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***  MHC1  ***

<R2> analysis for 2607180828532135053

---  normal mode 21  ---

This page gives a visualization of the normalized mean square displacement <R2> of all C-alpha atoms in the protein that are associated to this mode (black bars). The three components of the corresponding eigenvector are shown on the left (colored bars). Here is the raw data for <R2> and for the eigenvector (shift-click on the links for download).

XYZresidue<R2><R2>max = 0.1099
MET 10.0297
SER 20.0286
THR 30.0279
ILE 40.0230
THR 50.0270
LYS 60.0256
ASP 70.0260
GLN 80.0210
ILE 90.0160
LEU 100.0181
GLU 110.0163
GLY 120.0100
VAL 130.0095
ALA 140.0121
ALA 150.0085
LEU 160.0060
SER 170.0060
VAL 180.0065
MET 190.0088
GLU 200.0093
ILE 210.0101
VAL 220.0135
GLU 230.0163
LEU 240.0160
ILE 250.0189
SER 260.0205
ALA 270.0255
MET 280.0270
GLU 290.0280
GLU 300.0319
LYS 310.0365
PHE 320.0376
GLY 330.0360
VAL 340.0334
SER 350.0266
ALA 360.0278
ALA 370.0244
ALA 380.0297
VAL 390.0367
ALA 400.0360
ALA 410.0373
GLY 420.0450
PRO 430.0456
ALA 440.0425
ALA 450.0340
ALA 460.0310
VAL 470.0275
GLU 480.0218
ALA 490.0168
ALA 500.0134
GLU 510.0085
GLU 520.0069
GLN 530.0045
THR 540.0042
GLU 550.0022
PHE 560.0016
ASP 570.0010
VAL 580.0004
VAL 590.0004
LEU 600.0009
ALA 610.0011
SER 620.0017
PHE 630.0018
GLY 640.0023
GLU 650.0027
ASN 660.0024
LYS 670.0022
VAL 680.0021
ALA 690.0017
VAL 700.0014
ILE 710.0015
LYS 720.0012
ALA 730.0007
VAL 740.0007
ARG 750.0009
GLY 760.0003
ALA 770.0004
THR 780.0009
GLY 790.0012
LEU 800.0016
GLY 810.0020
LEU 820.0020
LYS 830.0025
GLU 840.0022
ALA 850.0017
LYS 860.0021
ASP 870.0023
LEU 880.0017
VAL 890.0017
GLU 900.0021
SER 910.0020
ALA 920.0016
PRO 930.0014
ALA 940.0013
VAL 950.0011
LEU 960.0010
LYS 970.0013
GLU 980.0017
GLY 990.0021
VAL 1000.0019
ASN 1010.0025
LYS 1020.0025
ASP 1030.0026
GLU 1040.0018
ALA 1050.0014
GLU 1060.0018
THR 1070.0017
LEU 1080.0009
LYS 1090.0012
LYS 1100.0018
SER 1110.0012
LEU 1120.0011
GLU 1130.0017
GLU 1140.0020
ALA 1150.0017
GLY 1160.0020
ALA 1170.0016
SER 1180.0015
VAL 1190.0009
GLU 1200.0007
ILE 1210.0006
LYS 1220.0003
GLU 1230.0010
ALA 1240.0016
ALA 1250.0016
ALA 1260.0019
LYS 1270.0021
ALA 1280.0015
TYR 1290.0016
LYS 1300.0015
ILE 1310.0009
ILE 1320.0015
SER 1330.0013
LEU 1340.0018
LYS 1350.0022
TYR 1360.0026
THR 1370.0030
ARG 1380.0026
LYS 1390.0033
VAL 1400.0024
CYS 1410.0034
ILE 1420.0022
GLY 1430.0032
PRO 1440.0034
GLY 1450.0037
PRO 1460.0061
GLY 1470.0080
LYS 1480.0079
ALA 1490.0086
TYR 1500.0068
LYS 1510.0069
ILE 1520.0063
ILE 1530.0056
SER 1540.0053
LEU 1550.0045
LYS 1560.0044
TYR 1570.0039
THR 1580.0042
ARG 1590.0044
LYS 1600.0049
VAL 1610.0048
CYS 1620.0062
GLY 1630.0061
PRO 1640.0092
GLY 1650.0111
