY 1120.0014
TYR 1130.0013
HIS 1140.0011
GLN 1150.0013
TYR 1160.0013
ALA 1170.0014
TYR 1180.0016
ASP 1190.0015
GLY 1200.0014
LYS 1210.0017
ASP 1220.0018
TYR 1230.0019
ILE 1240.0019
ALA 1250.0017
LEU 1260.0017
LYS 1270.0020
GLU 1280.0020
ASP 1290.0021
LEU 1300.0017
ARG 1310.0020
SER 1320.0022
TRP 1330.0021
THR 1340.0023
ALA 1350.0024
ALA 1360.0025
ASP 1370.0026
MET 1380.0028
ALA 1390.0026
ALA 1400.0024
GLN 1410.0026
THR 1420.0026
THR 1430.0022
LYS 1440.0023
HIS 1450.0025
LYS 1460.0023
TRP 1470.0020
GLU 1480.0022
ALA 1490.0023
ALA 1500.0020
HIS 1510.0018
VAL 1520.0015
ALA 1530.0015
GLU 1540.0014
GLN 1550.0010
LEU 1560.0010
ARG 1570.0012
ALA 1580.0009
TYR 1590.0006
LEU 1600.0009
GLU 1610.0012
GLY 1620.0009
THR 1630.0006
CYS 1640.0008
VAL 1650.0012
GLU 1660.0012
TRP 1670.0011
LEU 1680.0013
ARG 1690.0017
ARG 1700.0017
TYR 1710.0017
LEU 1720.0020
GLU 1730.0022
ASN 1740.0022
GLY 1750.0022
LYS 1760.0025
GLU 1770.0027
THR 1780.0024
LEU 1790.0022
GLN 1800.0025
ARG 1810.0027
THR 1820.0028
ASP 1830.0028
ALA 1840.0030
PRO 1850.0029
LYS 1860.0031
THR 1870.0032
HIS 1880.0033
MET 1890.0032
THR 1900.0030
HIS 1910.0031
HIS 1920.0028
ALA 1930.0030
VAL 1940.0027
SER 1950.0030
ASP 1960.0033
HIS 1970.0036
GLU 1980.0034
ALA 1990.0032
THR 2000.0029
LEU 2010.0031
ARG 2020.0028
CYS 2030.0029
TRP 2040.0027
ALA 2050.0027
LEU 2060.0026
SER 2070.0026
PHE 2080.0025
TYR 2090.0023
PRO 2100.0021
ALA 2110.0019
GLU 2120.0021
ILE 2130.0024
THR 2140.0026
LEU 2150.0027
THR 2160.0030
TRP 2170.0033
GLN 2180.0037
ARG 2190.0040
ASP 2200.0044
GLY 2210.0043
GLU 2220.0040
ASP 2230.0036
GLN 2240.0034
THR 2250.0032
GLN 2260.0031
ASP 2270.0031
THR 2280.0028
GLU 2290.0024
LEU 2300.0021
VAL 2310.0017
GLU 2320.0015
THR 2330.0016
ARG 2340.0014
PRO 2350.0015
ALA 2360.0019
GLY 2370.0018
ASP 2380.0022
GLY 2390.0021
THR 2400.0022
PHE 2410.0020
GLN 2420.0021
LYS 2430.0021
TRP 2440.0023
ALA 2450.0025
ALA 2460.0027
VAL 2470.0030
VAL 2480.0031
VAL 2490.0035
PRO 2500.0038
SER 2510.0039
GLY 2520.0043
GLN 2530.0042
GLU 2540.0040
GLN 2550.0043
ARG 2560.0043
TYR 2570.0039
THR 2580.0038
CYS 2590.0034
HIS 2600.0034
VAL 2610.0031
GLN 2620.0030
HIS 2630.0029
GLU 2640.0029
GLY 2650.0031
LEU 2660.0034
PRO 2670.0037
LYS 2680.0038
PRO 2690.0036
LEU 2700.0037
THR 2710.0039
LEU 2720.0038
ARG 2730.0041
TRP 2740.0039
GLU 2750.0044
PRO 2760.0047
