CNRS Nantes University US2B US2B
home |  start a new run |  job status |  references&downloads |  examples |  help  

Should you encounter any unexpected behaviour,
please let us know.
elNémo has been relocated.
**Some cleaning from time to time**
Sorry for the inconvenience.


***  MHC1  ***

<R2> analysis for 2607180828532135053

---  normal mode 20  ---

This page gives a visualization of the normalized mean square displacement <R2> of all C-alpha atoms in the protein that are associated to this mode (black bars). The three components of the corresponding eigenvector are shown on the left (colored bars). Here is the raw data for <R2> and for the eigenvector (shift-click on the links for download).

XYZresidue<R2><R2>max = 0.1149
MET 10.0424
SER 20.0365
THR 30.0313
ILE 40.0240
THR 50.0200
LYS 60.0134
ASP 70.0113
GLN 80.0154
ILE 90.0107
LEU 100.0065
GLU 110.0125
GLY 120.0133
VAL 130.0105
ALA 140.0130
ALA 150.0174
LEU 160.0153
SER 170.0170
VAL 180.0161
MET 190.0166
GLU 200.0147
ILE 210.0127
VAL 220.0134
GLU 230.0137
LEU 240.0115
ILE 250.0110
SER 260.0121
ALA 270.0117
MET 280.0110
GLU 290.0117
GLU 300.0129
LYS 310.0126
PHE 320.0127
GLY 330.0130
VAL 340.0120
SER 350.0115
ALA 360.0122
ALA 370.0115
ALA 380.0119
VAL 390.0139
ALA 400.0143
ALA 410.0137
GLY 420.0153
PRO 430.0153
ALA 440.0144
ALA 450.0127
ALA 460.0124
VAL 470.0116
GLU 480.0104
ALA 490.0098
ALA 500.0091
GLU 510.0084
GLU 520.0075
GLN 530.0064
THR 540.0062
GLU 550.0053
PHE 560.0043
ASP 570.0034
VAL 580.0025
VAL 590.0017
LEU 600.0007
ALA 610.0008
SER 620.0010
PHE 630.0013
GLY 640.0020
GLU 650.0028
ASN 660.0024
LYS 670.0024
VAL 680.0027
ALA 690.0018
VAL 700.0013
ILE 710.0022
LYS 720.0023
ALA 730.0015
VAL 740.0020
ARG 750.0029
GLY 760.0028
ALA 770.0028
THR 780.0034
GLY 790.0041
LEU 800.0041
GLY 810.0046
LEU 820.0042
LYS 830.0045
GLU 840.0040
ALA 850.0031
LYS 860.0032
ASP 870.0032
LEU 880.0024
VAL 890.0018
GLU 900.0023
SER 910.0018
ALA 920.0009
PRO 930.0004
ALA 940.0013
VAL 950.0020
LEU 960.0023
LYS 970.0032
GLU 980.0039
GLY 990.0047
VAL 1000.0046
ASN 1010.0052
LYS 1020.0049
ASP 1030.0047
GLU 1040.0041
ALA 1050.0035
GLU 1060.0035
THR 1070.0031
LEU 1080.0024
LYS 1090.0021
LYS 1100.0021
SER 1110.0013
LEU 1120.0008
GLU 1130.0013
GLU 1140.0010
ALA 1150.0006
GLY 1160.0013
ALA 1170.0008
SER 1180.0013
VAL 1190.0014