PRO 1660.0146
GLY 1670.0169
GLY 1680.0142
LYS 1690.0149
ALA 1700.0113
TYR 1710.0113
LYS 1720.0097
ILE 1730.0092
ILE 1740.0080
SER 1750.0079
LEU 1760.0073
LYS 1770.0079
TYR 1780.0080
THR 1790.0087
ARG 1800.0090
LYS 1810.0097
VAL 1820.0102
GLY 1830.0106
PRO 1840.0103
GLY 1850.0090
PRO 1860.0069
GLY 1870.0057
ILE 1880.0049
ILE 1890.0034
SER 1900.0034
LEU 1910.0018
LYS 1920.0023
TYR 1930.0008
THR 1940.0011
ARG 1950.0014
LYS 1960.0011
VAL 1970.0019
CYS 1980.0018
ILE 1990.0025
GLN 2000.0027
LEU 2010.0021
GLY 2020.0017
GLY 2030.0014
PRO 2040.0017
GLY 2050.0019
PRO 2060.0017
GLY 2070.0016
ASN 2080.0019
ILE 2090.0022
LYS 2100.0021
THR 2110.0022
ALA 2120.0025
PHE 2130.0025
HIS 2140.0023
CYS 2150.0026
TYR 2160.0029
ALA 2170.0025
ALA 2180.0026
TYR 2190.0030
MET 2200.0029
THR 2210.0027
SER 2220.0028
ILE 2230.0028
LYS 2240.0028
ALA 2250.0027
CYS 2260.0024
ASP 2270.0021
LEU 2280.0039
LYS 2290.0050
LYS 2300.0069
PRO 2310.0090
LEU 2320.0111
MET 2330.0096
GLU 2340.0129
SER 2350.0125
GLY 2360.0115
TRP 2370.0076
SER 2380.0069
ASP 2390.0080
THR 2400.0117
ALA 2410.0167
HIS 2420.0278
GLY 2430.0340
LYS 2440.0485
LYS 2450.0550
SER 2460.0569
LEU 2470.0473
PRO 2480.0506
SER 2490.0507
SER 2500.0396
SER 2510.0283
SER 2520.0240
TYR 2530.0225
SER 2540.0170
TYR 2550.0168
ARG 2560.0121
ARG 2570.0102
LYS 2580.0082
LEU 2590.0072
THR 2600.0083
ASN 2610.0104
PRO 2620.0125
ALA 2630.0152
ASN 2640.0139
LYS 2650.0129
GLU 2660.0100
GLU 2670.0089
SER 2680.0072
ILE 2690.0086
LYS 2700.0096
LYS 2710.0115
GLN 2720.0146
LYS 2730.0172
TYR 2740.0217
SER 2750.0246
TYR 2760.0257
PRO 2770.0161
TRP 2780.0184
GLN 2790.0120
THR 2800.0145
SER 2810.0219
LYS 2820.0428
CYS 2830.0536
PHE 2840.0906
ASP 2880.0789
TYR 2890.0302
GLN 2900.0761
TYR 2910.1099
CYS 2970.0187
ASN 2980.0180
PRO 2990.0157
GLY 3000.0163
LYS 3010.0139
LYS 3020.0122
ASN 3030.0100
THR 3040.0099
ILE 3050.0074
SER 3060.0061
GLY 3070.0048
TYR 3080.0038
LYS 3090.0047
ARG 3100.0044
MET 3110.0032
MET 3120.0033
ALA 3130.0036
THR 3140.0031
LYS 3150.0029
ASP 3160.0028
SER 3170.0031
PHE 3180.0031
GLN 3190.0032
SER 3200.0030
PHE 3210.0031
ASN 3220.0030
LEU 3230.0031
THR 3240.0033
GLU 3250.0034
PRO 3260.0033
HIS 3270.0036
ILE 3280.0035
THR 3290.0038
THR 3300.0039
ASN 3310.0040
LYS 3320.0039
LEU 3330.0036
GLU 3340.0038
TRP 3350.0036
ILE 3360.0037
ASP 3370.0036
PRO 3380.0035
ASP 3390.0036
GLY 3400.0039
ASN 3410.0039
THR 3420.0041
ARG 3430.0045
GLY 3440.0048
GLY 3450.0051
GLY 3460.0054
GLY 10.0018
SER 20.0019
HIS 30.0021
SER 40.0022
MET 50.0024
ARG 60.0023
TYR 70.0024
PHE 80.0022
PHE 90.0024
THR 100.0022
SER 110.0023
VAL 120.0020
SER 130.0020
ARG 140.0019
PRO 150.0019
GLY 160.0018
ARG 170.0019
GLY 180.0022
GLU 190.0024
PRO 200.0023
ARG 210.0023
PHE 220.0024
ILE 230.0024