GLN 2780.0016
ARG 2790.0012
THR 2800.0010
PRO 2810.0007
LYS 2820.0008
ILE 2830.0007
GLN 2840.0010
VAL 2850.0012
TYR 2860.0016
SER 2870.0020
ARG 2880.0022
HIS 2890.0026
PRO 2900.0028
ALA 2910.0027
GLU 2920.0031
ASN 2930.0030
GLY 2940.0033
LYS 2950.0032
SER 2960.0030
ASN 2970.0026
PHE 2980.0022
LEU 2990.0018
ASN 3000.0014
CYS 3010.0010
TYR 3020.0009
VAL 3030.0005
SER 3040.0007
GLY 3050.0009
PHE 3060.0008
HIS 3070.0010
PRO 3080.0010
SER 3090.0008
ASP 3100.0010
ILE 3110.0008
GLU 3120.0010
VAL 3130.0008
ASP 3140.0011
LEU 3150.0012
LEU 3160.0013
LYS 3170.0017
ASN 3180.0015
GLY 3190.0012
GLU 3200.0016
ARG 3210.0016
ILE 3220.0018
GLU 3230.0021
LYS 3240.0022
VAL 3250.0018
GLU 3260.0016
HIS 3270.0012
SER 3280.0010
ASP 3290.0008
LEU 3300.0005
SER 3310.0004
PHE 3320.0006
SER 3330.0009
LYS 3340.0012
ASP 3350.0013
TRP 3360.0010
SER 3370.0009
PHE 3380.0005
TYR 3390.0005
LEU 3400.0006
LEU 3410.0009
TYR 3420.0011
TYR 3430.0015
THR 3440.0019
GLU 3450.0023
PHE 3460.0024
THR 3470.0027
PRO 3480.0025
THR 3490.0027
GLU 3500.0026
LYS 3510.0023
ASP 3520.0021
GLU 3530.0016
TYR 3540.0015
ALA 3550.0010
CYS 3560.0008
ARG 3570.0006
VAL 3580.0006
ASN 3590.0008
HIS 3600.0009
VAL 3610.0013
THR 3620.0013
LEU 3630.0012
SER 3640.0016
GLN 3650.0013
PRO 3660.0009
LYS 3670.0005
ILE 3680.0004
VAL 3690.0007
LYS 3700.0010
TRP 3710.0014
ASP 3720.0017
ARG 3730.0021
ASP 3740.0024
MET 3750.0022
SER 10.0021
GLN 20.0020
PHE 30.0021
ARG 40.0021
VAL 50.0024
SER 60.0025
PRO 70.0027
LEU 80.0028
ASP 90.0029
ARG 100.0032
THR 110.0036
TRP 120.0037
ASN 130.0041
LEU 140.0044
GLY 150.0043
GLU 160.0038
THR 170.0035
VAL 180.0034
GLU 190.0030
LEU 200.0028
LYS 210.0025
CYS 220.0024
GLN 230.0021
VAL 240.0021
LEU 250.0017
LEU 260.0018
SER 270.0016
ASN 280.0019
PRO 290.0023
THR 300.0026
SER 310.0028
GLY 320.0028
CYS 330.0028
SER 340.0032
TRP 350.0033
LEU 360.0035
PHE 370.0037
GLN 380.0039
PRO 390.0041
ARG 400.0042
GLY 410.0046
ALA 420.0046
ALA 430.0045
ALA 440.0044
SER 450.0043
PRO 460.0040
THR 470.0041
PHE 480.0039
LEU 490.0039
LEU 500.0036
TYR 510.0035
LEU 520.0032
SER 530.0030
GLN 540.0030
ASN 550.0034
LYS 560.0036
PRO 570.0036
LYS 580.0039
ALA 590.0041
ALA 600.0043
GLU 610.0048
GLY 620.0050
LEU 630.0046
ASP 640.0045
THR 650.0042
GLN 660.0042
ARG 670.0040
PHE 680.0038
SER 690.0035
GLY 700.0032
LYS 710.0029
ARG 720.0026
LEU 730.0022
GLY 740.0021