GLU 1200.0022
ILE 1210.0030
LYS 1220.0032
GLU 1230.0042
ALA 1240.0042
ALA 1250.0042
ALA 1260.0049
LYS 1270.0048
ALA 1280.0047
TYR 1290.0048
LYS 1300.0047
ILE 1310.0043
ILE 1320.0037
SER 1330.0024
LEU 1340.0019
LYS 1350.0007
TYR 1360.0011
THR 1370.0026
ARG 1380.0049
LYS 1390.0070
VAL 1400.0094
CYS 1410.0122
ILE 1420.0152
GLY 1430.0175
PRO 1440.0206
GLY 1450.0237
PRO 1460.0253
GLY 1470.0264
LYS 1480.0248
ALA 1490.0227
TYR 1500.0196
LYS 1510.0175
ILE 1520.0146
ILE 1530.0126
SER 1540.0098
LEU 1550.0077
LYS 1560.0054
TYR 1570.0040
THR 1580.0018
ARG 1590.0021
LYS 1600.0022
VAL 1610.0042
CYS 1620.0052
GLY 1630.0069
PRO 1640.0082
GLY 1650.0084
PRO 1660.0102
GLY 1670.0106
GLY 1680.0102
LYS 1690.0086
ALA 1700.0071
TYR 1710.0055
LYS 1720.0045
ILE 1730.0023
ILE 1740.0029
SER 1750.0029
LEU 1760.0053
LYS 1770.0069
TYR 1780.0096
THR 1790.0115
ARG 1800.0142
LYS 1810.0160
VAL 1820.0189
GLY 1830.0203
PRO 1840.0218
GLY 1850.0198
PRO 1860.0175
GLY 1870.0156
ILE 1880.0123
ILE 1890.0108
SER 1900.0077
LEU 1910.0060
LYS 1920.0040
TYR 1930.0029
THR 1940.0009
ARG 1950.0021
LYS 1960.0031
VAL 1970.0037
CYS 1980.0040
ILE 1990.0046
GLN 2000.0050
LEU 2010.0043
GLY 2020.0037
GLY 2030.0033
PRO 2040.0030
GLY 2050.0025
PRO 2060.0027
GLY 2070.0029
ASN 2080.0035
ILE 2090.0039
LYS 2100.0038
THR 2110.0040
ALA 2120.0043
PHE 2130.0044
HIS 2140.0043
CYS 2150.0046
TYR 2160.0045
ALA 2170.0049
ALA 2180.0050
TYR 2190.0043
MET 2200.0042
THR 2210.0046
SER 2220.0041
ILE 2230.0032
LYS 2240.0029
ALA 2250.0020
CYS 2260.0063
ASP 2270.0165
LEU 2280.0205
LYS 2290.0323
LYS 2300.0381
PRO 2310.0391
LEU 2320.0456
MET 2330.0407
GLU 2340.0475
SER 2350.0475
GLY 2360.0358
TRP 2370.0331
SER 2380.0264
ASP 2390.0245
THR 2400.0161
ALA 2410.0160
HIS 2420.0088
GLY 2430.0076
LYS 2440.0093
LYS 2450.0089
SER 2460.0103
LEU 2470.0083
PRO 2480.0073
SER 2490.0119
SER 2500.0139
SER 2510.0183
SER 2520.0229
TYR 2530.0218
SER 2540.0253
TYR 2550.0248
ARG 2560.0261
ARG 2570.0279
LYS 2580.0258
LEU 2590.0309
THR 2600.0279
ASN 2610.0340
PRO 2620.0294
ALA 2630.0335
ASN 2640.0286
LYS 2650.0377
GLU 2660.0368
GLU 2670.0448
SER 2680.0440
ILE 2690.0485
LYS 2700.0524
LYS 2710.0465
GLN 2720.0471
LYS 2730.0366
TYR 2740.0362
SER 2750.0280
TYR 2760.0278
PRO 2770.0191
TRP 2780.0271
GLN 2790.0247
THR 2800.0211
SER 2810.0299
LYS 2820.0532
CYS 2830.0710