ALA 240.0025
VAL 250.0024
GLY 260.0025
TYR 270.0023
VAL 280.0023
ASP 290.0020
ASP 300.0019
THR 310.0022
GLN 320.0023
PHE 330.0026
VAL 340.0027
ARG 350.0027
PHE 360.0028
ASP 370.0026
SER 380.0027
ASP 390.0026
ALA 400.0028
ALA 410.0031
SER 420.0033
GLN 430.0032
ARG 440.0033
MET 450.0031
GLU 460.0031
PRO 470.0030
ARG 480.0027
ALA 490.0028
PRO 500.0030
TRP 510.0030
ILE 520.0031
GLU 530.0033
GLN 540.0035
GLU 550.0035
GLY 560.0038
PRO 570.0039
GLU 580.0040
TYR 590.0036
TRP 600.0035
ASP 610.0038
GLY 620.0037
GLU 630.0033
THR 640.0034
ARG 650.0036
LYS 660.0033
VAL 670.0031
LYS 680.0032
ALA 690.0033
HIS 700.0030
SER 710.0028
GLN 720.0030
THR 730.0029
HIS 740.0027
ARG 750.0027
VAL 760.0028
ASP 770.0026
LEU 780.0024
GLY 790.0026
THR 800.0027
LEU 810.0023
ARG 820.0021
GLY 830.0023
TYR 840.0025
TYR 850.0021
ASN 860.0017
GLN 870.0016
SER 880.0015
GLU 890.0015
ALA 900.0015
GLY 910.0016
SER 920.0017
HIS 930.0019
THR 940.0020
VAL 950.0022
GLN 960.0022
ARG 970.0023
MET 980.0023
TYR 990.0024
GLY 1000.0024
CYS 1010.0024
ASP 1020.0022
VAL 1030.0023
GLY 1040.0021
SER 1050.0020
ASP 1060.0023
TRP 1070.0024
ARG 1080.0025
PHE 1090.0026
LEU 1100.0023
ARG 1110.0023
GLY 1120.0024
TYR 1130.0024
HIS 1140.0025
GLN 1150.0023
TYR 1160.0024
ALA 1170.0022
TYR 1180.0021
ASP 1190.0019
GLY 1200.0018
LYS 1210.0019
ASP 1220.0021
TYR 1230.0023
ILE 1240.0025
ALA 1250.0024
LEU 1260.0026
LYS 1270.0025
GLU 1280.0024
ASP 1290.0027
LEU 1300.0028
ARG 1310.0031
SER 1320.0030
TRP 1330.0028
THR 1340.0026
ALA 1350.0026
ALA 1360.0024
ASP 1370.0025
MET 1380.0028
ALA 1390.0027
ALA 1400.0027
GLN 1410.0030
THR 1420.0032
THR 1430.0031
LYS 1440.0031
HIS 1450.0035
LYS 1460.0035
TRP 1470.0034
GLU 1480.0036
ALA 1490.0038
ALA 1500.0038
HIS 1510.0037
VAL 1520.0034
ALA 1530.0032
GLU 1540.0035
GLN 1550.0035
LEU 1560.0031
ARG 1570.0031
ALA 1580.0033
TYR 1590.0032
LEU 1600.0029
GLU 1610.0030
GLY 1620.0032
THR 1630.0032
CYS 1640.0029
VAL 1650.0028
GLU 1660.0031
TRP 1670.0031
LEU 1680.0028
ARG 1690.0028
ARG 1700.0031
TYR 1710.0029
LEU 1720.0027
GLU 1730.0029
ASN 1740.0031
GLY 1750.0028
LYS 1760.0027
GLU 1770.0027
THR 1780.0025
LEU 1790.0023
GLN 1800.0023
ARG 1810.0020
THR 1820.0017
ASP 1830.0017
ALA 1840.0015
PRO 1850.0014
LYS 1860.0015
THR 1870.0014
HIS 1880.0015
MET 1890.0014
THR 1900.0015
HIS 1910.0015
HIS 1920.0014
ALA 1930.0015
VAL 1940.0013
SER 1950.0015
ASP 1960.0018
HIS 1970.0018
GLU 1980.0015
ALA 1990.0014
THR 2000.0011
LEU 2010.0012
ARG 2020.0010
CYS 2030.0010
TRP 2040.0011
ALA 2050.0012
LEU 2060.0015
SER 2070.0017
PHE 2080.0015
TYR 2090.0016
PRO 2100.0015
ALA 2110.0013
GLU 2120.0011
ILE 2130.0008
THR 2140.0005
LEU 2150.0005
THR 2160.0004
TRP 2170.0007
GLN 2180.0009
ARG 2190.0012
ASP 2200.0014
GLY 2210.0011
GLU 2220.0010