ASP 750.0020
THR 760.0021
PHE 770.0025
VAL 780.0027
LEU 790.0031
THR 800.0033
LEU 810.0036
SER 820.0038
ASP 830.0041
PHE 840.0041
ARG 850.0045
ARG 860.0045
GLU 870.0046
ASN 880.0041
GLU 890.0041
GLY 900.0039
TYR 910.0036
TYR 920.0033
PHE 930.0031
CYS 940.0029
SER 950.0028
ALA 960.0027
LEU 970.0027
SER 980.0024
ASN 990.0024
SER 1000.0027
ILE 1010.0026
MET 1020.0028
TYR 1030.0026
PHE 1040.0028
SER 1050.0026
HIS 1060.0027
PHE 1070.0031
VAL 1080.0030
PRO 1090.0034
VAL 1100.0035
PHE 1110.0038
LEU 1120.0041
PRO 1130.0041
ALA 1140.0043
SER 10.0051
GLN 20.0050
PHE 30.0050
ARG 40.0052
VAL 50.0050
SER 60.0051
PRO 70.0052
LEU 80.0054
ASP 90.0057
ARG 100.0054
THR 110.0052
TRP 120.0049
ASN 130.0049
LEU 140.0045
GLY 150.0043
GLU 160.0045
THR 170.0043
VAL 180.0044
GLU 190.0044
LEU 200.0045
LYS 210.0046
CYS 220.0047
GLN 230.0049
VAL 240.0048
LEU 250.0051
LEU 260.0050
SER 270.0052
ASN 280.0049
PRO 290.0047
THR 300.0044
SER 310.0040
GLY 320.0038
CYS 330.0039
SER 340.0036
TRP 350.0037
LEU 360.0036
PHE 370.0036
GLN 380.0037
PRO 390.0039
ARG 400.0042
GLY 410.0040
ALA 420.0039
ALA 430.0035
ALA 440.0035
SER 450.0032
PRO 460.0033
THR 470.0031
PHE 480.0030
LEU 490.0031
LEU 500.0032
TYR 510.0033
LEU 520.0035
SER 530.0036
GLN 540.0037
ASN 550.0033
LYS 560.0031
PRO 570.0031
LYS 580.0028
ALA 590.0027
ALA 600.0025
GLU 610.0021
GLY 620.0022
LEU 630.0026
ASP 640.0027
THR 650.0028
GLN 660.0029
ARG 670.0033
PHE 680.0033
SER 690.0034
GLY 700.0036
LYS 710.0039
ARG 720.0042
LEU 730.0046
GLY 740.0048
ASP 750.0048
THR 760.0047
PHE 770.0043
VAL 780.0042
LEU 790.0040
THR 800.0039
LEU 810.0038
SER 820.0038
ASP 830.0039
PHE 840.0041
ARG 850.0040
ARG 860.0042
GLU 870.0038
ASN 880.0038
GLU 890.0042
GLY 900.0042
TYR 910.0042
TYR 920.0041
PHE 930.0042
CYS 940.0041
SER 950.0039
ALA 960.0040
LEU 970.0040
SER 980.0043
ASN 990.0042
SER 1000.0039
ILE 1010.0040
MET 1020.0039
TYR 1030.0042
PHE 1040.0042
SER 1050.0045
HIS 1060.0047
PHE 1070.0046
VAL 1080.0047
PRO 1090.0048
VAL 1100.0046
PHE 1110.0048
LEU 1120.0049
PRO 1130.0054
ALA 1140.0055

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elNémo is maintained by Yves-Henri Sanejouand.
It was developed by Karsten Suhre.
Between 2003 and 2014, it was hosted by IGS (Marseille).
Between 2015 and 2025, it was hosted by US2B (Nantes).
Last modification: april 24th, 2026.