PHE 2840.1149
ASP 2880.0149
TYR 2890.0068
GLN 2900.0094
TYR 2910.0112
CYS 2970.0255
ASN 2980.0239
PRO 2990.0211
GLY 3000.0213
LYS 3010.0175
LYS 3020.0158
ASN 3030.0132
THR 3040.0124
ILE 3050.0090
SER 3060.0077
GLY 3070.0066
TYR 3080.0041
LYS 3090.0044
ARG 3100.0052
MET 3110.0040
MET 3120.0025
ALA 3130.0030
THR 3140.0037
LYS 3150.0032
ASP 3160.0042
SER 3170.0046
PHE 3180.0040
GLN 3190.0042
SER 3200.0042
PHE 3210.0042
ASN 3220.0046
LEU 3230.0044
THR 3240.0051
GLU 3250.0051
PRO 3260.0043
HIS 3270.0043
ILE 3280.0036
THR 3290.0038
THR 3300.0035
ASN 3310.0031
LYS 3320.0031
LEU 3330.0029
GLU 3340.0036
TRP 3350.0040
ILE 3360.0046
ASP 3370.0046
PRO 3380.0055
ASP 3390.0056
GLY 3400.0054
ASN 3410.0049
THR 3420.0042
ARG 3430.0048
GLY 3440.0042
GLY 3450.0046
GLY 3460.0044
GLY 10.0040
SER 20.0041
HIS 30.0043
SER 40.0043
MET 50.0046
ARG 60.0042
TYR 70.0043
PHE 80.0037
PHE 90.0039
THR 100.0034
SER 110.0035
VAL 120.0030
SER 130.0033
ARG 140.0030
PRO 150.0032
GLY 160.0032
ARG 170.0031
GLY 180.0036
GLU 190.0040
PRO 200.0036
ARG 210.0034
PHE 220.0038
ILE 230.0037
ALA 240.0041
VAL 250.0040
GLY 260.0044
TYR 270.0042
VAL 280.0044
ASP 290.0038
ASP 300.0033
THR 310.0039
GLN 320.0041
PHE 330.0048
VAL 340.0049
ARG 350.0046
PHE 360.0046
ASP 370.0042
SER 380.0044
ASP 390.0040
ALA 400.0045
ALA 410.0051
SER 420.0056
GLN 430.0055
ARG 440.0058
MET 450.0056
GLU 460.0055
PRO 470.0055
ARG 480.0049
ALA 490.0052
PRO 500.0058
TRP 510.0060
ILE 520.0061
GLU 530.0065
GLN 540.0071
GLU 550.0071
GLY 560.0077
PRO 570.0077
GLU 580.0079
TYR 590.0072
TRP 600.0068
ASP 610.0072
GLY 620.0071
GLU 630.0063
THR 640.0062
ARG 650.0066
LYS 660.0063
VAL 670.0055
LYS 680.0056
ALA 690.0060
HIS 700.0053
SER 710.0049
GLN 720.0052
THR 730.0053
HIS 740.0047
ARG 750.0046
VAL 760.0050
ASP 770.0048
LEU 780.0042
GLY 790.0047
THR 800.0051
LEU 810.0045
ARG 820.0044
GLY 830.0050
TYR 840.0050
TYR 850.0047
ASN 860.0047
GLN 870.0044
SER 880.0044
GLU 890.0043
ALA 900.0040
GLY 910.0029
SER 920.0028
HIS 930.0031
THR 940.0031
VAL 950.0036
GLN 960.0035
ARG 970.0040
MET 980.0040
TYR 990.0045
GLY 1000.0047
CYS 1010.0048
ASP 1020.0045
VAL 1030.0048
GLY 1040.0046
SER 1050.0046
ASP 1060.0053
TRP 1070.0054
ARG 1080.0056
PHE 1090.0056
LEU 1100.0050
ARG 1110.0049
GLY 1120.0050
TYR 1130.0046
HIS 1140.0047
GLN 1150.0042
TYR 1160.0041
ALA 1170.0036