ASP 2230.0008
GLN 2240.0008
THR 2250.0006
GLN 2260.0007
ASP 2270.0007
THR 2280.0004
GLU 2290.0003
LEU 2300.0003
VAL 2310.0006
GLU 2320.0008
THR 2330.0010
ARG 2340.0013
PRO 2350.0016
ALA 2360.0018
GLY 2370.0021
ASP 2380.0022
GLY 2390.0021
THR 2400.0018
PHE 2410.0015
GLN 2420.0013
LYS 2430.0010
TRP 2440.0008
ALA 2450.0006
ALA 2460.0007
VAL 2470.0008
VAL 2480.0010
VAL 2490.0013
PRO 2500.0016
SER 2510.0018
GLY 2520.0020
GLN 2530.0018
GLU 2540.0016
GLN 2550.0018
ARG 2560.0016
TYR 2570.0013
THR 2580.0011
CYS 2590.0009
HIS 2600.0007
VAL 2610.0007
GLN 2620.0006
HIS 2630.0009
GLU 2640.0011
GLY 2650.0013
LEU 2660.0011
PRO 2670.0010
LYS 2680.0008
PRO 2690.0006
LEU 2700.0009
THR 2710.0010
LEU 2720.0012
ARG 2730.0014
TRP 2740.0015
GLU 2750.0018
PRO 2760.0019
GLN 2780.0012
ARG 2790.0012
THR 2800.0011
PRO 2810.0011
LYS 2820.0010
ILE 2830.0010
GLN 2840.0011
VAL 2850.0013
TYR 2860.0015
SER 2870.0018
ARG 2880.0020
HIS 2890.0021
PRO 2900.0021
ALA 2910.0022
GLU 2920.0025
ASN 2930.0026
GLY 2940.0029
LYS 2950.0028
SER 2960.0028
ASN 2970.0024
PHE 2980.0022
LEU 2990.0020
ASN 3000.0018
CYS 3010.0015
TYR 3020.0014
VAL 3030.0013
SER 3040.0012
GLY 3050.0012
PHE 3060.0013
HIS 3070.0015
PRO 3080.0017
SER 3090.0017
ASP 3100.0018
ILE 3110.0016
GLU 3120.0016
VAL 3130.0017
ASP 3140.0017
LEU 3150.0018
LEU 3160.0017
LYS 3170.0019
ASN 3180.0018
GLY 3190.0016
GLU 3200.0019
ARG 3210.0020
ILE 3220.0022
GLU 3230.0025
LYS 3240.0026
VAL 3250.0023
GLU 3260.0024
HIS 3270.0021
SER 3280.0021
ASP 3290.0022
LEU 3300.0020
SER 3310.0019
PHE 3320.0017
SER 3330.0015
LYS 3340.0015
ASP 3350.0014
TRP 3360.0017
SER 3370.0014
PHE 3380.0016
TYR 3390.0015
LEU 3400.0017
LEU 3410.0017
TYR 3420.0018
TYR 3430.0021
THR 3440.0023
GLU 3450.0025
PHE 3460.0025
THR 3470.0026
PRO 3480.0024
THR 3490.0025
GLU 3500.0024
LYS 3510.0023
ASP 3520.0021
GLU 3530.0018
TYR 3540.0017
ALA 3550.0014
CYS 3560.0014
ARG 3570.0013
VAL 3580.0013
ASN 3590.0013
HIS 3600.0014
VAL 3610.0015
THR 3620.0013
LEU 3630.0013
SER 3640.0014
GLN 3650.0014
PRO 3660.0012
LYS 3670.0010
ILE 3680.0010
VAL 3690.0010
LYS 3700.0012
TRP 3710.0014
ASP 3720.0014
ARG 3730.0017
ASP 3740.0017
MET 3750.0013
SER 10.0015
GLN 20.0012
PHE 30.0014
ARG 40.0016
VAL 50.0017
SER 60.0018
PRO 70.0020
LEU 80.0023
ASP 90.0026
ARG 100.0026
THR 110.0026
TRP 120.0026
ASN 130.0028
LEU 140.0028
GLY 150.0027
GLU 160.0025
THR 170.0022
VAL 180.0021
GLU 190.0018
LEU 200.0017
LYS 210.0015
CYS 220.0014
GLN 230.0013
VAL 240.0010
LEU 250.0011
LEU 260.0009
SER 270.0008
ASN 280.0005
PRO 290.0004
THR 300.0002
SER 310.0005
GLY 320.0006
CYS 330.0009
SER 340.0012
TRP 350.0014
LEU 360.0017
PHE 370.0020
GLN 380.0022
PRO 390.0025
ARG 400.0027
GLY 410.0030
ALA 420.0030
ALA 430.0028
ALA 440.0026
SER 450.0023
PRO 460.0021