TYR 1180.0036
ASP 1190.0030
GLY 1200.0027
LYS 1210.0031
ASP 1220.0036
TYR 1230.0041
ILE 1240.0046
ALA 1250.0046
LEU 1260.0051
LYS 1270.0051
GLU 1280.0050
ASP 1290.0057
LEU 1300.0057
ARG 1310.0063
SER 1320.0060
TRP 1330.0055
THR 1340.0050
ALA 1350.0050
ALA 1360.0046
ASP 1370.0047
MET 1380.0052
ALA 1390.0050
ALA 1400.0049
GLN 1410.0056
THR 1420.0058
THR 1430.0056
LYS 1440.0058
HIS 1450.0064
LYS 1460.0064
TRP 1470.0062
GLU 1480.0067
ALA 1490.0072
ALA 1500.0070
HIS 1510.0070
VAL 1520.0064
ALA 1530.0063
GLU 1540.0069
GLN 1550.0067
LEU 1560.0061
ARG 1570.0063
ALA 1580.0067
TYR 1590.0063
LEU 1600.0058
GLU 1610.0062
GLY 1620.0066
THR 1630.0065
CYS 1640.0058
VAL 1650.0058
GLU 1660.0064
TRP 1670.0062
LEU 1680.0056
ARG 1690.0059
ARG 1700.0063
TYR 1710.0058
LEU 1720.0055
GLU 1730.0062
ASN 1740.0063
GLY 1750.0057
LYS 1760.0056
GLU 1770.0055
THR 1780.0050
LEU 1790.0047
GLN 1800.0048
ARG 1810.0044
THR 1820.0037
ASP 1830.0035
ALA 1840.0029
PRO 1850.0025
LYS 1860.0027
THR 1870.0023
HIS 1880.0026
MET 1890.0025
THR 1900.0030
HIS 1910.0033
HIS 1920.0036
ALA 1930.0040
VAL 1940.0038
SER 1950.0044
ASP 1960.0049
HIS 1970.0046
GLU 1980.0039
ALA 1990.0035
THR 2000.0029
LEU 2010.0025
ARG 2020.0021
CYS 2030.0017
TRP 2040.0019
ALA 2050.0019
LEU 2060.0026
SER 2070.0031
PHE 2080.0028
TYR 2090.0031
PRO 2100.0030
ALA 2110.0023
GLU 2120.0020
ILE 2130.0015
THR 2140.0008
LEU 2150.0004
THR 2160.0005
TRP 2170.0011
GLN 2180.0014
ARG 2190.0021
ASP 2200.0022
GLY 2210.0017
GLU 2220.0019
ASP 2230.0016
GLN 2240.0018
THR 2250.0017
GLN 2260.0020
ASP 2270.0020
THR 2280.0014
GLU 2290.0012
LEU 2300.0006
VAL 2310.0007
GLU 2320.0008
THR 2330.0013
ARG 2340.0018
PRO 2350.0026
ALA 2360.0031
GLY 2370.0036
ASP 2380.0041
GLY 2390.0039
THR 2400.0033
PHE 2410.0025
GLN 2420.0021
LYS 2430.0015
TRP 2440.0013
ALA 2450.0011
ALA 2460.0017
VAL 2470.0021
VAL 2480.0027
VAL 2490.0030
PRO 2500.0037
SER 2510.0041
GLY 2520.0041
GLN 2530.0035
GLU 2540.0031
GLN 2550.0029
ARG 2560.0026
TYR 2570.0021
THR 2580.0015
CYS 2590.0011
HIS 2600.0005
VAL 2610.0009
GLN 2620.0012
HIS 2630.0019
GLU 2640.0026
GLY 2650.0029
LEU 2660.0023
PRO 2670.0025
LYS 2680.0017
PRO 2690.0011
LEU 2700.0011
THR 2710.0009
LEU 2720.0015
ARG 2730.0019
TRP 2740.0024
GLU 2750.0028
PRO 2760.0025
GLN 2780.0017
ARG 2790.0012
THR 2800.0006
PRO 2810.0002
LYS 2820.0005