THR 470.0020
PHE 480.0017
LEU 490.0017
LEU 500.0014
TYR 510.0011
LEU 520.0008
SER 530.0005
GLN 540.0003
ASN 550.0005
LYS 560.0008
PRO 570.0010
LYS 580.0012
ALA 590.0015
ALA 600.0018
GLU 610.0020
GLY 620.0023
LEU 630.0021
ASP 640.0021
THR 650.0018
GLN 660.0019
ARG 670.0020
PHE 680.0018
SER 690.0015
GLY 700.0012
LYS 710.0009
ARG 720.0007
LEU 730.0008
GLY 740.0007
ASP 750.0009
THR 760.0010
PHE 770.0011
VAL 780.0013
LEU 790.0015
THR 800.0017
LEU 810.0020
SER 820.0021
ASP 830.0024
PHE 840.0025
ARG 850.0027
ARG 860.0027
GLU 870.0026
ASN 880.0024
GLU 890.0025
GLY 900.0024
TYR 910.0022
TYR 920.0019
PHE 930.0017
CYS 940.0014
SER 950.0012
ALA 960.0009
LEU 970.0007
SER 980.0004
ASN 990.0003
SER 1000.0006
ILE 1010.0008
MET 1020.0010
TYR 1030.0011
PHE 1040.0014
SER 1050.0015
HIS 1060.0018
PHE 1070.0020
VAL 1080.0020
PRO 1090.0023
VAL 1100.0023
PHE 1110.0026
LEU 1120.0028
PRO 1130.0028
ALA 1140.0029
SER 10.0026
GLN 20.0024
PHE 30.0024
ARG 40.0027
VAL 50.0026
SER 60.0028
PRO 70.0029
LEU 80.0032
ASP 90.0034
ARG 100.0033
THR 110.0032
TRP 120.0030
ASN 130.0031
LEU 140.0029
GLY 150.0026
GLU 160.0027
THR 170.0024
VAL 180.0024
GLU 190.0023
LEU 200.0023
LYS 210.0023
CYS 220.0023
GLN 230.0024
VAL 240.0022
LEU 250.0025
LEU 260.0022
SER 270.0023
ASN 280.0021
PRO 290.0020
THR 300.0017
SER 310.0014
GLY 320.0014
CYS 330.0015
SER 340.0014
TRP 350.0016
LEU 360.0017
PHE 370.0020
GLN 380.0022
PRO 390.0025
ARG 400.0028
GLY 410.0029
ALA 420.0027
ALA 430.0024
ALA 440.0024
SER 450.0020
PRO 460.0019
THR 470.0017
PHE 480.0014
LEU 490.0014
LEU 500.0012
TYR 510.0011
LEU 520.0013
SER 530.0013
GLN 540.0014
ASN 550.0011
LYS 560.0009
PRO 570.0010
LYS 580.0007
ALA 590.0009
ALA 600.0010
GLU 610.0010
GLY 620.0012
LEU 630.0013
ASP 640.0014
THR 650.0011
GLN 660.0013
ARG 670.0016
PHE 680.0015
SER 690.0014
GLY 700.0015
LYS 710.0016
ARG 720.0018
LEU 730.0021
GLY 740.0023
ASP 750.0022
THR 760.0022
PHE 770.0020
VAL 780.0020
LEU 790.0019
THR 800.0019
LEU 810.0020
SER 820.0020
ASP 830.0023
PHE 840.0025
ARG 850.0026
ARG 860.0028
GLU 870.0026
ASN 880.0024
GLU 890.0027
GLY 900.0026
TYR 910.0025
TYR 920.0022
PHE 930.0021
CYS 940.0019
SER 950.0017
ALA 960.0016
LEU 970.0014
SER 980.0015
ASN 990.0014
SER 1000.0012
ILE 1010.0014
MET 1020.0015
TYR 1030.0018
PHE 1040.0020
SER 1050.0023
HIS 1060.0025
PHE 1070.0026
VAL 1080.0027
PRO 1090.0029
VAL 1100.0028
PHE 1110.0030
LEU 1120.0032
PRO 1130.0036
ALA 1140.0038

If you find results from this site helpful for your research, please cite one of our papers:

elNémo is maintained by Yves-Henri Sanejouand.
It was developed by Karsten Suhre.
Between 2003 and 2014, it was hosted by IGS (Marseille).
Between 2015 and 2025, it was hosted by US2B (Nantes).
Last modification: april 24th, 2026.