ILE 2830.0012
GLN 2840.0018
VAL 2850.0026
TYR 2860.0030
SER 2870.0036
ARG 2880.0037
HIS 2890.0042
PRO 2900.0043
ALA 2910.0047
GLU 2920.0055
ASN 2930.0060
GLY 2940.0065
LYS 2950.0061
SER 2960.0058
ASN 2970.0050
PHE 2980.0044
LEU 2990.0038
ASN 3000.0031
CYS 3010.0024
TYR 3020.0018
VAL 3030.0012
SER 3040.0009
GLY 3050.0008
PHE 3060.0008
HIS 3070.0014
PRO 3080.0017
SER 3090.0018
ASP 3100.0015
ILE 3110.0011
GLU 3120.0015
VAL 3130.0020
ASP 3140.0027
LEU 3150.0032
LEU 3160.0037
LYS 3170.0045
ASN 3180.0048
GLY 3190.0042
GLU 3200.0043
ARG 3210.0038
ILE 3220.0042
GLU 3230.0044
LYS 3240.0045
VAL 3250.0039
GLU 3260.0038
HIS 3270.0032
SER 3280.0031
ASP 3290.0033
LEU 3300.0027
SER 3310.0027
PHE 3320.0024
SER 3330.0021
LYS 3340.0024
ASP 3350.0022
TRP 3360.0024
SER 3370.0017
PHE 3380.0017
TYR 3390.0016
LEU 3400.0021
LEU 3410.0025
TYR 3420.0028
TYR 3430.0035
THR 3440.0042
GLU 3450.0049
PHE 3460.0051
THR 3470.0056
PRO 3480.0053
THR 3490.0059
GLU 3500.0060
LYS 3510.0060
ASP 3520.0055
GLU 3530.0048
TYR 3540.0041
ALA 3550.0034
CYS 3560.0026
ARG 3570.0023
VAL 3580.0015
ASN 3590.0009
HIS 3600.0002
VAL 3610.0006
THR 3620.0010
LEU 3630.0011
SER 3640.0017
GLN 3650.0016
PRO 3660.0016
LYS 3670.0019
ILE 3680.0025
VAL 3690.0026
LYS 3700.0033
TRP 3710.0035
ASP 3720.0037
ARG 3730.0039
ASP 3740.0039
MET 3750.0032
SER 10.0026
GLN 20.0022
PHE 30.0027
ARG 40.0032
VAL 50.0036
SER 60.0040
PRO 70.0043
LEU 80.0045
ASP 90.0048
ARG 100.0051
THR 110.0049
TRP 120.0052
ASN 130.0054
LEU 140.0057
GLY 150.0059
GLU 160.0056
THR 170.0053
VAL 180.0049
GLU 190.0046
LEU 200.0042
LYS 210.0037
CYS 220.0033
GLN 230.0029
VAL 240.0024
LEU 250.0021
LEU 260.0015
SER 270.0011
ASN 280.0007
PRO 290.0011
THR 300.0011
SER 310.0018
GLY 320.0022
CYS 330.0026
SER 340.0031
TRP 350.0036
LEU 360.0039
PHE 370.0043
GLN 380.0044
PRO 390.0048
ARG 400.0049
GLY 410.0055
ALA 420.0053
ALA 430.0050
ALA 440.0050
SER 450.0047
PRO 460.0043
THR 470.0044
PHE 480.0041
LEU 490.0042
LEU 500.0038
TYR 510.0032
LEU 520.0029
SER 530.0023
GLN 540.0020
ASN 550.0022
LYS 560.0029
PRO 570.0032
LYS 580.0035
ALA 590.0040
ALA 600.0043
GLU 610.0047
GLY 620.0052
LEU 630.0050
ASP 640.0053
THR 650.0049
GLN 660.0054
ARG 670.0053
PHE 680.0048
SER 690.0044
GLY 700.0039
LYS 710.0034
ARG 720.0030
LEU 730.0030
GLY 740.0025
ASP 750.0024
THR 760.0029
PHE 770.0032
VAL 780.0037
LEU 790.0041
THR 800.0046
LEU 810.0051
SER 820.0055
ASP 830.0058
PHE 840.0055
ARG 850.0057
ARG 860.0053
GLU 870.0053
ASN 880.0053
GLU 890.0050
GLY 900.0048
TYR 910.0044
TYR 920.0042
PHE 930.0036
CYS 940.0032
SER 950.0029
ALA 960.0022
LEU 970.0018
SER 980.0013
ASN 990.0013
SER 1000.0019
ILE 1010.0019
MET 1020.0023
TYR 1030.0023
PHE 1040.0028
SER 1050.0030
HIS 1060.0035
PHE 1070.0039
VAL 1080.0042
PRO 1090.0046
VAL 1100.0049
PHE 1110.0050
LEU 1120.0049
PRO 1130.0046
ALA 1140.0041
SER 10.0054
GLN 20.0051
PHE 30.0052
ARG 40.0056
VAL 50.0055
SER 60.0057
PRO 70.0059
LEU 80.0062
ASP 90.0066
ARG 100.0063
THR 110.0059
TRP 120.0055
ASN 130.0053
LEU 140.0048
GLY 150.0047
GLU 160.0051
THR 170.0049
VAL 180.0049
GLU 190.0050
LEU 200.0050
LYS 210.0051
CYS 220.0050
GLN 230.0052
VAL 240.0048
LEU 250.0051
LEU 260.0047
SER 270.0047
ASN 280.0042
PRO 290.0042
THR 300.0038
SER 310.0033
GLY 320.0033
CYS 330.0035
SER 340.0033
TRP 350.0036
LEU 360.0035
PHE 370.0036
GLN 380.0039
PRO 390.0041
ARG 400.0047
GLY 410.0047
ALA 420.0048
ALA 430.0044
ALA 440.0040
SER 450.0037
PRO 460.0035
THR 470.0030
PHE 480.0027
LEU 490.0029
LEU 500.0029
TYR 510.0029
LEU 520.0034
SER 530.0034
GLN 540.0036
ASN 550.0033
LYS 560.0033
PRO 570.0031
LYS 580.0025
ALA 590.0024
ALA 600.0021
GLU 610.0016
GLY 620.0017
LEU 630.0023
ASP 640.0026
THR 650.0029
GLN 660.0033
ARG 670.0035
PHE 680.0035
SER 690.0037
GLY 700.0039
LYS 710.0043
ARG 720.0045
LEU 730.0051
GLY 740.0051
ASP 750.0050
THR 760.0050
PHE 770.0045
VAL 780.0046
LEU 790.0043
THR 800.0043
LEU 810.0041
SER 820.0042
ASP 830.0042
PHE 840.0043
ARG 850.0040
ARG 860.0041
GLU 870.0036
ASN 880.0038
GLU 890.0044
GLY 900.0044
TYR 910.0046
TYR 920.0043
PHE 930.0043
CYS 940.0041
SER 950.0037
ALA 960.0036
LEU 970.0033
SER 980.0034
ASN 990.0031
SER 1000.0029
ILE 1010.0035
MET 1020.0035
TYR 1030.0041
PHE 1040.0043
SER 1050.0047
HIS 1060.0051
PHE 1070.0050
VAL 1080.0051
PRO 1090.0053
VAL 1100.0050
PHE 1110.0052
LEU 1120.0054
PRO 1130.0060
ALA 1140.0062

If you find results from this site helpful for your research, please cite one of our papers:

elNémo is maintained by Yves-Henri Sanejouand.
It was developed by Karsten Suhre.
Between 2003 and 2014, it was hosted by IGS (Marseille).
Between 2015 and 2025, it was hosted by US2B (Nantes).
Last modification: april 24th, 2026.